Personal tools

FFCP PHASE1:Hg19::chr17:56410622..56410633,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1692|description=CAGE_peak_at_chr17:56410622..56410633,-|id=chr17:56410622..56410633,-|ontology_enrichment_celltype=CL:0000988!2.37e-44!182;CL:0000037!3.05e-44!172;CL:0000566!3.05e-44!172;CL:0002032!3.91e-38!165;CL:0000837!3.91e-38!165;CL:0000738!1.81e-35!140;CL:0002087!3.71e-31!119;CL:0000542!1.24e-25!53;CL:0000051!1.24e-25!53;CL:0002031!6.27e-25!124;CL:0000838!2.92e-24!52;CL:0000763!1.01e-14!112;CL:0000049!1.01e-14!112;CL:0000084!4.25e-13!25;CL:0000827!4.25e-13!25;CL:0000134!1.16e-12!358;CL:0000945!3.35e-12!24;CL:0000826!3.35e-12!24;CL:0002320!4.12e-12!365;CL:0000219!3.42e-10!390;CL:0000080!4.05e-10!6;CL:0000766!4.50e-08!76;CL:0000048!6.19e-08!430;CL:0000842!1.07e-07!3;CL:0000723!1.28e-07!436;CL:0000034!3.27e-07!444|ontology_enrichment_celltype_v019=CL:0000945;8.80e-21;24!CL:0000236;1.89e-14;13!CL:0000542;5.18e-13;53!CL:0000775;6.56e-08;3|ontology_enrichment_celltype_v019_2=CL:0000945,7.46e-21,24;CL:0000826,7.46e-21,24;CL:0000838,2.05e-18,52;CL:0000542,4.58e-18,53;CL:0000051,4.58e-18,53;CL:0000236,1.41e-13,14;CL:0000738,2.62e-11,136;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177;CL:0002032,1.79e-09,161;CL:0000837,1.79e-09,161;CL:0002087,4.04e-08,115;CL:0000775,6.34e-08,3;CL:0002031,9.03e-08,120|ontology_enrichment_development_v019=CL:0000051;5.18e-13;53|ontology_enrichment_disease=DOID:2531!3.16e-26!51;DOID:0060083!3.16e-26!51;DOID:0060058!1.68e-17!10;DOID:1240!4.72e-17!39;DOID:8692!7.68e-10!31|ontology_enrichment_disease_v019=DOID:0060058;5.92e-09;10|ontology_enrichment_disease_v019_2=DOID:0060058,6.54e-09,10|ontology_enrichment_uberon=UBERON:0002390!9.72e-15!102;UBERON:0003061!9.72e-15!102;UBERON:0002193!1.10e-12!112;UBERON:0000178!5.85e-12!15;UBERON:0000179!5.85e-12!15;UBERON:0000463!5.85e-12!15;UBERON:0002384!2.29e-11!375;UBERON:0004177!4.51e-08!7|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,1.23150884174919,0.944529375764151,0.393364276848904,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0.200544447470142,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0.434377689410233,0,0,0.316462387440884,0,0,0.419317291016752,0,0,0,0.285012743741249,0,0.182664153764634,1.75996244461323,0,0,7.68114400619713,1.60158394814405,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0.32592226663359,0,0,0.334231370655521,0.294605907474837,0,0,0.128091319725675,0,0.328875809207352,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0.602300476311091,0.255973222308837,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0.497992903438899,0.478278818186467,0.199579371432817,0,0.211673582723883,0,0,0.456469358066384,0.783399478865116,0,0,0.642352300414798,1.41259795033733,0,0,0,0,0.333698283423817,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0,1.11443384277478,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0.86494757262552,0.417687798021821,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.645889098360061,0.434523000071005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p@chr17:56410622..56410633,-}}
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr17:56410622..56410633,-
|coexpression_cluster_id=C1692
|description=CAGE_peak_at_chr17:56410622..56410633,-
|id=chr17:56410622..56410633,-
|ontology_enrichment_celltype=CL:0000988!2.37e-44!182;CL:0000037!3.05e-44!172;CL:0000566!3.05e-44!172;CL:0002032!3.91e-38!165;CL:0000837!3.91e-38!165;CL:0000738!1.81e-35!140;CL:0002087!3.71e-31!119;CL:0000542!1.24e-25!53;CL:0000051!1.24e-25!53;CL:0002031!6.27e-25!124;CL:0000838!2.92e-24!52;CL:0000763!1.01e-14!112;CL:0000049!1.01e-14!112;CL:0000084!4.25e-13!25;CL:0000827!4.25e-13!25;CL:0000134!1.16e-12!358;CL:0000945!3.35e-12!24;CL:0000826!3.35e-12!24;CL:0002320!4.12e-12!365;CL:0000219!3.42e-10!390;CL:0000080!4.05e-10!6;CL:0000766!4.50e-08!76;CL:0000048!6.19e-08!430;CL:0000842!1.07e-07!3;CL:0000723!1.28e-07!436;CL:0000034!3.27e-07!444
|ontology_enrichment_celltype_v019=CL:0000945;8.80e-21;24!CL:0000236;1.89e-14;13!CL:0000542;5.18e-13;53!CL:0000775;6.56e-08;3
|ontology_enrichment_celltype_v019_2=CL:0000945,7.46e-21,24;CL:0000826,7.46e-21,24;CL:0000838,2.05e-18,52;CL:0000542,4.58e-18,53;CL:0000051,4.58e-18,53;CL:0000236,1.41e-13,14;CL:0000738,2.62e-11,136;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177;CL:0002032,1.79e-09,161;CL:0000837,1.79e-09,161;CL:0002087,4.04e-08,115;CL:0000775,6.34e-08,3;CL:0002031,9.03e-08,120
|ontology_enrichment_development_v019=CL:0000051;5.18e-13;53
|ontology_enrichment_disease=DOID:2531!3.16e-26!51;DOID:0060083!3.16e-26!51;DOID:0060058!1.68e-17!10;DOID:1240!4.72e-17!39;DOID:8692!7.68e-10!31
|ontology_enrichment_disease_v019=DOID:0060058;5.92e-09;10
|ontology_enrichment_disease_v019_2=DOID:0060058,6.54e-09,10
|ontology_enrichment_uberon=UBERON:0002390!9.72e-15!102;UBERON:0003061!9.72e-15!102;UBERON:0002193!1.10e-12!112;UBERON:0000178!5.85e-12!15;UBERON:0000179!5.85e-12!15;UBERON:0000463!5.85e-12!15;UBERON:0002384!2.29e-11!375;UBERON:0004177!4.51e-08!7
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,1.23150884174919,0.944529375764151,0.393364276848904,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0.200544447470142,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0.434377689410233,0,0,0.316462387440884,0,0,0.419317291016752,0,0,0,0.285012743741249,0,0.182664153764634,1.75996244461323,0,0,7.68114400619713,1.60158394814405,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0.32592226663359,0,0,0.334231370655521,0.294605907474837,0,0,0.128091319725675,0,0.328875809207352,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0.602300476311091,0.255973222308837,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0.497992903438899,0.478278818186467,0.199579371432817,0,0.211673582723883,0,0,0.456469358066384,0.783399478865116,0,0,0.642352300414798,1.41259795033733,0,0,0,0,0.333698283423817,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0,1.11443384277478,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0.86494757262552,0.417687798021821,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.645889098360061,0.434523000071005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0
|short_description=p@chr17:56410622..56410633,-
}}

Latest revision as of 19:17, 25 July 2015

Short description:p@chr17:56410622..56410633, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr17:56410622..56410633, -
Coexpression cluster:C1692_CD19_diffuse_Hodgkin_Neutrophils_Dendritic_colon_Natural
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
2
4
6
8




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data