FFCP PHASE1:Hg19::chr18:5478350..5478363,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23136 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3380 | |||
|TSSclassifier=strong | |||
|UniProt=B2RB02 | |||
|association_with_transcript=0bp_to_AK314438_5end | |||
|cluster_id=chr18:5478350..5478363,- | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_10_at_EPB41L3_5end | |||
|id=chr18:5478350..5478363,- | |||
|ontology_enrichment_celltype=CL:0002564!4.57e-09!3;CL:0002057!1.58e-07!42;CL:0000860!7.79e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0002564;1.71e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,1.60e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.81e-40;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;1.22e-14;3!DOID:3908;2.53e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.22e-14,3;DOID:3908,2.53e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0005174!4.23e-09!5;UBERON:0001137!4.23e-09!5;UBERON:0002242!4.57e-09!3;UBERON:0003068!4.57e-09!3;UBERON:0002328!4.57e-09!3;UBERON:0004880!4.57e-09!3;UBERON:0007023!6.69e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001736;1.81e-40;1!UBERON:0001829;5.15e-21;2!UBERON:0002242;1.71e-14;3!UBERON:0011135;3.10e-09;5!UBERON:0002216;3.10e-09;5!UBERON:0011134;3.10e-09;5!UBERON:0002209;3.10e-09;5!UBERON:0002213;3.10e-09;5!UBERON:0007844;3.10e-09;5!UBERON:0011138;3.10e-09;5!UBERON:0001130;3.10e-09;5!UBERON:0001066;3.10e-09;5!UBERON:0001468;3.10e-09;5!UBERON:0001044;6.55e-08;6!UBERON:0003293;6.55e-08;6!UBERON:0003294;6.55e-08;6!UBERON:0010047;6.55e-08;6!UBERON:0003408;6.55e-08;6!UBERON:0000167;6.55e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,9.91e-41,1;UBERON:0006298,9.91e-41,1;UBERON:0001829,3.81e-21,2;UBERON:0002242,1.60e-14,3;UBERON:0003068,1.60e-14,3;UBERON:0002328,1.60e-14,3;UBERON:0004880,1.60e-14,3;UBERON:0011135,2.97e-09,5;UBERON:0002216,2.97e-09,5;UBERON:0011134,2.97e-09,5;UBERON:0002209,2.97e-09,5;UBERON:0002213,2.97e-09,5;UBERON:0005856,2.97e-09,5;UBERON:0005866,2.97e-09,5;UBERON:0005863,2.97e-09,5;UBERON:0007844,2.97e-09,5;UBERON:0011138,2.97e-09,5;UBERON:0001130,2.97e-09,5;UBERON:0001066,2.97e-09,5;UBERON:0001468,2.97e-09,5;UBERON:0001044,5.92e-08,6;UBERON:0003293,5.92e-08,6;UBERON:0003294,5.92e-08,6;UBERON:0010047,5.92e-08,6;UBERON:0000167,5.92e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.662794751455832,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0,0,0.575384784644301,0.256160706529101,0,0,0,0,0.376484679085209,0,0.224723484445085,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,0.500170521059677,0.271265023699736,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0.83654246567162,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.945668487590378,0.734364233889974,0,76.3764065557919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,1.0529445968896,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,1.83491713361816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.952257725854961,0.258355639344024,0.682821857254437,0.112131862580613,0,0.202117188958219,0,0,0,0.502055437748735,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@EPB41L3 | |||
}} |
Latest revision as of 22:14, 19 September 2015
Short description: | p10@EPB41L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_EPB41L3_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 0bp_to_AK314438_5end |
EntrezGene: | EPB41L3 |
HGNC: | 3380 |
UniProt: | B2RB02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 1.60e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 9.91e-41 | 1 |
submandibular gland primordium | 9.91e-41 | 1 |
major salivary gland | 3.81e-21 | 2 |
nucleus pulposus | 1.60e-14 | 3 |
axial mesoderm | 1.60e-14 | 3 |
notochord | 1.60e-14 | 3 |
chordamesoderm | 1.60e-14 | 3 |
intervertebral cartilage | 2.97e-09 | 5 |
symphysis | 2.97e-09 | 5 |
nonsynovial joint | 2.97e-09 | 5 |
fibrous joint | 2.97e-09 | 5 |
cartilaginous joint | 2.97e-09 | 5 |
developing mesenchymal condensation | 2.97e-09 | 5 |
pre-cartilage condensation | 2.97e-09 | 5 |
cartilaginous condensation | 2.97e-09 | 5 |
cartilage element | 2.97e-09 | 5 |
post-cranial axial skeletal system | 2.97e-09 | 5 |
vertebral column | 2.97e-09 | 5 |
intervertebral disk | 2.97e-09 | 5 |
intervertebral joint | 2.97e-09 | 5 |
saliva-secreting gland | 5.92e-08 | 6 |
gland of oral region | 5.92e-08 | 6 |
gland of foregut | 5.92e-08 | 6 |
oral gland | 5.92e-08 | 6 |
oral cavity | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.22e-14 | 3 |
non-small cell lung carcinoma | 2.53e-09 | 5 |