FFCP PHASE1:Hg19::chr19:13059130..13059148,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5886 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9812 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-439bp_to_M77024_5end | |||
|cluster_id=chr19:13059130..13059148,+ | |||
|description=CAGE_peak_4_at_RAD23A_5end | |||
|id=chr19:13059130..13059148,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;7.13e-08;3!CL:0002521;4.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,7.31e-08,3;CL:0002521,8.90e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;4.93e-07;3!UBERON:0006947;4.93e-07;3!UBERON:0004054;4.93e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.60e-08,114;UBERON:0006947,7.15e-07,3;UBERON:0004054,7.15e-07,3;UBERON:0004151,8.55e-07,3;UBERON:0002190,8.90e-07,3 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.704772020479856,0,0.446961094427288,0.872338524100369,2.53299878168311,5.05375898741465,1.04474251279935,0.245733936501509,0,0.436882744260345,0.527533956456907,0.247532705920093,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0.410623275218653,0.125542639594803,0.305653622991805,0.246301768349837,0.0787107813136792,0.393364276848904,0,0,0,1.50602959389125,2.58827807116751,0,0.284338464974843,0,0,0.401088894940283,0,0.671746422719773,1.6194683300949,2.31818010870768,0.872389432677388,0.755751887377619,0.242584061187816,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0.376484679085209,0.818718450173537,1.34834090667051,0.612167784741805,0.641858054152187,0,0.329851300186716,0.598390972864896,1.27867425159808,0,0.56738522469114,0.622822248995575,1.25624332628372,0,0.868755378820466,0,0,0.949387162322653,0.422510572623884,0.637812899895131,0.628975936525128,0.44931452458598,0.450530678524519,0.64290234678832,0,0.19891667719909,0.547992461293902,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0.205601498999509,0.501559486172034,0.32592226663359,0,0,0.111410456885174,0.589211814949674,0.221533894583621,0,0.512365278902701,0.390178042679635,0.164437904603676,0.829050053357545,0.869409257205157,0,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0.759059076058509,0.318565414324097,0.651083453856419,0,0.150575119077773,0,0,0,0,0,0.534880391567015,0.289648807765598,0,0,0,0.722878304769133,0.50133791063589,0.289693037921647,2.3858578411533,0.973269740605272,0.189069634328136,0.221729397462564,0.175669571386252,0.261958150995425,1.09288586487763,0.741568885568859,0,0.348259474598534,0.132957960518865,0,0,0,1.19257444420023,0,0,0,0,0.275118041940067,1.04497483268405,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,1.89853131913626,0,0,0,0.872188104285069,0,0.25326102332916,0.132409180813219,0,1.06400514659507,0,0,0.74000264525148,0,0.269421344139376,0.326923806226917,0,0,0.468642863667593,0.624320153660641,0.570471821544449,0,0.23486899728753,0,0.140450806702248,0,0.368502951935304,0.206651562351531,1.18800285728205,1.23633464639278,0,0,0,0,0,0.877955241761676,0,0.901428353439581,0.113432183160021,0,0,0.423863802319124,0,0.309157587715317,0,0.744467425326359,0,0.389748020644795,0,0.0920498986422993,0.484938170456436,0,0,0.169560592310488,0,0.545492241181669,0.573609190778008,0,0.132529768321485,0.116193942869518,0.310983165046111,0,0.36497735907583,1.56449532329816,0.643240938192885,1.38134921352481,0,0,0.473227200159376,0.337169380156203,0.482022059766964,1.21323370005633,0.217879444092406,0.237270619111097,0.539325232640658,0,0.38474715694639,0,0,0,0,0,2.94848165003288,0,0,0.122988438543114,0.343135620597051,0.109750285408626,2.24803506515239,0.100528972411631,0.370353780634118,0,0,0,0,0,0.288732895522148,0,0.570762456703795,0.790204397959275,0,0,0.234004265139238,0.148631162288728,0.93733833986777,0.16798212819886,0,0,0,1.15014803749563,0,0.792435906119034,2.07328115540772,1.44119953416961,1.64115163454294,0.380987365753014,5.34783795781589,8.20522130470329,8.55362230113526,0.616964956219941,0.901029173531752,0.571652865261156,0.112131084345361,0,0,0,0,2.535908257668,0.26593811658487,1.04007436911366,0.257207374262142,2.83698264046557,0.532844358032199,0,0,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.199945982364114,1.2162378064119,0.502257091432126,0,0.239624855491583,0,0,0.289562613335158,0.410952645100767,0,0,0.197030760201927,0.431255149719035,0.128343036279748,1.01637849688985,2.60279707715243,0,0,0,0.749007023947182,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.415941723061614,0.356857977594324,0.315404830067869,0.234282829985426,2.70851489754947,2.27407504055985,0,0,0.368738337083406,0.347534457872331,0,0,0.413536052245775,0.647142602455851,0.106727557803444,0.303127571446259,1.66435439510497,0.30239029332968,0.248107807818777,0,0.841980283299221,0.512556597022804,0,0.321707842287215,1.48418066444991,0.462629081407967,0.177561725313127,0.164254312027618,1.55776328755086,0.697262270759755,1.93375119346596,0.601519410909855,2.94659164594868,0.68888668898764,0.182091168006717,1.04899531967539,0.902399225814824,0.15403067420883,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0.215915916102139,3.08454505380579,0.541892875087706,0,0.509752546090077,2.49322802678617,0.671624264166535,2.85037839639715,1.0457418040996,0.256450125116389,0,0.325378394664303,0.721287081534056,1.00726411300178,0,1.14853107599234,3.25030123018261,0,1.16004861950546,0,0.307007349452259,0.275673144969061,0.322260734604821,0.435050081742686,0.170453254832202,0.356128142586949,1.15699440752685,1.15314040419064,0,0.708104465988849,0.929691098594572,0,0,0.308033580176089,1.06461206063404,0.869932992075073,1.29726953372744,0.858749320451947,0,0.316379424718726,0.190630193923825,0,0,1.59101623962968,0.78494864019923,0,0,0.471249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| |||
|short_description=p4@RAD23A | |||
}} |
Latest revision as of 22:47, 15 September 2015
Short description: | p4@RAD23A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RAD23A_5end |
Coexpression cluster: | NA |
Association with transcript: | -439bp_to_M77024_5end |
EntrezGene: | RAD23A |
HGNC: | 9812 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 7.31e-08 | 3 |
subcutaneous fat cell | 8.90e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.60e-08 | 114 |
male genital duct | 7.15e-07 | 3 |
internal male genitalia | 7.15e-07 | 3 |
cardiac chamber | 8.55e-07 | 3 |
subcutaneous adipose tissue | 8.90e-07 | 3 |