FFCP PHASE1:Hg19::chr19:54180020..54180022,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:54180020..54180022,+ | |||
|coexpression_cluster_id=C267 | |||
|description=CAGE_peak_at_chr19:54180020..54180022,+ | |||
|id=chr19:54180020..54180022,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.37e-47!7;CL:0000586!1.37e-47!7;CL:0000342!2.75e-14!1;CL:0002565!2.75e-14!1 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.92e-29;7!CL:0000586;3.92e-29;7!CL:0000083;8.82e-14;4!CL:0002543;1.50e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.65e-29,7;CL:0000586,3.65e-29,7;CL:0000083,8.82e-14,4;CL:0002543,1.57e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!3.25e-15!22;DOID:2994!3.25e-15!22;DOID:1799!4.73e-15!1;DOID:10165!4.73e-15!1;DOID:1798!4.73e-15!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.46e-50;1!DOID:10165;1.46e-50;1!DOID:1798;1.46e-50;1!DOID:1793;8.82e-14;4!DOID:3095;4.64e-10;22!DOID:2994;4.64e-10;22!DOID:170;1.22e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.46e-50,1;DOID:10165,1.46e-50,1;DOID:1798,1.46e-50,1;DOID:1793,8.82e-14,4;DOID:3095,4.53e-10,22;DOID:2994,4.53e-10,22;DOID:170,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002506!2.75e-14!1;UBERON:0001769!2.75e-14!1;UBERON:0003124!1.53e-08!7;UBERON:0000473!1.49e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001638;8.61e-07;9!UBERON:0003920;8.61e-07;9!UBERON:0004582;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001638,8.85e-07,9;UBERON:0003920,8.85e-07,9;UBERON:0004582,8.85e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,1.84451123510448,0.538545866458633,2.17294743844016,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551369397209069,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:54180020..54180022,+ | |||
}} |
Latest revision as of 17:01, 27 July 2015
Short description: | p@chr19:54180020..54180022, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54180020..54180022, + |
Coexpression cluster: | C267_pancreatic_placenta_choriocarcinoma_testicular_teratocarcinoma_chorionic_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.65e-29 | 7 |
germ cell | 3.65e-29 | 7 |
epithelial cell of pancreas | 8.82e-14 | 4 |
vein endothelial cell | 1.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
vein | 8.85e-07 | 9 |
venous blood vessel | 8.85e-07 | 9 |
venous system | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.46e-50 | 1 |
endocrine pancreas cancer | 1.46e-50 | 1 |
pancreatic endocrine carcinoma | 1.46e-50 | 1 |
pancreatic cancer | 8.82e-14 | 4 |
germ cell and embryonal cancer | 4.53e-10 | 22 |
germ cell cancer | 4.53e-10 | 22 |
endocrine gland cancer | 1.22e-09 | 6 |