FFCP PHASE1:Hg19::chr19:55898020..55898032,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:55898020..55898032,+ | |||
|coexpression_cluster_id=C1772 | |||
|description=CAGE_peak_at_chr19:55898020..55898032,+ | |||
|id=chr19:55898020..55898032,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.44e-10!42;CL:0000860!1.64e-10!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.29e-12;33!CL:0002057;2.29e-12;33!CL:0000473;9.65e-09;39!CL:0000234;9.65e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.97e-11,42;CL:0002057,5.97e-11,42;CL:0000473,2.09e-09,48;CL:0000234,2.09e-09,48 | |||
|ontology_enrichment_development_v019=CL:0002057;2.51e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,2.35510576280081,0,1.0007329835313,0.893922188854576,1.74467704820074,7.59899634504932,2.52687949370732,2.61185628199839,1.47440361900905,4.88460817580699,0.436882744260345,1.84636884759917,0.74259811776028,1.65698687863958,1.34465029290355,4.82155622419182,1.46062018077475,1.46379839637152,0.861847406537515,0.612002073732759,2.5076377718247,0.572471974262113,0.821246550437305,1.25542639594803,0.534893840235659,0.903106483949403,0.944529375764151,1.57345710739562,0,0.464448369948228,2.75826367343678,1.204823675113,1.84877005083394,0.619737604642413,0.710846162437108,0.587200878669695,0,2.00544447470142,0.868043482863407,0.895661896959697,1.6194683300949,0.515151135268373,3.19876125315042,4.91238726795452,5.57943340731977,1.85943229524548,3.28934310417461,3.09706370895104,2.8769239232215,3.84241059793651,1.41889337933151,2.41321976515633,3.22742341791913,1.35426486594342,3.20011977222428,5.18521685109907,2.02251136000576,4.89734227793444,1.92557416245656,3.19668562899521,4.94776950280074,4.78712778291916,2.55734850319616,2.61188314765726,3.40431134814684,2.4912889959823,2.51248665256743,3.65038042894141,3.47502151528187,2.42159801053347,1.10483290796269,3.79754864929061,1.05627643155971,1.4882300997553,0.628975936525128,1.79725809834392,1.50176892841506,0.964353520182481,0.855038231223746,2.58591680358817,1.27864907635244,1.75996244461323,1.09227722252426,0.889509253863555,0.853460445133014,0,2.29900975981793,1.98313461835459,0.954053754535364,3.41527781465669,2.34894875748376,1.52909291250092,0,1.12101712596307,0.790152254325231,0.983548850569165,2.35806457649499,3.08402248499264,1.83905144929746,0.32592226663359,1.4203434172042,9.74133642039557,2.45103005147382,2.65145316727353,1.32920336750173,1.35401931882508,1.28091319725675,1.04047478047903,1.97325485524411,0.276350017785848,0.869409257205157,2.37258501059297,3.21048993707656,4.18142095219907,0.566546713487831,0.766440987203842,1.71813722741315,2.53019692019503,1.91139248594458,1.95325036156926,3.8018081777935,1.05402583354441,1.15187950038977,0,2.13099526839615,0.821127996921047,0.604820229674197,2.13952156626806,2.17236605824198,2.43806866313962,4.02420515822182,1.2786256184353,0.722878304769133,1.50401373190767,2.31754430337318,0.795285947051099,0.973269740605272,0.472674085820339,1.77383517970051,1.49319135678314,0.392937226493138,1.09288586487763,1.85392221392215,0,0.696518949197069,1.06366368415092,0.238490624305342,0.571994910780128,0.371457501329565,0.39752481473341,1.72046919021225,1.38856200643038,0.56530794192401,2.51699661725944,3.30141650328081,2.50793959844173,1.03366703667732,0.71153252537342,0,2.41697590265488,0,2.92874469057803,0.367663080345869,2.43042584364528,0.446498641420399,0.673588117878509,1.57656072676651,0,0.949265659568129,2.19842092716489,0,0,0.436094052142534,1.98788780678127,1.2663051166458,0,0.286836620748814,1.77334191099179,2.80338800071154,0,3.7000132262574,0.311211035399766,0.942974704487816,0.817309515567294,1.81628913173918,2.30470369792,0.937285727335186,3.1216007683032,0,1.94283284717341,2.11382097558777,0.647491777472526,0.98315564691574,0.816616685019573,1.71968044236475,1.23990937410919,1.18800285728205,5.93440630268536,0,4.31170885089743,0.336672227908132,1.12606667884768,0,0.877955241761676,0.919463387397059,2.55404700141215,0.226864366320042,0,0.85422955527427,1.48352330811693,0.300091096084402,1.13357782162283,0,0.558350568994769,0.168776332241266,0.584622030967192,0,1.19664868234989,2.10139873864455,0.710019185033229,0.906768884048762,1.01736355386293,1.15956511897978,0.818238361772504,0.286804595389004,2.43947412259191,0.530119073285941,1.62671520017326,1.24393266018445,0.504641701751257,1.45990943630332,4.69348596989448,3.21620469096443,1.38134921352481,3.71494342425583,2.16563844500876,1.53798840051797,2.36018566109342,1.92808823906786,0.55146986366197,0.871517776369625,0.237270619111097,1.34831308160164,1.56977172100277,2.30848294167834,1.4763109092493,1.40241773803446,0.8231480226628,4.41026134156626,1.26755034821831,0.982827216677626,0.590789906681404,0.882926198829301,0.737930631258681,1.88724591328378,0.98775256867763,1.1240175325762,1.80952150340936,1.20364978706088,0.651616610620649,2.07986957055916,4.3299402607582,0.579652024875384,0.234817388471643,0.721832238805369,2.31492756288305,3.04406643575357,3.95102198979638,2.57545848628462,0,0.702012795417713,0.445893486866185,0,1.00789276919316,0.708875486211932,0.358234090811393,0.581267877027924,0.383382679165211,1.47798971368783,0.880484340132261,1.03664057770386,1.29707958075265,0.6312121671319,0.444485260045183,0.381988425558278,0,5.13217338068116,1.13110241973656,0.600686115687835,0.857479297891735,0.448524337381443,0.43596006883328,0.8800594298514,0.387815147273333,7.15312891703765,4.22651376278,1.86156681609409,1.04007436911366,0.257207374262142,0,1.8649552531127,1.28680194292333,0.542621605391443,5.76268235746538,1.62868092146868,1.06617584622764,2.37585561880029,0.602878754119172,0,0.599837947092342,2.43247561282381,2.51128545716063,0,1.19812427745791,2.29723871668228,1.42636905040718,1.88215698667853,1.43833425785268,0.358121926479791,1.79336230389644,0.394061520403854,3.23441362289276,0.77005821767849,0,0,2.31986643833309,0.502548796003046,2.55175500661265,0.749007023947182,5.9832291840805,0.414415513436035,0.981531933753119,4.00136416847742,1.89885516589815,2.07970861530807,1.96271887676878,2.83864347061082,1.7571212248907,0.300946099727719,29.562975527278,7.24311499047534,0,1.84369168541703,0.781952530212746,0.979005787313703,3.0882908142977,0.413536052245775,1.50999940573032,1.06727557803444,0,0,1.5119514666484,0.248107807818777,0.153461973288062,3.08726103876381,1.53766979106841,1.02341449813341,0.804269605718038,2.96836132889982,1.54209693802656,1.9531789784444,0.246381468041427,1.55776328755086,1.62694529843943,1.20859449591622,3.40860999515584,4.51196845785892,0.803701137152247,3.09554985611419,3.67148361886388,0,0.847168708148562,2.35304930753057,2.92278449306521,0.949964660035881,2.27466768141793,1.53084334748864,0.863663664408557,3.08454505380579,1.35473218771926,1.50506932156456,0.509752546090077,0.831076008928724,1.56712328305525,0.438519753291869,0,1.79515087581472,1.31205858279882,0.976135183992909,0.721287081534056,1.09883357782012,0.82509499920588,0.574265537996172,2.60024098414608,1.6068392984416,1.54673149267395,1.54048617114644,1.99554777143968,1.7918754422989,0.751941714077915,1.74020032697074,1.19317278382541,0.712256285173899,1.81813406897076,3.65161127993702,0,1.31505115112215,4.64845549297286,0,0,2.15623506123262,0,0.869932992075073,1.8532421910392,2.28999818787186,0.744316738719335,0.316379424718726,2.09693213316207,1.02359116524534,1.28381696410176,0.318203247925937,7.06453776179307,0.719489830333259,1.92175920815238,1.88499843753098,0.404364963146632,9.5106192703805,3.79132610615083,1.95053495635836,2.43713489631284,2.11300293513511,1.09199929126389,3.95935209470396,1.13008116620243,1.65409603063837,1.99031692572366,5.26141062304515,2.31510213706675,5.24715801637306,0.202910376962704,1.8589409885985,2.25356482025793,0.717056761020258,0.589494246078727,0,1.41904425628239,2.53329162357197,2.96365403663912,0.75894634753143,1.74967360122491,0.192444225451024,3.35151137767894,3.26672954583968,0.659006605437454,1.29151611801369,1.68471475667626,5.32116184244011,1.1486170010348,0.507447609232169,1.52927441428475,0,0.238231775457789,0.411362273086194,0.648473311192717,0,5.55187623405989,1.92283328029452,0,1.96032172784825,0.371606350251437,0.577076851905779,0.640276590135727,0.797131363644112,2.19537308576098,0.766021480529467,5.92686031626872,1.94773164164733,1.40398589056729,1.82587743226554,2.6635582281414,0,2.20079311142084,2.24823305145179,1.41259795033733,0.851692475380653,1.03051603426729,0.614481528616916,0.447352215784832,0.166849141711909,0.586164286206121,1.39203086947621,0,2.16364542780786,0.33307196799782,0,0.935702702041099,0.439524537815682,1.94176834799221,0.445773537109913,1.13654458722565,0.23874448473769,0,0.307160702099232,0.994147647766298,0.281338832821026,0.667852230137435,3.95529298144223,0.211125408127993,0.398495976502139,0.552567831062295,1.25966373927138,0.613612095012929,0.492339221844278,0.311039587661807,0.449341755736634,0.537063524026827,2.55786185113436,1.1837208676432,4.7896618469388,1.11136990144637,0,0.371072392647405,0,0.7812832832557,0.0874599999961957,2.17499872630438,0.910347586283997,1.5255219017566,1.18193840883968,1.72371686620732,1.74962768029953,1.21537496453305,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0.87754158861589,0.435753854075961,0.41827123283581,1.00035336054936,0.341826167541004,1.84451123510448,1.25660702173681,0.977826347298073,0.638002319463839,1.4655614944298,0.533034776018635,5.10966490978682,2.82564461511045,2.16075186470203,0.676786981851542,0.392125068635479,0.167821586975843,0.37950746544837,0.476809736941136,1.05499032264014,0.163232808159148,0,0.216388639742091,0,0.176915129006678,1.22206028986725,0,0.741383633679017,0.626531697032732,0.404406797884062,0.802577647298789,0.468528891450678,1.82454789215666,0,0,1.57833761139756,1.20990716048664,2.44858209304392,0.31593289814244,0.751617097072463,0.829505531177977,0,1.98595173525299,0.941798755221676,0,1.99226682220855,1.38674673013139,3.12407529003236,0.489961987071888,0.174118413160805,1.22308667769421,0.687944129886466,1.16107597546902,1.0232504392066,2.13500188338344,1.45483524732629,0.882561266915003,0.451961481561065,1.78154502040776,0.794858446811959,0.0633107959558787,0.195551382734803,0.400794101257669,1.49417096317547,2.59752492456769,2.3054466744657,0.114536596165916,1.37275998289572,0.864328787928898,0.99402028452346,0.235694034616795,0.271808412147228,0.836822770498666,0.203996435272644,1.15580235960608,0,0.136905378891993,0,0.429765441419957,1.57732412567589,0.279282401272254,0.229160424011684,0.717873024576814,1.59743200399193,1.71690419254628,0.446342914883745,0.268733889946905,1.80149941771202,1.16495949527454,0.472699093843342,0.329663433524666,0.26961417541674,0.393709926058995,0.508039992394707,0.795229689809303,0.681017030557878,2.25054407851027,1.78801267576404,3.32352270423348,0.674921674654501,2.32140586367385,0.182248669974074,1.34173875039706,0.551639951094387,0.262272940674991,0.739202355635845,1.79287339332845,2.68681276247223,2.1440859791201,0.662091970365432,4.32256514013075,5.97299561929084,2.5926644736038,4.57222304153173,1.19730191562487,1.06720276974141,1.36310417428337,0.906496732161005,1.61207457045891,2.65013777824443,0,0.13223260174269,0.342173675768659,0,0.747511887973863,0.157204305099666,4.14239055347196,3.96932817449561,2.17372795087739,1.46151118057075,0,0,0.5013797880454,0.306345576763462,0,0.314108192500469,0.886068179966986,0.488105059607853,0,0,0,0,0.691743174681154,0.74988244777264,0,0.856396000634902,3.76425311517075,0.468334905806882,0.434763085832475,1.34329322598187,0.233713309847224,3.32883516901568,0.568209015825267,1.76097531226803,0.889811221596536,0.915360273587694,1.05861646634267,1.08806040407946,0.591420599958536,0.796483835818512,1.79921244865442,0.465788870628778,0.414706207840855,0.797525143673985,0,0.901545653983311,1.90402606084398,0.813741466409323,0.545545977607678,0.966695013382396,0.928067519756987,2.78667122089031,1.60011105865261,1.37358282073117,2.02049693259551,0,0.57785949122191,0.857766365499703,1.56596575179127,1.13352962756136,2.08370226891451,2.44736704506468,2.14906609297785,1.85280868296583,1.75427239662966,2.29695889729645,2.89371057406372,1.52048196587765,0.76872455576384,1.38172136692479,0.911579868532147,0.414775308455192,1.55888247071511,0.265729680626726,1.14495775979091,1.63804924423206,1.2288645437686,0.633936370075881,1.39991177098451,0.533458648470704,0.688859918643263,0,0.368211900503681,0.699397538597222,0,0.127894371303652,0,0.314531883711793,0.54604819096007,2.37625541935635,2.55089904122019,1.98297222814403,2.79322458986622,1.90802610392051,0.47317047000752,0,4.23211132428821,2.7562092961788,0.0642292250964595,0,0,0.82046545696302,2.01657356977374,0.0691572524642179,0.322951291263702,1.42769420259154,0.196295437002051,0.11796972334774,1.83428598521679,1.73288499225507,1.1441462864015,0,0.795664888465099,0.82731361184183,3.0255760305528,3.90757005616546,1.30953347240711,1.14640342257068,1.03499260351932,0.202612753855184,0,0.206686796501184,0.126831620387814,1.09394961803644,1.09651553371436,0.992422356778588,1.23109871051734,0.383287282918786,0,0,1.21393120847326,0.455324382702595,0.177404740325278,1.38280785066935,0.685952037749674,0,0.394636641377094,0.472775363535873,0.889851215136553,0.470958557103084,0.471346769748006,1.12108865325516,0,0.647782773655864,0,0.142953088353313,0.316027223465453,0.581207126840626,0.695433089210318,1.60342272946051,2.07216164163037,4.4386804044427,1.38251932362818,0,0.354996002191696,0.511280428554946,5.50403165248208,1.60374807980835,0.62041277132864,2.8666168169323,0.447421727191169,0.196300467230486,0.487671699929078,1.94228651156368,0.102662806856247,3.4794432940146,6.31424290976881,1.63757624423474,1.98950775161368,1.54596118010839,0,1.42922671769058,0.603851374266694,0.617393264863557,1.5299169235277,3.76253837089218,0.980593287015622,1.17838273550813,0.588925401344836,0,0.8453114551668,1.69927114687817,0.845855261818682,0.709036767709349,0.599646935549574,0.535661815816973,3.88184358887261,0.481448200135009,2.92134555298607,0.917458566809082,0,0.788857810965923,0.135982980381829,3.05445483238264,1.5870805215462,1.85997509083376,0.924351257262837,2.16313281061895,1.13549782351571,0.874124575709564,0.633492505057185,1.52983244612973,0.801652215796681,0.735159196278759,1.75495277504663,0.757786982182394,1.60778478093707,0.829169439458779,0.103432995861895,1.49263787330687,0.714193294391221,1.93766729508018,0.434523000071005,1.34558235096736,0.445530107947154,1.21270313374932,1.08858373948481,2.39563310759697,0.5388164241167,0.430333232356058,1.99596213927608,0.325613074443898,0.533636729388577,0,0.718601616852695,2.34640942403454,0.122241444182866,0.813792356631477,0,3.62292828463847,3.20568492303233 | |||
|short_description=p@chr19:55898020..55898032,+ | |||
}} |
Latest revision as of 17:28, 27 July 2015
Short description: | p@chr19:55898020..55898032, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:55898020..55898032, + |
Coexpression cluster: | C1772_Osteoblast_lymph_Mesenchymal_Adipocyte_Smooth_skeletal_leiomyoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.97e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.97e-11 | 42 |
defensive cell | 2.09e-09 | 48 |
phagocyte | 2.09e-09 | 48 |