FFCP PHASE1:Hg19::chr19:6071299..6071310,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:6071299..6071310,+ | |||
|description=CAGE_peak_at_chr19:6071299..6071310,+ | |||
|id=chr19:6071299..6071310,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.25e-28!23;CL:0000057!4.89e-15!75;CL:0000055!3.67e-09!180;CL:0000048!3.29e-08!430;CL:0000723!5.88e-08!436;CL:0000034!1.24e-07!444;CL:0002320!3.76e-07!365;CL:0000134!7.41e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.83e-14;3!CL:1000306;2.53e-11;4!CL:0002547;2.53e-11;4!CL:0002620;6.52e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.83e-14,3;CL:1000306,2.53e-11,4;CL:0002547,2.53e-11,4;CL:0000057,5.17e-09,76;CL:0002620,6.75e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.45e-12!5;DOID:450!3.45e-12!5;DOID:66!3.45e-12!5;DOID:423!3.45e-12!5;DOID:0080000!3.45e-12!5;DOID:11722!3.45e-12!5;DOID:2394!3.92e-12!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!1.53e-17!40;UBERON:0002199!3.38e-15!45;UBERON:0002416!3.38e-15!45;UBERON:0002118!4.40e-07!5;UBERON:0004532!4.40e-07!5;UBERON:0002384!9.96e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.53e-11;4!UBERON:0000415;2.53e-11;4!UBERON:0007240;2.53e-11;4!UBERON:0005742;2.53e-11;4!UBERON:0005734;2.53e-11;4!UBERON:0004664;2.53e-11;4!UBERON:0004663;2.53e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,2.53e-11,4;UBERON:0007240,2.53e-11,4;UBERON:0005742,2.53e-11,4;UBERON:0005734,2.53e-11,4;UBERON:0004664,2.53e-11,4;UBERON:0004663,2.53e-11,4;UBERON:0004797,5.08e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31022952033047,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0.211931901159562,0.600182192168805,0.103052529238439,0.772921620136887,0,1.18143432568886,0.0974370051611986,2.27190396819703,0.0920498986422993,0.161646056818812,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,1.53461973288062,0,0,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0.701139929541673,0,0.378806010550178,0,0,0.686520205190771,0.604923695052956,0,0,0.159296767163702,0,0,0,0.265841714557995,0,1.80309130796662,0.380805212168795,0,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:6071299..6071310,+ | |||
}} |
Latest revision as of 18:02, 27 July 2015
Short description: | p@chr19:6071299..6071310, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6071299..6071310, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.83e-14 | 3 |
fibroblast of tunica adventitia of artery | 2.53e-11 | 4 |
fibroblast of the aortic adventitia | 2.53e-11 | 4 |
fibroblast | 5.17e-09 | 76 |
skin fibroblast | 6.75e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
artery wall | 2.53e-11 | 4 |
tunica adventitia of artery | 2.53e-11 | 4 |
adventitia | 2.53e-11 | 4 |
tunica adventitia of blood vessel | 2.53e-11 | 4 |
aorta tunica adventitia | 2.53e-11 | 4 |
aorta wall | 2.53e-11 | 4 |
blood vessel layer | 5.08e-07 | 7 |