FFCP PHASE1:Hg19::chr1:156542388..156542400,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=128239 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20669 | |||
|TSSclassifier=strong | |||
|UniProt=F2Z2E2,Q86VI3 | |||
|association_with_transcript=0bp_to_ENST00000491900,NM_178229,uc001fpf.2,uc009wsb.1_5end | |||
|cluster_id=chr1:156542388..156542400,- | |||
|description=CAGE_peak_3_at_IQGAP3_5end | |||
|id=chr1:156542388..156542400,- | |||
|ontology_enrichment_celltype=CL:0000066!8.83e-17!254;CL:0000548!2.36e-16!679;CL:0000004!2.36e-16!679;CL:0000255!2.36e-16!679;CL:0000012!1.09e-15!682;CL:0002321!1.37e-11!248;CL:0000220!3.49e-11!246;CL:0000055!2.77e-10!180;CL:0000003!1.39e-08!722;CL:0000133!2.06e-08!59;CL:0000333!4.56e-08!41;CL:0000243!2.31e-07!15;CL:0000125!2.31e-07!15;CL:0000030!2.31e-07!15;CL:0000339!2.31e-07!15;CL:0000221!3.60e-07!71;CL:0002319!4.29e-07!25;CL:0000095!8.31e-07!17;CL:0000123!8.31e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000243;3.62e-09;15!CL:0000125;3.62e-09;15!CL:0002319;2.25e-08;25!CL:0000095;6.30e-08;17!CL:0000128;8.92e-08;7!CL:0000126;8.92e-08;7!CL:0000127;8.92e-08;7!CL:0002620;1.53e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,4.82e-09,15;CL:0000125,4.82e-09,15;CL:0000030,4.82e-09,15;CL:0000339,4.82e-09,15;CL:0002319,2.57e-08,25;CL:0000128,5.11e-08,7;CL:0000126,5.11e-08,7;CL:0000127,5.11e-08,7;CL:0002453,5.11e-08,7;CL:0000057,5.33e-08,76;CL:0002620,7.15e-08,23;CL:0000095,8.07e-08,17;CL:0000123,8.07e-08,17;CL:0000333,1.22e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000339;3.62e-09;15 | |||
|ontology_enrichment_disease=DOID:14566!1.62e-24!239;DOID:162!2.30e-24!235;DOID:0050687!1.32e-17!143;DOID:305!1.30e-11!106;DOID:0050686!1.26e-10!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,1.22866968250754,0.697801167972428,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0,0,2.70866327768933,1.22400414746552,1.25381888591235,1.43117993565528,0.958120975510189,1.38096903554283,0.534893840235659,0.328402357799783,0.472264687882075,0,0,0,0.919421224478927,1.50602959389125,0,0.309868802321207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,2.53007406669196,0.50133791063589,0,0,0,0.756278537312543,0.886917589850256,0.263504357079378,0.785874452986276,0,1.11235332835329,0,0,0,0,0,0.371457501329565,2.18638648103376,0.860234595106124,0.694281003215189,0.56530794192401,0,0.550236083880135,1.25396979922086,0.775250277507987,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0,0.735326160691737,0,1.69669483739752,0.44905874525234,1.46394924628319,1.53316637465883,4.74632829784064,0.366403487860815,0,0,0,0,0.633152558322899,0,1.14734648299525,0.709336764396714,0.560677600142307,1.06748995729705,0.24666754841716,0,0.269421344139376,0.490385709340376,0,0,1.87457145467037,0,1.1409436430889,0.149448680551801,1.87895197830024,1.45685649931318,0.98315564691574,0.408308342509787,1.59684612505298,0.103325781175765,0,0.247266929278557,1.82032272387605,0,1.68336113954066,2.00189631795143,0.277064115484183,0.877955241761676,0,0.45071417671979,0.567160915800105,2.51145489964407,0.213557388818567,0,3.00091096084402,0.309157587715317,0.257640540045629,0,1.5189869901714,1.26668106709558,1.26216887122057,0,0.161646056818812,1.42003837006646,1.41052937518696,0.339121184620975,0.386521706326594,0.545492241181669,0,0.853815942907168,0.662648841607426,0.464775771478074,0.518305275076852,0.504641701751257,0.72995471815166,1.56449532329816,0,2.76269842704961,0,0,0.709840800239063,0.337169380156203,0.482022059766964,0.55146986366197,1.08939722046203,0.474541238222193,0.674156540800822,0.98110732562673,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0.441463099414651,0.614942192715568,0.514703430895577,0.109750285408626,2.24803506515239,0.402115889646523,0.0925884451585296,1.62904152655162,2.07986957055916,0,0.231860809950154,0.117408694235822,0,0,0.190254152234598,1.58040879591855,0,0,0,0.148631162288728,0,0.16798212819886,0.283550194484773,0.895585227028483,0.290633938513962,1.53353071666084,0.492663237895943,0.088048434013226,0,0,0,0.571481048629521,1.52795370223311,0,0,1.02827492703324,0,0.285826432630578,2.35475277125258,1.30788020649984,0.7333828582095,0,0,0.845302752556,0,0,1.28603687131071,2.83698264046557,1.5985330740966,0.285955987316295,0,0,0,0.355391948742546,1.58390374586686,0,0,0.299918973546171,0,0,0,0.479249710983165,0,1.42636905040718,0.144781306667579,0.61642896765115,0.358121926479791,0,0,0,0,0.76228387266739,2.60279707715243,1.54657762555539,0.335032530668698,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0.553107505625109,1.21637060255316,0,0.343143423810856,0,0,0,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0.616838775210622,0.177561725313127,1.06765302817952,0,0.348631135379878,0,0,0,0.68888668898764,1.82091168006717,0.131124414959424,1.35359883872224,0.924184045252977,1.56869953835371,0,0.422206515571503,2.27466768141793,1.02056223165909,0.647747748306418,0,0.270946437543853,1.00337954770971,2.03901018436031,0.831076008928724,2.68649705666614,0.657779629937804,0.522870902049801,0.512900250232778,0.328014645699706,0,0,0.640986253728404,1.07262349896764,0,0,1.6068392984416,0.290012154876366,0.308097234229289,0.307007349452259,0.964856007391714,1.07420244868274,0.580066775656914,0.852266274161009,0.267096106940212,0,0,0.510450849978337,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0.744316738719335,0.949138274156178,0,2.04718233049067,0,0.318203247925937,0,0.179872457583315,0.823611089208164,0.824686816419805,0.202182481573316,0,0,0.975267478179181,0,0,0.272999822815972,0,1.13008116620243,0.551365343546124,0,0,0.578775534266688,0,0.405820753925408,0.30982349809975,0.281695602532241,0.860468113224309,0.294747123039363,0.35667105148125,1.41904425628239,0.211107635297664,0,3.03578539012572,1.74967360122491,0.48111056362756,0.670302275535787,1.08890984861323,0.188287601553558,0.86101074534246,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0.980160863924127,1.30062222588003,1.15415370381156,0.142283686696828,0.159426272728822,0.199579371432817,0.383010740264733,0.211673582723883,0,0,0.456469358066384,0.156679895773023,0,0.50787533340481,0.1605880751037,0.403599414382095,0.425846237690326,0,0.614481528616916,1.11838053946208,0.333698283423817,0.390776190804081,0.556812347790485,1.23087398947712,0,0.99921590399346,0,0.748562161632879,0,1.21360521749513,1.00299045849731,0.568272293612826,0.23874448473769,0.296964680832639,0,0,0,0,0,0.422250816255987,0,0.276283915531148,1.0077309914171,1.94310496754094,0.246169610922139,0.311039587661807,1.70749867179921,0.358042349351218,1.02314474045374,0,0,0,0,0,0,1.04171104434093,0.699679999969566,0,0.455173793141999,1.01701460117107,0.236387681767936,1.37897349296586,0.874813840149763,1.73624994933292,0,0,0,0,0,0,0.544692317594951,0.139423744278603,0,0.113942055847001,0.23056390438806,0.718061155278177,0.54323685961004,0,0.183195186803725,0.533034776018635,1.02193298195737,0.784901281975124,0.664846727600626,0.451191321234361,0.392125068635479,0,0.37950746544837,0.317873157960757,1.47698645169619,0.326465616318295,1.13082457147153,0.649165919226273,0,0.0884575645033392,0.611030144933625,0,0,0.208843899010911,0,0,0,0.729819156862664,1.17398771359254,0.485560759068186,0,0,0.61214552326098,0.126373159256976,1.35291077473043,0.518440956986236,0,0.330991955875499,0.313932918407225,0,0.284609546029793,1.10939738410511,0.694238953340524,0.881931576729399,0.957651272384428,0,0.687944129886466,0.774050650312681,0.584714536689484,0.903270027585302,0.193978032976839,0.264768380074501,0,1.23337732182076,1.39100228192093,0,0.586654148204409,0.480952921509202,0,0.999048047910651,0.288180834308212,0.916292769327325,0.857974989309823,0.14405479798815,0.124252535565433,0.235694034616795,0.951329442515298,3.34729108199466,0.713987523454252,1.15580235960608,0,0,2.55493176133945,1.71906176567983,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.164831716762333,0.337017719270924,0.196854963029498,0.338693328263138,0,0,0.160753148465019,0,1.24632101408756,0,0,0,0,0,0.262272940674991,0,0,1.72723677587501,0,0,0,0,0,0.653174720218818,2.39460383124975,0.246277562248017,0,0.339936274560377,0,0,0,0,0.684347351537318,0,0,0.157204305099666,0,0,0.790446527591777,0.121792598380896,0.638341257770182,0,0,0,0,0.785270481251171,0,0,0,0,0,0,1.38348634936231,0.124980407962107,0.909894705249887,0.856396000634902,0.705797459094515,0,0.724605143054126,0.895528817321244,0.467426619694449,0,0.378806010550178,0,0,0,0,0.932623203496683,0.295710299979268,1.11507737014592,0.449803112163605,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0.380805212168795,1.62748293281865,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0.963099152036517,0,1.56596575179127,0.226705925512272,0.463044948647668,0.734210113519403,0.537266523244462,0.308801447160972,0.657852148736121,1.06013487567529,0.38582807654183,0.675769762612291,1.02496607435179,0,0,0,0,0,0,0,0.245772908753719,1.05656061679314,0.19998739585493,0.213383459388282,0,2.83757976783418,1.84105950251841,0,0,0.383683113910955,5.60689019262745,0.314531883711793,0.764467467344097,0.678930119816101,1.2754495206101,0.371807292777007,0.558644917973244,0,2.52357584004011,1.60114149657094,0,0.6124909547064,0,0,0,0,0.252071696221718,0,0,0,0.294443155503077,0.11796972334774,0,0.231051332300676,0.381382095467167,0.690359926060101,0.994581110581374,0.0752103283492573,1.21023041222112,0,1.04762677792569,0.982631505060581,0.591424344868181,0,0,0,0,0,0,0,1.05522746615772,0.127762427639595,0,0,0,0,0.0887023701626388,0.230467975111559,1.02892805662451,0,0,1.65471377237555,0.778619813244484,0,0,1.96190514319652,0,0.863710364874486,1.9110067515482,0,1.26410889386181,0.464965701472501,0.869291361512897,0.801711364730253,0,0.17071847709395,0,0,0.709992004383392,1.02256085710989,0,0.68732060563215,0,0,0,1.17780280338292,0.731507549893617,0,0,0,0,1.40363678077263,0.994753875806841,1.66488127088596,0.22589216407792,1.8689887846723,0.754814217833368,0.0771741581079447,0,0,0,0.471353094203252,0,0,0,0.339854229375634,0.0939839179798536,0.128915775947154,0.299823467774787,0.357107877211315,0.352894871715692,0,0,0,0,0.631086248772738,0,0,0,0.371995018166751,0,0,0.504665699340316,1.63898357945543,1.39368351112581,0.203977659483963,0,0.36757959813938,0.250707539292375,0.530450887527676,2.41167717140561,0,0,0,0.23806443146374,0.645889098360061,0.434523000071005,2.69116470193472,0,0,0,0,0,0,0,0.488419611665847,1.70763753404345,0,0,0,0,1.62758471326295,0,0,0 | |||
|short_description=p3@IQGAP3 | |||
}} |
Latest revision as of 16:26, 17 September 2015
Short description: | p3@IQGAP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IQGAP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000491900, NM_178229, uc001fpf.2, uc009wsb.1_5end |
EntrezGene: | IQGAP3 |
HGNC: | 20669 |
UniProt: | F2Z2E2Q86VI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 4.82e-09 | 15 |
glial cell | 4.82e-09 | 15 |
glioblast | 4.82e-09 | 15 |
glioblast (sensu Vertebrata) | 4.82e-09 | 15 |
neural cell | 2.57e-08 | 25 |
oligodendrocyte | 5.11e-08 | 7 |
macroglial cell | 5.11e-08 | 7 |
astrocyte | 5.11e-08 | 7 |
oligodendrocyte precursor cell | 5.11e-08 | 7 |
fibroblast | 5.33e-08 | 76 |
skin fibroblast | 7.15e-08 | 23 |
neuron associated cell | 8.07e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 8.07e-08 | 17 |
migratory neural crest cell | 1.22e-07 | 41 |