FFCP PHASE1:Hg19::chr9:116327762..116327784,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:116327762..116327784,+
|short_description=p6@RGS3
|description=CAGE_peak_6_at_RGS3_5end
|association_with_transcript=-190bp_to_uc011lxh.1_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5998 | |EntrezGene=5998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9999 | |HGNC=9999 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-190bp_to_uc011lxh.1_5end | |||
|cluster_id=chr9:116327762..116327784,+ | |||
|description=CAGE_peak_6_at_RGS3_5end | |||
|id=chr9:116327762..116327784,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.87e-12!180;CL:0000220!3.10e-10!246;CL:0002321!6.16e-10!248;CL:0002076!9.99e-09!43;CL:0000057!1.18e-08!75;CL:0000066!3.94e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.38e-09;42!CL:0002368;9.15e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.46e-11,42;CL:0000066,1.70e-10,253;CL:0002368,6.80e-09,13;CL:0002321,1.76e-08,250;CL:0000057,4.25e-08,76;CL:0000223,9.74e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!4.10e-11!95;UBERON:0000475!1.20e-09!365;UBERON:0000481!3.64e-08!347;UBERON:0004119!1.78e-07!169;UBERON:0000925!1.78e-07!169;UBERON:0006595!1.78e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,9.53e-11,99;UBERON:0005157,4.06e-08,47 | |||
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| ||
|short_description=p6@RGS3 | |||
}} | }} |
Latest revision as of 07:23, 20 September 2015
Short description: | p6@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RGS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -190bp_to_uc011lxh.1_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.46e-11 | 42 |
epithelial cell | 1.70e-10 | 253 |
respiratory epithelial cell | 6.80e-09 | 13 |
embryonic cell | 1.76e-08 | 250 |
fibroblast | 4.25e-08 | 76 |
endodermal cell | 9.74e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
surface structure | 9.53e-11 | 99 |
epithelial fold | 4.06e-08 | 47 |