FFCP PHASE1:Hg19::chr20:4450824..4450838,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:4450824..4450838,- | |||
|coexpression_cluster_id=C2620 | |||
|description=CAGE_peak_at_chr20:4450824..4450838,- | |||
|id=chr20:4450824..4450838,- | |||
|ontology_enrichment_celltype=CL:0002620!2.10e-16!23;CL:0000057!5.84e-12!75;CL:0002552!1.10e-09!5;CL:0000055!9.21e-09!180;CL:0002601!8.67e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000243;1.27e-16;15!CL:0000125;1.27e-16;15!CL:0000095;5.27e-15;17!CL:0002319;6.56e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.27e-16,15;CL:0000125,1.27e-16,15;CL:0000030,1.27e-16,15;CL:0000339,1.27e-16,15;CL:0000095,5.27e-15,17;CL:0000123,5.27e-15,17;CL:0002319,6.56e-11,25;CL:0000333,2.95e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.49e-25;10!UBERON:0009847;3.27e-23;3!UBERON:0003353;3.27e-23;3!CL:0000339;1.27e-16;15 | |||
|ontology_enrichment_disease=DOID:171!1.16e-08!10;DOID:3093!1.57e-07!11 | |||
|ontology_enrichment_disease_v019=DOID:3093;5.14e-23;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,5.14e-23,11 | |||
|ontology_enrichment_uberon=UBERON:0003102!8.49e-12!95;UBERON:0002199!1.35e-11!45;UBERON:0002416!1.35e-11!45;UBERON:0002097!5.72e-11!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;2.47e-07;11!UBERON:0010147;2.47e-07;11!UBERON:0003937;7.92e-07;12!UBERON:0005399;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,2.47e-07,11;UBERON:0010147,2.47e-07,11;UBERON:0009846,2.47e-07,11;UBERON:0003353,2.47e-07,11;UBERON:0004902,2.47e-07,11;UBERON:0003820,2.47e-07,11;UBERON:0009847,2.47e-07,11;UBERON:0003937,7.92e-07,12;UBERON:0005399,7.92e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0.179389635688862,0,0,0,0,0.515281080091258,0,0.337552664482532,0.194874010322397,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.951329442515298,1.77824838730966,5.6099019699977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78741985211799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0.247871528518004,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0,0,0,2.22462803784138,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr20:4450824..4450838,- | |||
}} |
Latest revision as of 14:32, 28 July 2015
Short description: | p@chr20:4450824..4450838, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:4450824..4450838, - |
Coexpression cluster: | C2620_glioblastoma_peripheral_prostate_tridermal_neuroepithelioma_tubular_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.27e-16 | 15 |
glial cell | 1.27e-16 | 15 |
glioblast | 1.27e-16 | 15 |
glioblast (sensu Vertebrata) | 1.27e-16 | 15 |
neuron associated cell | 5.27e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 5.27e-15 | 17 |
neural cell | 6.56e-11 | 25 |
migratory neural crest cell | 2.95e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 2.47e-07 | 11 |
male accessory sex gland | 2.47e-07 | 11 |
embryonic cloacal epithelium | 2.47e-07 | 11 |
epithelium of hindgut | 2.47e-07 | 11 |
urogenital sinus epithelium | 2.47e-07 | 11 |
prostate bud | 2.47e-07 | 11 |
prostate field | 2.47e-07 | 11 |
sex gland | 7.92e-07 | 12 |
male reproductive gland | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 5.14e-23 | 11 |