FFCP PHASE1:Hg19::chr22:31487784..31487801,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr22:31487784..31487801,+ | |||
|coexpression_cluster_id=C727 | |||
|description=CAGE_peak_at_chr22:31487784..31487801,+ | |||
|id=chr22:31487784..31487801,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000317;1.46e-13;2!CL:1000448;1.46e-13;2!CL:0002308;1.46e-13;2!CL:0002140;1.46e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.55e-13,2;CL:1000448,1.55e-13,2;CL:0002308,1.55e-13,2;CL:0002140,1.55e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.72e-26;1!UBERON:0009847;1.74e-09;3!UBERON:0003353;1.74e-09;3!UBERON:0006603;8.67e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.83e-11!115;UBERON:0003101!1.68e-09!22;UBERON:0000079!1.68e-09!22;UBERON:0003064!7.59e-08!37;UBERON:0001046!1.34e-07!19;UBERON:0003937!1.38e-07!12;UBERON:0005399!1.38e-07!12;UBERON:0006947!2.42e-07!3;UBERON:0004054!2.42e-07!3;UBERON:0006554!7.78e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0001255;8.28e-14;2!UBERON:0001556;8.28e-14;2!UBERON:0002419;1.46e-13;2!UBERON:0007771;1.46e-13;2!UBERON:0003297;1.46e-13;2!UBERON:0001821;1.46e-13;2!UBERON:0003487;1.46e-13;2!UBERON:0001820;1.46e-13;2!UBERON:0001155;3.95e-12;9!UBERON:0000059;4.22e-10;11!UBERON:0001043;1.47e-09;3!UBERON:0004921;2.26e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001255,7.30e-14,2;UBERON:0001556,7.30e-14,2;UBERON:0002419,1.55e-13,2;UBERON:0007771,1.55e-13,2;UBERON:0003297,1.55e-13,2;UBERON:0001821,1.55e-13,2;UBERON:0003487,1.55e-13,2;UBERON:0001820,1.55e-13,2;UBERON:0005089,1.55e-13,2;UBERON:0005088,1.55e-13,2;UBERON:0001155,4.18e-12,9;UBERON:0000059,4.42e-10,11;UBERON:0001043,1.41e-09,3;UBERON:0009143,1.41e-09,3;UBERON:0000162,4.66e-08,14;UBERON:0001353,4.66e-08,14;UBERON:0000163,4.66e-08,14;UBERON:0006866,4.66e-08,14;UBERON:0000164,4.66e-08,14;UBERON:0000931,4.66e-08,14;UBERON:0007023,6.48e-08,114;UBERON:0004122,1.40e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0.55597265731176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0.311039587661807,0,0,0,3.64980600856654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,2.07765697960252,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,3.18447232212021,4.888241159469,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.34945333648406,0,0,0,0,2.13375836274523,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0,0,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72684804271131,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0.307988420568741,0,0,0,0.198950775161368,0,0,0,0,0.385870790539723,0,0.470317296361523,3.18692818280077,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.682008283964155,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0.813792356631477,0,0,0 | |||
|short_description=p@chr22:31487784..31487801,+ | |||
}} |
Latest revision as of 20:15, 28 July 2015
Short description: | p@chr22:31487784..31487801, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:31487784..31487801, + |
Coexpression cluster: | C727_colon_smooth_rectum_duodenum_bladder_esophagus_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.55e-13 | 2 |
epithelial cell of sweat gland | 1.55e-13 | 2 |
epithelial cell of skin gland | 1.55e-13 | 2 |
acinar cell of sebaceous gland | 1.55e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder | 7.30e-14 | 2 |
lower urinary tract | 7.30e-14 | 2 |
skin gland | 1.55e-13 | 2 |
epidermis gland | 1.55e-13 | 2 |
gland of integumental system | 1.55e-13 | 2 |
sebaceous gland | 1.55e-13 | 2 |
skin sebaceous gland | 1.55e-13 | 2 |
sweat gland | 1.55e-13 | 2 |
sweat gland placode | 1.55e-13 | 2 |
sebaceous gland placode | 1.55e-13 | 2 |
colon | 4.18e-12 | 9 |
large intestine | 4.42e-10 | 11 |
esophagus | 1.41e-09 | 3 |
esophageal region | 1.41e-09 | 3 |
cloaca | 4.66e-08 | 14 |
anal region | 4.66e-08 | 14 |
embryonic cloaca | 4.66e-08 | 14 |
terminal part of digestive tract | 4.66e-08 | 14 |
primitive urogenital sinus | 4.66e-08 | 14 |
proctodeum | 4.66e-08 | 14 |
adult organism | 6.48e-08 | 114 |
genitourinary system | 1.40e-07 | 15 |