FFCP PHASE1:Hg19::chr2:15732443..15732474,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:15732443..15732474,- | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_at_chr2:15732443..15732474,- | |||
|id=chr2:15732443..15732474,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;8.03e-23;3!CL:1000428;8.03e-23;3!CL:0002559;4.11e-14;5!CL:0002363;1.51e-09;2!CL:0002596;1.51e-09;2!CL:0000632;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,6.44e-23,3;CL:1000428,6.44e-23,3;CL:0002559,3.60e-14,5;CL:0000333,1.05e-09,41;CL:0002596,1.12e-09,2;CL:0002363,2.02e-09,2;CL:0000008,2.02e-09,2;CL:0000133,7.77e-07,59;CL:0000632,8.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000008;1.51e-09;2!UBERON:0003056;6.50e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;8.03e-23;3!UBERON:0001992;8.03e-23;3!UBERON:0002073;4.11e-14;5!UBERON:0003566;1.51e-09;2!UBERON:0001777;1.51e-09;2!UBERON:0005396;1.51e-09;2!UBERON:0002067;2.96e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,6.44e-23,3;UBERON:0001992,6.44e-23,3;UBERON:0002073,3.60e-14,5;UBERON:0005086,3.60e-14,5;UBERON:0005396,1.12e-09,2;UBERON:0003566,2.02e-09,2;UBERON:0001777,2.02e-09,2;UBERON:0005085,7.64e-09,31;UBERON:0002067,2.75e-08,9;UBERON:0004016,2.75e-08,9;UBERON:0010083,2.75e-08,9 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0.919421224478927,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0.671746422719773,0.32389366601898,0.257575567634187,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0.22465726229299,0,0,0.570025487482497,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0.596287222100115,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0.760272105718513,0.488124115096339,0,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0,0.366403487860815,0,0,0.436094052142534,0,0,0.264818361626438,0.573673241497627,0,0,0,0,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.619954687054593,0,0.247266929278557,0,0,0,0.375355559615893,0.277064115484183,0,0,0.45071417671979,0,0.179389635688862,0.640672166455702,0.635795703478686,0,0.103052529238439,0.515281080091258,0.18611685633159,0.337552664482532,0.194874010322397,0.757301322732344,0.184099797284599,0.484938170456436,0.710019185033229,0.10075209822764,0.339121184620975,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0,0,1.56449532329816,0,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,1.03993478527958,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0.492434012174795,0.468008530278475,0.297262324577456,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0.144119953416961,0.6312121671319,0.126995788584338,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,1.04007436911366,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0,0,0.413536052245775,0,0,0.303127571446259,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,1.54227252690289,0,0.501689773854853,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0.206082023295445,0,0.165018999841176,0,0,0,0.096670718292122,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0.255679882248303,0,0.165284915360978,0,0.255225424989168,0.2023155617111,0,0.31481234683064,0,0.308033580176089,0,0,0,0.286249773483982,0,0.632758849437452,0,0,0,0.95460974377781,1.56989728039846,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0.970884173996107,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0.306806047506464,0,0,0.0898683511473268,0,0,0,0,0,0,0.278304294485554,0,0.260427761085233,0.174919999992391,0,0.227586896570999,0.254253650292766,0.236387681767936,2.41320361269025,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0.32681539055697,0,0.0769502585037971,0,0.46112780877612,0.269272933229316,0,0,0.274792780205587,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0,0.282706142867882,0,0,0.265372693510018,0,0,0.247127877893006,0,0.202203398942031,0,0,0.182454789215666,0,0.728341138602278,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,1.19472429772959,0,0.277349346026277,0,0.0979923974143777,0.0870592065804026,0.52418000472609,0.171986032471617,0,0.146178634172371,0.328461828212837,0,0.0882561266915003,0,0,0,0.126621591911757,0.586654148204409,0,0,0,0,0,0,0.14405479798815,0,0,0.271808412147228,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0.223171457441873,0.201550417460179,0,0,0.236349546921671,0.247247575143499,0.404421263125109,0.0984274815147488,0,0,0.272406812223151,0.160753148465019,0,0,0.2249738915515,0,0,0,0,0.209818352539992,0.211200673038813,0.179287339332845,0.383830394638891,0,0,0.25426853765475,0,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0.226624183040251,0,0,0,0.13223260174269,0.171086837884329,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.1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| |||
|short_description=p@chr2:15732443..15732474,- | |||
}} |
Latest revision as of 01:37, 29 July 2015
Short description: | p@chr2:15732443..15732474, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:15732443..15732474, - |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 6.44e-23 | 3 |
stem cell of epidermis | 6.44e-23 | 3 |
hair follicle cell | 3.60e-14 | 5 |
migratory neural crest cell | 1.05e-09 | 41 |
smooth muscle cell of the carotid artery | 1.12e-09 | 2 |
keratocyte | 2.02e-09 | 2 |
migratory cranial neural crest cell | 2.02e-09 | 2 |
neurectodermal cell | 7.77e-07 | 59 |
hepatic stellate cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 6.44e-23 | 3 |
papillary layer of dermis | 6.44e-23 | 3 |
hair follicle | 3.60e-14 | 5 |
hair follicle placode | 3.60e-14 | 5 |
carotid artery segment | 1.12e-09 | 2 |
head connective tissue | 2.02e-09 | 2 |
substantia propria of cornea | 2.02e-09 | 2 |
ectodermal placode | 7.64e-09 | 31 |
dermis | 2.75e-08 | 9 |
dermatome | 2.75e-08 | 9 |
future dermis | 2.75e-08 | 9 |