FFCP PHASE1:Mm9::chr11:102964329..102964340,+: Difference between revisions
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{{FFCP|EntrezGene=67131|HGNC=|MCL_coexpression_id=24|UniProt=E0CXU7|association_with_transcript=0bp_to_ENSMUST00000129870_5end|description=CAGE_peak_6_at_Acbd4_5end|id=chr11:102964329..102964340,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,5.22e-22,6;CL:0000677,5.22e-22,6;CL:0000584,5.22e-22,6;CL:0000075,8.77e-19,7;CL:0002563,1.78e-14,9;CL:0002251,1.78e-14,9;CL:0000682,6.48e-12,3;CL:0000066,1.12e-10,25;CL:0000473,1.55e-08,7;CL:0002076,1.97e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.31e-08!15;UBERON:0001242!3.87e-07!13;UBERON:0000060!3.87e-07!13;UBERON:0001262!3.87e-07!13;UBERON:0004786!3.87e-07!13;UBERON:0003929!6.18e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.72e-18,15;UBERON:0003350,1.78e-14,9;UBERON:0004808,1.78e-14,9;UBERON:0001277,1.78e-14,9;UBERON:0001242,4.38e-13,13;UBERON:0001262,4.38e-13,13;UBERON:0004786,4.38e-13,13;UBERON:0000485,9.87e-12,11;UBERON:0004923,5.49e-11,24;UBERON:0001962,2.67e-08,2;UBERON:0001961,2.67e-08,2;UBERON:0001744,2.67e-08,2|phase1_expression=0.160148847104794,9.77131141390211,9.09998478779072,5.44435580352294,4.00716583957078,1.51091344720701,2.10251376535973,0.258246646883153,0.563154888606667,1.87251621057595,0.171217968225505,0.239316476986009,1.02720437958723,0.437102012094987,0,1.21485160433896,0,0.630924330716475,0.548457734422955,2.12194825899015,0.0850432901510698,0,0,3.03985603307473,2.2940928106717,7.46501553349526,2.58457197695445,4.95583835177545,0.570070258369122,1.26015064879965,0.886922042621219,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0,0,0,0,0,0,0,0,1.09843091367236,0.58328969722285,0.279972843250725,0,0.671130424230945,0,1.00828139742739,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,0.988866362566974,0,0.898800331555214,1.15265491596466,0.103689612308478,0,0.210324961351382,0.285650984403804,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0.0914876436024097,0.52091337055676,0,0,0,0,0,0,0.302904773332736,0,0.289864488701678,0.860423876981386,0,0.539703191637817,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0.445326417194474,0,0,0,0,0,1.13099932196708,0,1.3013942122792,0,0,0,0.484875253135222,0,0.585561594023094,0,0.510914110417183,0,0,0,0.449371918214468,0,0.376963056338593,0.173824320192276,0.511430914660661,0,0,0.101839363850316,0.746441823660558,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0,0.210289948564127,0.205809224758569,0.991256348951394,0.264450566663544,0.213288250535234,0,0,0,0,0,0.949058123089023,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0.590440591918409,0.156998727841375,0.123397163921801,0,0.166845105716094,0.589676985339609,0.224862112384854,0.811440485554012,0.964708639009667,0.50925170356284,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.369506380333209,0.189491411770485,0,0,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,1.10374698521893,0.160550589987792,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0.321321316421807,0.141940085208269,0,0.325773918707152,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.32977250588296,0.322928853391811,1.08563264870681,0.358117032009409,0.328281799490123,0.582961673259701,0,0,0,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,0,0.406638934253697,0,0,0,0.134864346384821,0.165306911450672,0.26175594198403,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0.117357238645754,0.2604087696879,0,0.241584120826006,0.288030006257865,0.632022241256357,0.202725215290164,0,0.129920822977795,0.358053391334963,0.39736270956253,0.240390899039938,0.147689527174577,0.302899349844443,0.381034033274999,0.604957110821043,0.682205165178267,1.44317762460494,0.701261413089414,0,0.221985953374065,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0.51776031175182,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0.565879024158229,0.280924522409647,0.128050304809739,0.229741875822453,0,0.463537303779422,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.282328141245992,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.464810523557898,0.192906610981141,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p6@Acbd4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67131 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=E0CXU7 | |||
|association_with_transcript=0bp_to_ENSMUST00000129870_5end | |||
|cluster_id=chr11:102964329..102964340,+ | |||
|description=CAGE_peak_6_at_Acbd4_5end | |||
|id=chr11:102964329..102964340,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.22e-22,6;CL:0000677,5.22e-22,6;CL:0000584,5.22e-22,6;CL:0000075,8.77e-19,7;CL:0002563,1.78e-14,9;CL:0002251,1.78e-14,9;CL:0000682,6.48e-12,3;CL:0000066,1.12e-10,25;CL:0000473,1.55e-08,7;CL:0002076,1.97e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.31e-08!15;UBERON:0001242!3.87e-07!13;UBERON:0000060!3.87e-07!13;UBERON:0001262!3.87e-07!13;UBERON:0004786!3.87e-07!13;UBERON:0003929!6.18e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.72e-18,15;UBERON:0003350,1.78e-14,9;UBERON:0004808,1.78e-14,9;UBERON:0001277,1.78e-14,9;UBERON:0001242,4.38e-13,13;UBERON:0001262,4.38e-13,13;UBERON:0004786,4.38e-13,13;UBERON:0000485,9.87e-12,11;UBERON:0004923,5.49e-11,24;UBERON:0001962,2.67e-08,2;UBERON:0001961,2.67e-08,2;UBERON:0001744,2.67e-08,2 | |||
|phase1_expression=0.160148847104794,9.77131141390211,9.09998478779072,5.44435580352294,4.00716583957078,1.51091344720701,2.10251376535973,0.258246646883153,0.563154888606667,1.87251621057595,0.171217968225505,0.239316476986009,1.02720437958723,0.437102012094987,0,1.21485160433896,0,0.630924330716475,0.548457734422955,2.12194825899015,0.0850432901510698,0,0,3.03985603307473,2.2940928106717,7.46501553349526,2.58457197695445,4.95583835177545,0.570070258369122,1.26015064879965,0.886922042621219,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0,0,0,0,0,0,0,0,1.09843091367236,0.58328969722285,0.279972843250725,0,0.671130424230945,0,1.00828139742739,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,0.988866362566974,0,0.898800331555214,1.15265491596466,0.103689612308478,0,0.210324961351382,0.285650984403804,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0.0914876436024097,0.52091337055676,0,0,0,0,0,0,0.302904773332736,0,0.289864488701678,0.860423876981386,0,0.539703191637817,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0.445326417194474,0,0,0,0,0,1.13099932196708,0,1.3013942122792,0,0,0,0.484875253135222,0,0.585561594023094,0,0.510914110417183,0,0,0,0.449371918214468,0,0.376963056338593,0.173824320192276,0.511430914660661,0,0,0.101839363850316,0.746441823660558,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0,0.210289948564127,0.205809224758569,0.991256348951394,0.264450566663544,0.213288250535234,0,0,0,0,0,0.949058123089023,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0.590440591918409,0.156998727841375,0.123397163921801,0,0.166845105716094,0.589676985339609,0.224862112384854,0.811440485554012,0.964708639009667,0.50925170356284,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.369506380333209,0.189491411770485,0,0,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,1.10374698521893,0.160550589987792,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0.321321316421807,0.141940085208269,0,0.325773918707152,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.32977250588296,0.322928853391811,1.08563264870681,0.358117032009409,0.328281799490123,0.582961673259701,0,0,0,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,0,0.406638934253697,0,0,0,0.134864346384821,0.165306911450672,0.26175594198403,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0.117357238645754,0.2604087696879,0,0.241584120826006,0.288030006257865,0.632022241256357,0.202725215290164,0,0.129920822977795,0.358053391334963,0.39736270956253,0.240390899039938,0.147689527174577,0.302899349844443,0.381034033274999,0.604957110821043,0.682205165178267,1.44317762460494,0.701261413089414,0,0.221985953374065,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0.51776031175182,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0.565879024158229,0.280924522409647,0.128050304809739,0.229741875822453,0,0.463537303779422,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.282328141245992,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.464810523557898,0.192906610981141,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p6@Acbd4 | |||
}} |
Latest revision as of 18:58, 26 September 2015
Short description: | p6@Acbd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Acbd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000129870_5end |
EntrezGene: | Acbd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.22e-22 | 6 |
gut absorptive cell | 5.22e-22 | 6 |
enterocyte | 5.22e-22 | 6 |
columnar/cuboidal epithelial cell | 8.77e-19 | 7 |
intestinal epithelial cell | 1.78e-14 | 9 |
epithelial cell of alimentary canal | 1.78e-14 | 9 |
M cell of gut | 6.48e-12 | 3 |
epithelial cell | 1.12e-10 | 25 |
defensive cell | 1.55e-08 | 7 |
endo-epithelial cell | 1.97e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.72e-18 | 15 |
epithelium of mucosa | 1.78e-14 | 9 |
gastrointestinal system epithelium | 1.78e-14 | 9 |
intestinal epithelium | 1.78e-14 | 9 |
intestinal mucosa | 4.38e-13 | 13 |
wall of intestine | 4.38e-13 | 13 |
gastrointestinal system mucosa | 4.38e-13 | 13 |
simple columnar epithelium | 9.87e-12 | 11 |
organ component layer | 5.49e-11 | 24 |
gut-associated lymphoid tissue | 2.67e-08 | 2 |
mucosa-associated lymphoid tissue | 2.67e-08 | 2 |
lymphoid tissue | 2.67e-08 | 2 |