FFCP PHASE1:Mm9::chr11:3430049..3430068,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1564|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:3430049..3430068,-|id=chr11:3430049..3430068,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.39e-17,47;UBERON:0000162,2.33e-11,3;UBERON:0001353,2.33e-11,3;UBERON:0000163,2.33e-11,3;UBERON:0006866,2.33e-11,3;UBERON:0001046,2.33e-11,3;UBERON:0000164,2.33e-11,3;UBERON:0000931,2.33e-11,3;UBERON:0000160,1.18e-10,31;UBERON:0000474,1.06e-09,9;UBERON:0004921,6.43e-08,114;UBERON:0003100,7.06e-08,11;UBERON:0001007,1.03e-07,116;UBERON:0001555,1.03e-07,116;UBERON:0007026,1.03e-07,116;UBERON:0004119,1.62e-07,118;UBERON:0000925,1.62e-07,118;UBERON:0006595,1.62e-07,118;UBERON:0010147,2.45e-07,2;UBERON:0003937,2.45e-07,2;UBERON:0005399,2.45e-07,2;UBERON:0000945,2.69e-07,16;UBERON:0010039,2.69e-07,16;UBERON:0003134,3.56e-07,8;UBERON:0003975,4.13e-07,5;UBERON:0000161,5.70e-07,5;UBERON:0004122,5.70e-07,5|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.695036658406197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0.135005938331691,0,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0.247194967734374,0.578397427679647,0,0,0,0,0,0,0.209446706813455,1.02182822083437,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0.248813941220186,0,0.420883711772948,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0,0.393528463494808,0,0,0,0.116765342367169,0,0,0,0,0,0.268412837520744,0,0,0,0.528901133327089,0,0,0,0.605050573870028,1.11189021922435,1.52180500890047,1.42358718463353,1.81168850196412,2.01068167040216,2.78539060857611,2.33956904542944,0.898819408654221,1.72910439899755,1.1948476395262,0,0,0,0,0,0.210407459670956,0.0632365371242573,0.295220295959204,0,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0.780534591431195,0,0.664394068946325,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0.178065603667255,0.162886959353576,5.93892442701128,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,1.58018378967908,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,2.64634077665954,0.16488625294148,0.161464426695906,0.241251699712623,0,0.164140899745061,2.33184669303881,0,0.170870880797853,0,0,0.188368457004691,0,0.228778173206523,0,0,0.138199973804424,2.86401185404534,0,0,0,0.836353184057875,1.74690050996942,2.83215127408124,3.88471241909079,4.97336289769656,1.42576470620972,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0.314578033277133,0,0,0,0,0,0.129920822977795,0,0,0.360586348559907,0,0,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,7.53439416725543,10.322536149815,4.57879060668163,2.78678892802786,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.419226325255965,0,0.222246727801615,0.206035057238894,0,0.505394423527595,0,0.188626341386076,0.468207537349412,0.192075457214608,0.459483751644906,0,0.231768651889711,0.38581844092741,0,0.588795680537589,0,0.177475806159338,0.238436189947321,0.290692833264657,0.564656282491984,0,0,0.526139422875686,0.407412341537585,0.561142271657738,0.711810108745045,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0.382576664137687,0,0|short_description=p@chr11:3430049..3430068,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1564 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:3430049..3430068,- | |||
|description=CAGE_peak_at_chr11:3430049..3430068,- | |||
|id=chr11:3430049..3430068,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.39e-17,47;UBERON:0000162,2.33e-11,3;UBERON:0001353,2.33e-11,3;UBERON:0000163,2.33e-11,3;UBERON:0006866,2.33e-11,3;UBERON:0001046,2.33e-11,3;UBERON:0000164,2.33e-11,3;UBERON:0000931,2.33e-11,3;UBERON:0000160,1.18e-10,31;UBERON:0000474,1.06e-09,9;UBERON:0004921,6.43e-08,114;UBERON:0003100,7.06e-08,11;UBERON:0001007,1.03e-07,116;UBERON:0001555,1.03e-07,116;UBERON:0007026,1.03e-07,116;UBERON:0004119,1.62e-07,118;UBERON:0000925,1.62e-07,118;UBERON:0006595,1.62e-07,118;UBERON:0010147,2.45e-07,2;UBERON:0003937,2.45e-07,2;UBERON:0005399,2.45e-07,2;UBERON:0000945,2.69e-07,16;UBERON:0010039,2.69e-07,16;UBERON:0003134,3.56e-07,8;UBERON:0003975,4.13e-07,5;UBERON:0000161,5.70e-07,5;UBERON:0004122,5.70e-07,5 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.695036658406197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0.135005938331691,0,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0.247194967734374,0.578397427679647,0,0,0,0,0,0,0.209446706813455,1.02182822083437,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0.248813941220186,0,0.420883711772948,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0,0.393528463494808,0,0,0,0.116765342367169,0,0,0,0,0,0.268412837520744,0,0,0,0.528901133327089,0,0,0,0.605050573870028,1.11189021922435,1.52180500890047,1.42358718463353,1.81168850196412,2.01068167040216,2.78539060857611,2.33956904542944,0.898819408654221,1.72910439899755,1.1948476395262,0,0,0,0,0,0.210407459670956,0.0632365371242573,0.295220295959204,0,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0.780534591431195,0,0.664394068946325,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0.178065603667255,0.162886959353576,5.93892442701128,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,1.58018378967908,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,2.64634077665954,0.16488625294148,0.161464426695906,0.241251699712623,0,0.164140899745061,2.33184669303881,0,0.170870880797853,0,0,0.188368457004691,0,0.228778173206523,0,0,0.138199973804424,2.86401185404534,0,0,0,0.836353184057875,1.74690050996942,2.83215127408124,3.88471241909079,4.97336289769656,1.42576470620972,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0.314578033277133,0,0,0,0,0,0.129920822977795,0,0,0.360586348559907,0,0,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,7.53439416725543,10.322536149815,4.57879060668163,2.78678892802786,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.419226325255965,0,0.222246727801615,0.206035057238894,0,0.505394423527595,0,0.188626341386076,0.468207537349412,0.192075457214608,0.459483751644906,0,0.231768651889711,0.38581844092741,0,0.588795680537589,0,0.177475806159338,0.238436189947321,0.290692833264657,0.564656282491984,0,0,0.526139422875686,0.407412341537585,0.561142271657738,0.711810108745045,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0.382576664137687,0,0 | |||
|short_description=p@chr11:3430049..3430068,- | |||
}} |
Latest revision as of 20:39, 5 August 2015
Short description: | p@chr11:3430049..3430068, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:3430049..3430068, - |
Coexpression cluster: | MCL_coexpression_mm9:1564 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.39e-17 | 47 |
cloaca | 2.33e-11 | 3 |
anal region | 2.33e-11 | 3 |
embryonic cloaca | 2.33e-11 | 3 |
terminal part of digestive tract | 2.33e-11 | 3 |
hindgut | 2.33e-11 | 3 |
primitive urogenital sinus | 2.33e-11 | 3 |
proctodeum | 2.33e-11 | 3 |
intestine | 1.18e-10 | 31 |
female reproductive system | 1.06e-09 | 9 |
subdivision of digestive tract | 6.43e-08 | 114 |
female organism | 7.06e-08 | 11 |
digestive system | 1.03e-07 | 116 |
digestive tract | 1.03e-07 | 116 |
primitive gut | 1.03e-07 | 116 |
endoderm-derived structure | 1.62e-07 | 118 |
endoderm | 1.62e-07 | 118 |
presumptive endoderm | 1.62e-07 | 118 |
male accessory sex gland | 2.45e-07 | 2 |
sex gland | 2.45e-07 | 2 |
male reproductive gland | 2.45e-07 | 2 |
stomach | 2.69e-07 | 16 |
food storage organ | 2.69e-07 | 16 |
female reproductive organ | 3.56e-07 | 8 |
internal female genitalia | 4.13e-07 | 5 |
orifice | 5.70e-07 | 5 |
genitourinary system | 5.70e-07 | 5 |