FFCP PHASE1:Hg19::chr9:36400257..36400272,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:36400257..36400272,-
|short_description=p8@RNF38
|description=CAGE_peak_8_at_RNF38_5end
|association_with_transcript=23bp_to_ENST00000353739,NM_022781,NM_1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=152006 | |EntrezGene=152006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18052 | |HGNC=18052 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0F5 | |UniProt=Q9H0F5 | ||
|association_with_transcript=23bp_to_ENST00000353739,NM_022781,NM_194329,uc003zzh.2,uc003zzi.2_5end | |||
|cluster_id=chr9:36400257..36400272,- | |||
|description=CAGE_peak_8_at_RNF38_5end | |||
|id=chr9:36400257..36400272,- | |||
|ontology_enrichment_celltype=CL:0000542!1.20e-07!53;CL:0000051!1.20e-07!53;CL:0000838!1.83e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.44e-10;3!CL:0000624;1.74e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.62e-10,3;CL:0000825,3.62e-10,3;CL:0000838,6.56e-09,52;CL:0000542,1.13e-08,53;CL:0000051,1.13e-08,53;CL:0000624,8.14e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.49e-11!235;DOID:14566!1.25e-10!239;DOID:305!1.48e-09!106;DOID:0050686!1.59e-07!137;DOID:0050687!8.42e-07!143;DOID:2531!8.75e-07!51;DOID:0060083!8.75e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0.491467873003018,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.410502947249729,0.550975469195755,1.18009283054671,1.53531759238885,0.464448369948228,0,0,0,1.08454080812422,1.70603078984906,2.64240395401362,1.10799081706375,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.598390972864896,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0.570025487482497,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,1.70763890732835,2.34894875748376,0.764546456250458,2.64342657158052,1.68152568894461,1.58030450865046,1.96709770113833,0.393010762749165,1.64481199199607,0.167186495390678,0.651844533267181,0.473447805734733,0,0.557052284425868,1.47302953737419,1.10766947291811,0.541607727530031,0,0.520237390239513,0.657751618414705,0.276350017785848,0,0.14828656316206,0,0,0.566546713487831,2.29932296161153,2.06176467289578,0.759059076058509,0,0,0,0.602300476311091,0.127986611154418,0,0,0,2.82249440514625,2.13952156626806,0.868946423296794,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.982343066232845,0,0.370784442784429,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.529636723252875,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0.113432183160021,0,0,0,0,0,0.515281080091258,0.37223371266318,0.337552664482532,0.0974370051611986,0.504867548488229,0.0920498986422993,0,0,0.10075209822764,0,0.57978255948989,0.818238361772504,0.286804595389004,0.609868530647977,0.662648841607426,0.348581828608555,0.829288440122964,0.504641701751257,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,1.22988438543114,0,0.98775256867763,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0.433099343283221,0.462985512576611,0.190254152234598,0,0,0,0,0,0.93733833986777,0.503946384596579,0.141775097242386,0.268675568108545,0.290633938513962,0,10.3459279958148,0.704387472105808,0,0.864719720501769,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,3.34952292343276,4.31255149719035,2.95188983443421,0,0,0.773288812777695,0,0,0.749007023947182,0,0,0,0,0,0,0,0.315404830067869,0.234282829985426,0,0,0,0,0.184369168541703,0,0,0,0.620304078368662,0.215714200818617,0.213455115606889,0,0,0.30239029332968,0.496215615637554,0.460385919864187,0,0.256278298511402,1.02341449813341,0.160853921143607,0,0,0,0,0,0,0.966875596732978,0.40101294060657,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0.539107359730903,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0.618246069886334,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0.384380134730212,1.40373983744043,0.708104465988849,0.464845549297286,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,1.47024129588619,0.371606350251437,0.432807638929335,0.284567373393656,0.318852545457645,0.399158742865633,0.383010740264733,0.211673582723883,0.973865820823666,2.24637742490767,0,0.313359791546046,2.50634477090067,0.50787533340481,0.802940375518498,0.201799707191048,0,0.343505344755765,0.614481528616916,0.447352215784832,0.500547425135725,0,0.556812347790485,0,0,2.99764771198038,1.4098700508785,0.18714054040822,0,0,0.334330152832435,0.284136146806413,0.71623345421307,0.890894042497916,0.921482106297696,0,0.281338832821026,0.111308705022906,0.16480387422676,0.211125408127993,0,1.10513566212459,0.755798243562828,0.306806047506464,0.615424027305347,0,0.269605053441981,0.537063524026827,1.53471711068062,0.394573622547734,0,1.11136990144637,0.969332746095218,0.185536196323703,0,0,1.83665999992011,0,0.341380344856499,0.508507300585533,0.472775363535873,0.689486746482929,0.291604613383254,0.173624994933292,0,0.361789315876224,0,0.110579259931225,0.591095237907095,0.438770794307945,0.762569244632931,2.09135616417905,0.153900517007594,0.113942055847001,0.922255617552241,0.538545866458633,0.434589487688032,3.19001159731919,0.366390373607449,2.66517388009317,0,0,0.664846727600626,0.451191321234361,0.392125068635479,0.503464760927528,0.75901493089674,0.317873157960757,0.210998064528027,0.163232808159148,1.41353071433941,0.216388639742091,0,0.530745387020035,1.22206028986725,0.593042257361244,0.123563938946503,0.313265848516366,0,0,0,0.182454789215666,0.391329237864179,0,0,0,0,0.189559738885464,0.901940516486955,0.103688191397247,0,0,0,0,0.284609546029793,0,0.173559738335131,0.293977192243133,0.78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| ||
|short_description=p8@RNF38 | |||
}} | }} |
Latest revision as of 09:42, 17 September 2015
Short description: | p8@RNF38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RNF38_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000353739, NM_022781, NM_194329, uc003zzh.2, uc003zzi.2_5end |
EntrezGene: | RNF38 |
HGNC: | 18052 |
UniProt: | Q9H0F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.62e-10 | 3 |
pro-NK cell | 3.62e-10 | 3 |
lymphoid lineage restricted progenitor cell | 6.56e-09 | 52 |
lymphocyte | 1.13e-08 | 53 |
common lymphoid progenitor | 1.13e-08 | 53 |
CD4-positive, alpha-beta T cell | 8.14e-08 | 6 |