FFCP PHASE1:Hg19::chr3:164169015..164169040,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:164169015..164169040,+ | |||
|description=CAGE_peak_at_chr3:164169015..164169040,+ | |||
|id=chr3:164169015..164169040,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.31e-13!75;CL:0002334!3.33e-09!12;CL:0000055!1.04e-08!180;CL:0002620!7.43e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002559;3.52e-11;5!CL:0002579;9.91e-09;3!CL:0002580;1.18e-08;3!CL:0002615;2.63e-08;3!CL:0000135;7.54e-08;3!CL:0000388;7.54e-08;3!CL:0000346;1.17e-07;3!CL:1000428;1.17e-07;3!CL:0002334;2.32e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,3.38e-11,5;CL:0000057,3.38e-10,76;CL:0000136,2.28e-09,15;CL:0002579,1.01e-08,3;CL:0002580,1.20e-08,3;CL:0002615,2.87e-08,3;CL:0000135,7.73e-08,3;CL:0000388,7.73e-08,3;CL:0000346,1.41e-07,3;CL:1000428,1.41e-07,3;CL:0002334,2.35e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0007123;6.08e-08;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-08!115;UBERON:0003688!5.00e-08!6;UBERON:0002358!5.00e-08!6;UBERON:0003684!5.00e-08!6;UBERON:0001178!5.00e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.39e-15;6!UBERON:0002358;2.39e-15;6!UBERON:0003684;2.39e-15;6!UBERON:0001178;2.39e-15;6!UBERON:0004457;6.74e-13;9!UBERON:0000042;6.74e-13;9!UBERON:0002073;3.52e-11;5!UBERON:0002097;4.10e-08;41!UBERON:0002046;6.08e-08;5!UBERON:0007846;7.54e-08;3!UBERON:0000043;7.54e-08;3!UBERON:0007845;7.54e-08;3!UBERON:0000412;1.17e-07;3!UBERON:0001992;1.17e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.65e-15,6;UBERON:0002358,2.65e-15,6;UBERON:0003684,2.65e-15,6;UBERON:0001178,2.65e-15,6;UBERON:0002073,3.38e-11,5;UBERON:0005086,3.38e-11,5;UBERON:0004457,2.55e-09,12;UBERON:0000042,2.55e-09,12;UBERON:0002097,1.18e-08,41;UBERON:0004797,7.08e-08,7;UBERON:0002046,7.24e-08,5;UBERON:0004117,7.24e-08,5;UBERON:0007689,7.24e-08,5;UBERON:0007123,7.24e-08,5;UBERON:0003091,7.24e-08,5;UBERON:0007846,7.73e-08,3;UBERON:0000043,7.73e-08,3;UBERON:0007845,7.73e-08,3;UBERON:0000412,1.41e-07,3;UBERON:0001992,1.41e-07,3;UBERON:0002199,2.43e-07,46;UBERON:0002416,2.43e-07,46 | |||
|phase1_expression=6.90377841228115,3.63970890614671,4.93340414335899,5.00366491765652,4.02264984984559,6.10636966870258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45457927542978,2.91250176828533,1.45650098894541,3.44203944898576,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0,0.326923806226917,0,0,0,0.312160076830321,0,0,0,0,0,0.408308342509787,0,0,1.18800285728205,0,0.910161361938026,0,0,0,0.831192346452549,0,0.612975591598039,0,0.453728732640084,1.4351170855109,0.85422955527427,6.35795703478686,0,0.412210116953756,2.83404594050192,2.60563598864226,1.35021065793013,1.46155507741798,2.27190396819703,4.97069452668416,0,0.710019185033229,0.705264687593482,0.67824236924195,0,0,0,0.121973706129595,0,0,0,0,0,6.25798129319264,3.21620469096443,1.38134921352481,2.78620756819187,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,3.80265104465493,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,1.06375246633948,0,0,0,0,0.285955987316295,0.542621605391443,0,0.325736184293735,0.710783897485092,0,0,0,0,0,0,0,2.63587341040741,3.44585807502342,0,3.76431397335706,0,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.788512075169673,3.74852527976682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1497138143952,11.2027240500286,4.77122160536225,8.20090555236486,11.7692667285342,6.27330292460069,0,0.616838775210622,0.355123450626254,0.164254312027618,0.519254429183621,0.464841513839837,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,1.6068392984416,0,0,0,0,0.322260734604821,0,0,0.178064071293475,0,0,0,0,0.464845549297286,1.88887408098384,0,0.616067160352178,2.12922412126809,0,1.8532421910392,1.71749864090389,0,2.84741482246853,0.953150969619124,0.255897791311334,0,0.636406495851874,0,0.359744915166629,0,0,0.404364963146632,0,0.421258456238981,0,0.731140468893853,1.05650146756755,0,0.282810863907425,0,2.2054613741845,0,0.438450885253763,0,0,0,0,0.281695602532241,0.430234056612155,0.294747123039363,0,0,1.26664581178598,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.779160935160341,0,0,0.996239941255349,0.276283915531148,0,0.102268682502155,0.123084805461069,2.48831670129446,0,0,0,0.591860433821602,0,15.5591786202492,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0.291604613383254,0,0.885741385813839,0,0,0.110579259931225,0,0.438770794307945,0,0,2.5393585306253,3.53220373125704,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,2.40109002588254,0,0,0,0,0,0,0,2.21879476821022,0.347119476670262,0,0,0.698906672968121,4.98759494167688,0,0.0730893170861856,0,0.581934098930517,0.0882561266915003,0.225980740780532,0.137041924646751,0.19871461170299,0,0,0.160317640503067,0.640358984218058,0,0,0,3.43189995723929,0,0.248505071130865,0,0.271808412147228,0,0,0,0,0.273810757783986,0,0,0,2.51354161145029,0.916641696046735,2.87149209830726,0,0,0.223171457441873,0.134366944973453,8.28689732147528,0,0,0,0,0.295282444544246,0,0,0.272406812223151,0,0,0,0,0,0,0,2.75819975547194,0.262272940674991,0,0,0,0,1.98627591109629,0,0.542999601753713,0,0,3.59190574687462,0,3.23737241392301,0,0,0,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0.221858103073705,0.124192805882767,6.36403720706662,0,0,0,0,0,0.144921028610825,0.149254802886874,1.16856654923612,0,0.189403005275089,0.50313580350515,0,0.915360273587694,0.453692771289717,0.466311601748341,0.887130899937803,0.318593534327405,0,0.465788870628778,0,1.32920857278997,0.521745061811734,0.150257608997218,0.761610424337591,0.406870733204662,0.909243296012797,0,0.928067519756987,0.398095888698616,0,5.15093557774189,2.35724642136143,0,0,16.2975609444944,0,0,1.389134845943,0.244736704506468,0,0,0,0,0.192914038270915,0,0,0.690860683462397,1.21543982470953,0.138258436151731,0,0,0,0.655219697692825,0,0,0,0,0.172214979660816,3.40509572140102,0,0,0,0,0,0,0,0.169732529954025,0,0,0,3.4980478571876,0,0,0,1.2249819094128,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.20336525358812,0,0,0,3.60298218522213,0,0.0675375846183947,0,0,0.126831620387814,0,0,0.992422356778588,0,0,0,0,3.03482802118316,5.46389259243114,0,0.115233987555779,4.45868824537288,0,0,0,0,1.17739639275771,0.157115589916002,0,0,2.15927591218621,0,2.07281978112303,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0.392616934229891,2.0793248022896,0,4.07825075250761,0,0,0.099941155924928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| |||
|short_description=p@chr3:164169015..164169040,+ | |||
}} |
Latest revision as of 17:53, 29 July 2015
Short description: | p@chr3:164169015..164169040, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:164169015..164169040, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 3.38e-11 | 5 |
fibroblast | 3.38e-10 | 76 |
fat cell | 2.28e-09 | 15 |
omentum preadipocyte | 1.01e-08 | 3 |
preadipocyte of the breast | 1.20e-08 | 3 |
adipocyte of omentum tissue | 2.87e-08 | 3 |
fibrocyte | 7.73e-08 | 3 |
tendon cell | 7.73e-08 | 3 |
hair follicle dermal papilla cell | 1.41e-07 | 3 |
stem cell of epidermis | 1.41e-07 | 3 |
preadipocyte | 2.35e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.65e-15 | 6 |
peritoneum | 2.65e-15 | 6 |
abdominal cavity | 2.65e-15 | 6 |
visceral peritoneum | 2.65e-15 | 6 |
hair follicle | 3.38e-11 | 5 |
hair follicle placode | 3.38e-11 | 5 |
cavity lining | 2.55e-09 | 12 |
serous membrane | 2.55e-09 | 12 |
skin of body | 1.18e-08 | 41 |
blood vessel layer | 7.08e-08 | 7 |
thyroid gland | 7.24e-08 | 5 |
pharyngeal pouch | 7.24e-08 | 5 |
thyroid diverticulum | 7.24e-08 | 5 |
pharyngeal pouch 2 | 7.24e-08 | 5 |
thyroid primordium | 7.24e-08 | 5 |
dense regular connective tissue | 7.73e-08 | 3 |
tendon | 7.73e-08 | 3 |
regular connective tissue | 7.73e-08 | 3 |
dermal papilla | 1.41e-07 | 3 |
papillary layer of dermis | 1.41e-07 | 3 |
integument | 2.43e-07 | 46 |
integumental system | 2.43e-07 | 46 |