FFCP PHASE1:Hg19::chr3:180588303..180588310,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339829 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25244 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-337bp_to_ENST00000485055,uc003fko.2_5end | |||
|cluster_id=chr3:180588303..180588310,- | |||
|coexpression_cluster_id=C77 | |||
|description=CAGE_peak_1_at_CCDC39_5end | |||
|id=chr3:180588303..180588310,- | |||
|ontology_enrichment_celltype=CL:0000136!1.73e-09!15;CL:0000188!3.50e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000680;7.84e-10;7!CL:0000515;4.02e-09;3!CL:0000136;1.05e-08;13!CL:0000188;3.04e-07;9!CL:0000056;6.41e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.01e-07,15;CL:0000188,3.15e-07,9;CL:0000515,8.32e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.78e-09;65!CL:0000515;6.41e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.99e-32!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.70e-15;16!UBERON:0002036;1.70e-15;16!UBERON:0002385;1.98e-08;31!UBERON:0001015;1.98e-08;31!UBERON:0000383;1.98e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.87e-19,114 | |||
|phase1_expression=2.90685406832891,1.49870366723688,0.845726424575827,1.0007329835313,0.446961094427288,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0,0,0,0.579386075843295,0,0,0,0,0.087834785693126,2.29213382120997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,2.86836620748814,0,0,0,0,4.97937656639626,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,1.45481451136931,0.355009592516614,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,2.02693829334611,4.10952645100767,3.40215830155802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,3.10419213877515,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,3.6830873589135,1.68396056659844,0.512556597022804,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,34.7963966309705,55.7764219463175,0,0,0,0.773365746336976,0.770243085573222,1.07452572308291,3.72158745708233,0.429680979473094,2.0302337147992,3.74997160630844,2.93805717634233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0.354761064070598,3.79993743535795,0,0,0,0,0,0,2.44773882019626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,6.44635988796334,0,0,0,0,0,0,0,0.281338832821026,0,0,0,3.38721580026819,1.10513566212459,0,0,0,0,0,0,0,2.07151151837561,0,0,0,0.185536196323703,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0.442317039724898,0,0.658156191461918,0,0,8.23367765990629,2.73460934032803,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0.953619473882272,0,0,0.141353071433941,0,0,2.0345239835768,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0.789168805698781,0,0.30607276163049,7.45601639616158,0,0,0,0,0,0,0.284609546029793,0,0,0,0,4.01871336956669,0,0,0,0,1.26085721434945,0,0.451961481561065,0,0,0.0633107959558787,0,0.64127056201227,1.28071796843612,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,4.74780082162832,1.3749625440701,0,0.798716001995964,1.71690419254628,0.223171457441873,0.53746777989381,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,3.57347663186684,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0.387848869084652,0,0,0,1.60181118851542,2.04365596629566,1.24271716604159,0.496166021811951,0,0,0,2.72008901684737,2.0055191521816,1.83807346058077,2.29510841496863,0,0.886068179966986,0,0,0,0.554645257684261,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0.50313580350515,0.889811221596536,0,2.11723293268535,0,0,0,0,0,0.414706207840855,0,0,0.450772826991655,0.380805212168795,0,0,0.214821114084977,0.464033759878494,0,0.400027764663154,0.686791410365586,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.132864840313363,0,1.63804924423206,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,1.52552838186867,0,0.795664888465099,4.96388167105098,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,0,5.45832296228224,1.58284119923659,0,0.535701835878287,0,1.21393120847326,1.13831095675649,0.177404740325278,0,0.342976018874837,0.339848664884159,0,0,0,2.04082041411336,0.157115589916002,0,0.913158720509496,0,0,4.00268647389276,0,0,0.173858272302579,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,5.82685953469105,9.03432700334974,0,0,0,0,0,0,0,0,0.385870790539723,0,0,4.4126697915703,0,0.196308467114945,0,1.2679671827502,0,3.66537280121429,3.02952073475813,0,0,0,0,0.730336388246517,0.917458566809082,0.286679166302903,0,0.203974470572744,0.436350690340377,0,0,2.77305377178851,1.73050624849516,0,0,0,0,0.26721740526556,0,1.0028301571695,2.72803313585662,2.41167717140561,0,0.20686599172379,4.26467963801962,0.714193294391221,0,0.434523000071005,1.45771421354797,0.12729431655633,0,1.74173398317569,0.342233301085281,0.134704106029175,1.72133292942423,0.332660356546013,0,0,0,0,0,4.76741632313179,0.813792356631477,1.33151354837103,1.61019034872821,0 | |||
|short_description=p1@CCDC39 | |||
}} |
Latest revision as of 21:38, 16 September 2015
Short description: | p1@CCDC39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC39_5end |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | -337bp_to_ENST00000485055, uc003fko.2_5end |
EntrezGene: | CCDC39 |
HGNC: | 25244 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.01e-07 | 15 |
cell of skeletal muscle | 3.15e-07 | 9 |
skeletal muscle myoblast | 8.32e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.87e-19 | 114 |