FFCP PHASE1:Mm9::chr13:32952878..32952890,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:32952878..32952890,+|id=chr13:32952878..32952890,+|ontology_enrichment_celltype=CL:0000473!3.93e-19!3;CL:0000627!3.93e-19!3;CL:0000682!3.93e-19!3;CL:0000239!2.99e-16!6;CL:0000677!2.99e-16!6;CL:0000212!2.99e-16!6;CL:0000584!2.99e-16!6;CL:0000075!5.71e-14!7;CL:0000066!2.55e-11!25;CL:0002563!6.42e-11!9;CL:0002251!6.42e-11!9|ontology_enrichment_celltype_v019_2=CL:0000682,3.62e-30,3;CL:0000239,3.50e-15,6;CL:0000677,3.50e-15,6;CL:0000584,3.50e-15,6;CL:0000066,4.44e-14,25;CL:0000473,2.31e-13,7;CL:0000075,4.10e-13,7;CL:0002563,2.40e-10,9;CL:0002251,2.40e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.40e-19!15;UBERON:0001962!5.55e-13!2;UBERON:0001961!5.55e-13!2;UBERON:0001744!5.55e-13!2;UBERON:0004923!1.02e-11!24;UBERON:0001242!1.52e-11!13;UBERON:0000060!1.52e-11!13;UBERON:0001262!1.52e-11!13;UBERON:0004786!1.52e-11!13;UBERON:0003350!6.42e-11!9;UBERON:0004808!6.42e-11!9;UBERON:0001277!6.42e-11!9;UBERON:0000485!5.70e-09!11;UBERON:0002465!5.92e-09!3;UBERON:0003199!3.20e-07!1;UBERON:0001723!5.53e-07!1;UBERON:0001033!5.53e-07!1;UBERON:0010056!5.53e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.51e-23,15;UBERON:0001962,3.91e-20,2;UBERON:0001961,3.91e-20,2;UBERON:0001744,3.91e-20,2;UBERON:0004923,1.61e-14,24;UBERON:0002465,8.96e-14,3;UBERON:0001242,2.30e-12,13;UBERON:0001262,2.30e-12,13;UBERON:0004786,2.30e-12,13;UBERON:0003199,8.99e-11,1;UBERON:0003350,2.40e-10,9;UBERON:0004808,2.40e-10,9;UBERON:0001277,2.40e-10,9;UBERON:0000485,1.41e-08,11|phase1_expression=0,4.53668029931169,1.81999695755814,0,0,0.839396359559449,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,2.2940928106717,2.29692785646008,3.4460959692726,5.817723282519,0,0,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr13:32952878..32952890,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:32952878..32952890,+ | |||
|description=CAGE_peak_at_chr13:32952878..32952890,+ | |||
|id=chr13:32952878..32952890,+ | |||
|ontology_enrichment_celltype=CL:0000473!3.93e-19!3;CL:0000627!3.93e-19!3;CL:0000682!3.93e-19!3;CL:0000239!2.99e-16!6;CL:0000677!2.99e-16!6;CL:0000212!2.99e-16!6;CL:0000584!2.99e-16!6;CL:0000075!5.71e-14!7;CL:0000066!2.55e-11!25;CL:0002563!6.42e-11!9;CL:0002251!6.42e-11!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.62e-30,3;CL:0000239,3.50e-15,6;CL:0000677,3.50e-15,6;CL:0000584,3.50e-15,6;CL:0000066,4.44e-14,25;CL:0000473,2.31e-13,7;CL:0000075,4.10e-13,7;CL:0002563,2.40e-10,9;CL:0002251,2.40e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.40e-19!15;UBERON:0001962!5.55e-13!2;UBERON:0001961!5.55e-13!2;UBERON:0001744!5.55e-13!2;UBERON:0004923!1.02e-11!24;UBERON:0001242!1.52e-11!13;UBERON:0000060!1.52e-11!13;UBERON:0001262!1.52e-11!13;UBERON:0004786!1.52e-11!13;UBERON:0003350!6.42e-11!9;UBERON:0004808!6.42e-11!9;UBERON:0001277!6.42e-11!9;UBERON:0000485!5.70e-09!11;UBERON:0002465!5.92e-09!3;UBERON:0003199!3.20e-07!1;UBERON:0001723!5.53e-07!1;UBERON:0001033!5.53e-07!1;UBERON:0010056!5.53e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.51e-23,15;UBERON:0001962,3.91e-20,2;UBERON:0001961,3.91e-20,2;UBERON:0001744,3.91e-20,2;UBERON:0004923,1.61e-14,24;UBERON:0002465,8.96e-14,3;UBERON:0001242,2.30e-12,13;UBERON:0001262,2.30e-12,13;UBERON:0004786,2.30e-12,13;UBERON:0003199,8.99e-11,1;UBERON:0003350,2.40e-10,9;UBERON:0004808,2.40e-10,9;UBERON:0001277,2.40e-10,9;UBERON:0000485,1.41e-08,11 | |||
|phase1_expression=0,4.53668029931169,1.81999695755814,0,0,0.839396359559449,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,2.2940928106717,2.29692785646008,3.4460959692726,5.817723282519,0,0,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr13:32952878..32952890,+ | |||
}} |
Latest revision as of 21:49, 5 August 2015
Short description: | p@chr13:32952878..32952890, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:32952878..32952890, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.62e-30 | 3 |
brush border epithelial cell | 3.50e-15 | 6 |
gut absorptive cell | 3.50e-15 | 6 |
enterocyte | 3.50e-15 | 6 |
epithelial cell | 4.44e-14 | 25 |
defensive cell | 2.31e-13 | 7 |
columnar/cuboidal epithelial cell | 4.10e-13 | 7 |
intestinal epithelial cell | 2.40e-10 | 9 |
epithelial cell of alimentary canal | 2.40e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.51e-23 | 15 |
gut-associated lymphoid tissue | 3.91e-20 | 2 |
mucosa-associated lymphoid tissue | 3.91e-20 | 2 |
lymphoid tissue | 3.91e-20 | 2 |
organ component layer | 1.61e-14 | 24 |
lymphoid system | 8.96e-14 | 3 |
intestinal mucosa | 2.30e-12 | 13 |
wall of intestine | 2.30e-12 | 13 |
gastrointestinal system mucosa | 2.30e-12 | 13 |
egg chamber | 8.99e-11 | 1 |
epithelium of mucosa | 2.40e-10 | 9 |
gastrointestinal system epithelium | 2.40e-10 | 9 |
intestinal epithelium | 2.40e-10 | 9 |
simple columnar epithelium | 1.41e-08 | 11 |