FFCP PHASE1:Mm9::chr13:89882289..89882300,-: Difference between revisions
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{{FFCP|EntrezGene=13003|HGNC=|MCL_coexpression_id=1123|UniProt=E9QQ15,E9PYH0,E9QMK2,E9QMK3,G3XA35,Q8BS97,Q62059|association_with_transcript=-172bp_to_ENSMUST00000022114,NM_001081249,NM_001134474,NM_001134475,NM_019389,NM_172955,uc007rjg.1,uc007rjh.1,uc007rji.2,uc007rjk.2,uc011zck.1_5end|description=CAGE_peak_7_at_Vcan_5end|id=chr13:89882289..89882300,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!1.70e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0002102,1.59e-07,7;UBERON:0004710,1.59e-07,7;UBERON:0005419,1.59e-07,7;UBERON:0005417,1.59e-07,7;UBERON:0005729,1.59e-07,7|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,1.5626706890476,0.523523743973798,0,0,0,0.629484089877886,0.202753862439029,1.10128051297009,0,0,0,0,0.279972843250725,0,0,0,0,1.54355661621568,1.14613375975503,0.515672092277442,0.606949382578793,2.11596391708813,0.633831403506179,1.0165335962074,0,0,0,0,0.299600110518405,0.384218305321555,1.76272340924412,2.56511282830212,2.10324961351382,1.71390590642282,0.662605622854841,2.08234358665422,2.30029130443767,0,0,0.255374676170375,0.153606533256243,0.791317726381163,0.640413505216868,3.12548022334056,0,0,0.30559649555362,2.06240009831567,0.854230084794618,0.372798891650601,0.605809546665472,0.831287161174641,0.289864488701678,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0.70667914902068,0.281686839553361,2.56652954828636,0,0,0,0,0,0.11418387971906,0,0,0.693941307064543,0.913396434936424,0.230615497256059,0.452167921657868,1.29347577849275,0,0.494389935468748,0.722996784599558,0,2.91180329905337,0.441683036920787,0.969750506270444,0,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,0.149790639404823,0.457500602818626,4.02093926761166,0.173824320192276,0,0.20778804455956,0.162241263067758,5.70300437561771,0.622034853050465,0.252722758433675,0.210441855886474,2.60240885925407,0.919608417733892,1.62055916824814,1.35634336052144,1.56483948048054,1.0249097622788,1.03071897015702,0.776110112217047,6.68260778091811,8.88798576788751,8.2697028357056,3.94552318369635,4.44875598760957,2.78601733217733,4.7329891373827,2.58744546864041,0,0,0,4.76389276831654,3.51789089971644,1.80062061461015,3.78791576936336,3.54175617145327,2.1597395804233,2.55787339225449,0.804820204198858,1.98501082024188,1.15191894939436,0.656669856316381,0.486412857275134,0.584799949701329,0.439100230582101,0.536825675041487,0.841159794256509,2.26390147234426,0,0,1.70630600428187,3.0190767341857,1.28867461322093,2.01683524623343,0.667134131534611,0.570676878337677,0,0.494096864172033,0.251335208800269,0.596869416123452,0.779856348476481,0,1.29682829924817,0,0.758671603812327,2.62771579002376,1.1270773567308,1.62921062276251,1.55161989734101,2.10407459670956,0.252946148497029,0.147610147979602,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,0,0.744281895337007,0,0,0,0,0.184753190166605,1.70542270593436,4.07412441105065,3.39490171550376,2.58159273117352,1.84256883185997,0.476087281772027,0.390267295715598,2.52216230569906,1.10732344824387,0.956728611944923,0,0.690739927463582,0.144649058581512,0,0,0.491764273019036,0,1.12385412991454,0.586058432961016,0.655739781506702,0.504941854408746,0.315508219416257,0.390438744296638,0.430846795465598,0,0,0,1.21443210502468,0,0,0.321321316421807,1.13552068166615,3.20518086601059,4.23506094319298,0.329940245945071,0,0.242780636154981,0.302323556964751,1.13163047853539,0.590603785761546,1.53717573971964,1.80899805217755,1.81766864738753,1.42598951353889,0.632073515871632,0,0,0,1.8006109403131,1.03486947026204,1.07168517515796,2.30542303734956,1.42695054081656,1.15184314421485,1.522324745573,0.23467170806371,0,0.661585194164886,0,1.93757312035087,2.89502039655148,2.74556391207214,1.64140899745061,0,0,0,1.23832120777933,1.85194527369712,0,0,0.228778173206523,0,0,0,0,2.68885594543965,2.23651413839534,1.40406943068342,0.627264888043406,0.655087691238533,2.15782954215713,1.23980183588004,0.785267825952089,0.388844919875379,0.621339313086926,0,1.49516546043979,1.15820943319968,1.36115831840833,1.03327858782185,1.35164900392623,1.17357238645754,0.911430693907651,0.104859344425711,0,0.576060012515731,0,1.41907650703115,1.43795340030758,0.25984164595559,0.895133478337407,0.198681354781265,0,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0,0,0.453460767230423,0.221985953374065,0.358855426437903,0.167884616364078,1.73870634628971,0.563047426353546,0.73260649706906,0.214368379079066,0,0.564751842617067,0,0,0.68741272937475,0,1.5107877947794,0,0,0,0,2.07574695168353,2.79317411380722,2.90247129782028,3.64660075602441,1.25767897576789,1.47074806760011,2.22246727801615,3.29656091582231,3.85103051510178,3.53776096469316,3.54871019846336,2.82939512079114,2.24739617927718,2.68905640100451,3.27382173046996,1.90517476513229,1.97003354106254,1.73618298417335,5.35711671044299,2.94397840268795,2.74295401908332,2.8396128985494,1.43061713968393,2.61623549938191,3.10560955370591,2.28459441307527,2.74391959309159,2.63069711437843,3.12349461845482,1.68342681497322,2.13543032623513,2.85662998889134,1.22769312950907,2.32405261778949,1.92906610981141,2.49810577937946,2.10538447600868,2.79332370262788,2.67803664896381,1.54413993383661,1.39120701372253|short_description=p7@Vcan}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13003 | |||
|HGNC= | |||
|MCL_coexpression_id=1123 | |||
|TSSclassifier=NA | |||
|UniProt=E9QQ15,E9PYH0,E9QMK2,E9QMK3,G3XA35,Q8BS97,Q62059 | |||
|association_with_transcript=-172bp_to_ENSMUST00000022114,NM_001081249,NM_001134474,NM_001134475,NM_019389,NM_172955,uc007rjg.1,uc007rjh.1,uc007rji.2,uc007rjk.2,uc011zck.1_5end | |||
|cluster_id=chr13:89882289..89882300,- | |||
|description=CAGE_peak_7_at_Vcan_5end | |||
|id=chr13:89882289..89882300,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.70e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,1.59e-07,7;UBERON:0004710,1.59e-07,7;UBERON:0005419,1.59e-07,7;UBERON:0005417,1.59e-07,7;UBERON:0005729,1.59e-07,7 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,1.5626706890476,0.523523743973798,0,0,0,0.629484089877886,0.202753862439029,1.10128051297009,0,0,0,0,0.279972843250725,0,0,0,0,1.54355661621568,1.14613375975503,0.515672092277442,0.606949382578793,2.11596391708813,0.633831403506179,1.0165335962074,0,0,0,0,0.299600110518405,0.384218305321555,1.76272340924412,2.56511282830212,2.10324961351382,1.71390590642282,0.662605622854841,2.08234358665422,2.30029130443767,0,0,0.255374676170375,0.153606533256243,0.791317726381163,0.640413505216868,3.12548022334056,0,0,0.30559649555362,2.06240009831567,0.854230084794618,0.372798891650601,0.605809546665472,0.831287161174641,0.289864488701678,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0.70667914902068,0.281686839553361,2.56652954828636,0,0,0,0,0,0.11418387971906,0,0,0.693941307064543,0.913396434936424,0.230615497256059,0.452167921657868,1.29347577849275,0,0.494389935468748,0.722996784599558,0,2.91180329905337,0.441683036920787,0.969750506270444,0,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,0.149790639404823,0.457500602818626,4.02093926761166,0.173824320192276,0,0.20778804455956,0.162241263067758,5.70300437561771,0.622034853050465,0.252722758433675,0.210441855886474,2.60240885925407,0.919608417733892,1.62055916824814,1.35634336052144,1.56483948048054,1.0249097622788,1.03071897015702,0.776110112217047,6.68260778091811,8.88798576788751,8.2697028357056,3.94552318369635,4.44875598760957,2.78601733217733,4.7329891373827,2.58744546864041,0,0,0,4.76389276831654,3.51789089971644,1.80062061461015,3.78791576936336,3.54175617145327,2.1597395804233,2.55787339225449,0.804820204198858,1.98501082024188,1.15191894939436,0.656669856316381,0.486412857275134,0.584799949701329,0.439100230582101,0.536825675041487,0.841159794256509,2.26390147234426,0,0,1.70630600428187,3.0190767341857,1.28867461322093,2.01683524623343,0.667134131534611,0.570676878337677,0,0.494096864172033,0.251335208800269,0.596869416123452,0.779856348476481,0,1.29682829924817,0,0.758671603812327,2.62771579002376,1.1270773567308,1.62921062276251,1.55161989734101,2.10407459670956,0.252946148497029,0.147610147979602,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,0,0.744281895337007,0,0,0,0,0.184753190166605,1.70542270593436,4.07412441105065,3.39490171550376,2.58159273117352,1.84256883185997,0.476087281772027,0.390267295715598,2.52216230569906,1.10732344824387,0.956728611944923,0,0.690739927463582,0.144649058581512,0,0,0.491764273019036,0,1.12385412991454,0.586058432961016,0.655739781506702,0.504941854408746,0.315508219416257,0.390438744296638,0.430846795465598,0,0,0,1.21443210502468,0,0,0.321321316421807,1.13552068166615,3.20518086601059,4.23506094319298,0.329940245945071,0,0.242780636154981,0.302323556964751,1.13163047853539,0.590603785761546,1.53717573971964,1.80899805217755,1.81766864738753,1.42598951353889,0.632073515871632,0,0,0,1.8006109403131,1.03486947026204,1.07168517515796,2.30542303734956,1.42695054081656,1.15184314421485,1.522324745573,0.23467170806371,0,0.661585194164886,0,1.93757312035087,2.89502039655148,2.74556391207214,1.64140899745061,0,0,0,1.23832120777933,1.85194527369712,0,0,0.228778173206523,0,0,0,0,2.68885594543965,2.23651413839534,1.40406943068342,0.627264888043406,0.655087691238533,2.15782954215713,1.23980183588004,0.785267825952089,0.388844919875379,0.621339313086926,0,1.49516546043979,1.15820943319968,1.36115831840833,1.03327858782185,1.35164900392623,1.17357238645754,0.911430693907651,0.104859344425711,0,0.576060012515731,0,1.41907650703115,1.43795340030758,0.25984164595559,0.895133478337407,0.198681354781265,0,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0,0,0.453460767230423,0.221985953374065,0.358855426437903,0.167884616364078,1.73870634628971,0.563047426353546,0.73260649706906,0.214368379079066,0,0.564751842617067,0,0,0.68741272937475,0,1.5107877947794,0,0,0,0,2.07574695168353,2.79317411380722,2.90247129782028,3.64660075602441,1.25767897576789,1.47074806760011,2.22246727801615,3.29656091582231,3.85103051510178,3.53776096469316,3.54871019846336,2.82939512079114,2.24739617927718,2.68905640100451,3.27382173046996,1.90517476513229,1.97003354106254,1.73618298417335,5.35711671044299,2.94397840268795,2.74295401908332,2.8396128985494,1.43061713968393,2.61623549938191,3.10560955370591,2.28459441307527,2.74391959309159,2.63069711437843,3.12349461845482,1.68342681497322,2.13543032623513,2.85662998889134,1.22769312950907,2.32405261778949,1.92906610981141,2.49810577937946,2.10538447600868,2.79332370262788,2.67803664896381,1.54413993383661,1.39120701372253 | |||
|short_description=p7@Vcan | |||
}} |
Latest revision as of 00:00, 2 October 2015
Short description: | p7@Vcan |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Vcan_5end |
Coexpression cluster: | MCL_coexpression_mm9:1123 |
Association with transcript: | -172bp_to_ENSMUST00000022114, NM_001081249, NM_001134474, NM_001134475, NM_019389, NM_172955, uc007rjg.1, uc007rjh.1, uc007rji.2, uc007rjk.2, uc011zck.1_5end |
EntrezGene: | Vcan |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
forelimb | 1.59e-07 | 7 |
pectoral appendage | 1.59e-07 | 7 |
pectoral appendage bud | 1.59e-07 | 7 |
forelimb bud | 1.59e-07 | 7 |
forelimb/pectoral fin field | 1.59e-07 | 7 |