FFCP PHASE1:Hg19::chr4:106816581..106816582,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255743 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27405 | |||
|TSSclassifier=strong | |||
|UniProt=Q6UXI9 | |||
|association_with_transcript=-11bp_to_ENST00000379987_5end | |||
|cluster_id=chr4:106816581..106816582,+ | |||
|description=CAGE_peak_6_at_NPNT_5end | |||
|id=chr4:106816581..106816582,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.61e-23;5!UBERON:0006965;1.91e-15;2 | |||
|ontology_enrichment_disease=DOID:305!7.28e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.05e-29;1!DOID:3149;2.05e-29;1!DOID:3451;1.91e-15;2!DOID:4159;1.91e-15;2!DOID:0060122;1.91e-15;2!DOID:4362;5.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.20e-29,1;DOID:3149,4.20e-29,1;DOID:3451,2.74e-15,2;DOID:4159,2.74e-15,2;DOID:0060122,2.74e-15,2;DOID:4362,6.04e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.70e-13!9;UBERON:0000481!1.04e-11!347;UBERON:0001007!1.26e-11!155;UBERON:0001555!1.26e-11!155;UBERON:0007026!1.26e-11!155;UBERON:0001557!1.74e-11!19;UBERON:0007023!3.75e-11!115;UBERON:0004921!6.21e-11!129;UBERON:0004185!6.21e-11!129;UBERON:0004119!1.03e-09!169;UBERON:0000925!1.03e-09!169;UBERON:0006595!1.03e-09!169;UBERON:0008947!1.16e-07!38;UBERON:0003258!1.16e-07!38;UBERON:0000062!1.30e-07!511;UBERON:0000065!1.36e-07!53;UBERON:0000077!4.31e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.61e-23;5!UBERON:0000014;2.18e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.61e-23,5;UBERON:0004117,1.61e-23,5;UBERON:0007689,1.61e-23,5;UBERON:0007123,1.61e-23,5;UBERON:0003091,1.61e-23,5;UBERON:0009722,2.83e-11,11;UBERON:0007690,2.83e-11,11;UBERON:0000014,2.61e-08,4;UBERON:0008814,2.95e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0.241011029883482,0.55146986366197,0.871517776369625,0.474541238222193,0,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59398390600856,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.524759999977174,0,0.227586896570999,0,0,0.344743373241465,0.583209226766509,0.347249989866585,0,0.241192877250816,0,0,0,0,0,1.11538995422883,0.307801034015188,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,0,0.282706142867882,0,0,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0.61214552326098,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0.864542502924636,0,0.171594997861965,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0.164831716762333,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,1.0063040627978,0.315222829196793,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.640724475406168,1.25763444079733,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.504143392443436,0,0.322951291263702,0,0,0,0.366857197043358,0,0,0,0.994581110581374,0.150420656698515,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0.496211178389294,0,0.511049710558381,0,0,0.606965604236632,0.227662191351298,0,0.115233987555779,0,0,0,0,0.111231401892069,0.235479278551542,0.314231179832004,0.280272163313789,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0.11294608203896,0,0.150962843566674,0.463044948647668,0.437119121007915,0,0,0,0,0,0.8453114551668,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0.20686599172379,0.213233981900981,0.952257725854961,0.0645889098360061,0.0620747142958579,0.224263725161227,1.0820016907288,1.41482032270754,0,0.342233301085281,0.134704106029175,0.0717222053926763,0,0,0,0,0.628776414746108,0,0.122241444182866,0,0,0,0 | |||
|short_description=p6@NPNT | |||
}} |
Latest revision as of 06:48, 20 September 2015
Short description: | p6@NPNT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NPNT_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000379987_5end |
EntrezGene: | NPNT |
HGNC: | 27405 |
UniProt: | Q6UXI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.61e-23 | 5 |
pharyngeal pouch | 1.61e-23 | 5 |
thyroid diverticulum | 1.61e-23 | 5 |
pharyngeal pouch 2 | 1.61e-23 | 5 |
thyroid primordium | 1.61e-23 | 5 |
entire pharyngeal arch endoderm | 2.83e-11 | 11 |
early pharyngeal endoderm | 2.83e-11 | 11 |
zone of skin | 2.61e-08 | 4 |
pharyngeal arch system | 2.95e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.20e-29 | 1 |
keratoacanthoma | 4.20e-29 | 1 |
skin carcinoma | 2.74e-15 | 2 |
skin cancer | 2.74e-15 | 2 |
integumentary system cancer | 2.74e-15 | 2 |
cervical cancer | 6.04e-07 | 5 |