FFCP PHASE1:Mm9::chr16:21855218..21855239,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:21855218..21855239,+|id=chr16:21855218..21855239,+|ontology_enrichment_celltype=CL:0002563!1.09e-10!9;CL:0002251!1.09e-10!9;CL:0000239!2.60e-08!6;CL:0000677!2.60e-08!6;CL:0000212!2.60e-08!6;CL:0000584!2.60e-08!6;CL:0000075!5.58e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,6.40e-08,6;CL:0000677,6.40e-08,6;CL:0000584,6.40e-08,6;CL:0000075,8.75e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.46e-19!43;UBERON:0005409!4.35e-15!59;UBERON:0000344!4.59e-13!15;UBERON:0001242!8.75e-11!13;UBERON:0000060!8.75e-11!13;UBERON:0001262!8.75e-11!13;UBERON:0004786!8.75e-11!13;UBERON:0003350!1.09e-10!9;UBERON:0004808!1.09e-10!9;UBERON:0001277!1.09e-10!9;UBERON:0000485!2.21e-08!11;UBERON:0004923!6.29e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.54e-33,31;UBERON:0005409,3.58e-25,47;UBERON:0000344,1.09e-10,15;UBERON:0001007,3.83e-10,116;UBERON:0001555,3.83e-10,116;UBERON:0007026,3.83e-10,116;UBERON:0004119,7.02e-10,118;UBERON:0000925,7.02e-10,118;UBERON:0006595,7.02e-10,118;UBERON:0004921,2.03e-08,114;UBERON:0001242,2.31e-07,13;UBERON:0001262,2.31e-07,13;UBERON:0004786,2.31e-07,13|phase1_expression=0,5.58360652222978,2.72999543633722,16.9379958331825,17.0304548181758,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.14704640533585,2.29692785646008,0.86152399231815,0.861884930743556,0,1.00812051903972,0,0,0,0,0.577703239502549,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0,0,7.40825460104915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.9369544857965,16.9248362664668,0,0,0.644337306610467,5.04208811558356,8.45036566610507,11.4135375667535,15.1849299694244,23.7166494802576,16.8394589896181,16.7123436514567,21.2510854959841,21.5716658077013,11.2391785934841,8.96135729644652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4382712447475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.45294426226567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,1.25452977608681,2.40198820120795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0.551530525350042,0.666740183404846,0,0,0.758091635291392,0.25347929989024,0.377252682772152,0.749132059759059,0.89635213366817,0.861532034334199,0.476293691283074,0.811190281613988,0.578727661391115,0.412085900803307,0.735994600671987,1.02860775715625,1.06485483695602,0.953744759789284,0.726732083161643,0.658765662907314,0.423073039458382,0.914639864363863,0.789209134313529,1.08643291076689,1.68342681497322,0.593175090620871,0.591026894253381,0,0.309873682371932,0.964533054905707,0,1.87145286756327,1.07435527024149,0,0,0|short_description=p@chr16:21855218..21855239,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:21855218..21855239,+ | |||
|description=CAGE_peak_at_chr16:21855218..21855239,+ | |||
|id=chr16:21855218..21855239,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.09e-10!9;CL:0002251!1.09e-10!9;CL:0000239!2.60e-08!6;CL:0000677!2.60e-08!6;CL:0000212!2.60e-08!6;CL:0000584!2.60e-08!6;CL:0000075!5.58e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.40e-08,6;CL:0000677,6.40e-08,6;CL:0000584,6.40e-08,6;CL:0000075,8.75e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.46e-19!43;UBERON:0005409!4.35e-15!59;UBERON:0000344!4.59e-13!15;UBERON:0001242!8.75e-11!13;UBERON:0000060!8.75e-11!13;UBERON:0001262!8.75e-11!13;UBERON:0004786!8.75e-11!13;UBERON:0003350!1.09e-10!9;UBERON:0004808!1.09e-10!9;UBERON:0001277!1.09e-10!9;UBERON:0000485!2.21e-08!11;UBERON:0004923!6.29e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.54e-33,31;UBERON:0005409,3.58e-25,47;UBERON:0000344,1.09e-10,15;UBERON:0001007,3.83e-10,116;UBERON:0001555,3.83e-10,116;UBERON:0007026,3.83e-10,116;UBERON:0004119,7.02e-10,118;UBERON:0000925,7.02e-10,118;UBERON:0006595,7.02e-10,118;UBERON:0004921,2.03e-08,114;UBERON:0001242,2.31e-07,13;UBERON:0001262,2.31e-07,13;UBERON:0004786,2.31e-07,13 | |||
|phase1_expression=0,5.58360652222978,2.72999543633722,16.9379958331825,17.0304548181758,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.14704640533585,2.29692785646008,0.86152399231815,0.861884930743556,0,1.00812051903972,0,0,0,0,0.577703239502549,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0,0,7.40825460104915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.9369544857965,16.9248362664668,0,0,0.644337306610467,5.04208811558356,8.45036566610507,11.4135375667535,15.1849299694244,23.7166494802576,16.8394589896181,16.7123436514567,21.2510854959841,21.5716658077013,11.2391785934841,8.96135729644652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4382712447475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.45294426226567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,1.25452977608681,2.40198820120795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0.551530525350042,0.666740183404846,0,0,0.758091635291392,0.25347929989024,0.377252682772152,0.749132059759059,0.89635213366817,0.861532034334199,0.476293691283074,0.811190281613988,0.578727661391115,0.412085900803307,0.735994600671987,1.02860775715625,1.06485483695602,0.953744759789284,0.726732083161643,0.658765662907314,0.423073039458382,0.914639864363863,0.789209134313529,1.08643291076689,1.68342681497322,0.593175090620871,0.591026894253381,0,0.309873682371932,0.964533054905707,0,1.87145286756327,1.07435527024149,0,0,0 | |||
|short_description=p@chr16:21855218..21855239,+ | |||
}} |
Latest revision as of 04:31, 6 August 2015
Short description: | p@chr16:21855218..21855239, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:21855218..21855239, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.40e-08 | 6 |
gut absorptive cell | 6.40e-08 | 6 |
enterocyte | 6.40e-08 | 6 |
columnar/cuboidal epithelial cell | 8.75e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.54e-33 | 31 |
gastrointestinal system | 3.58e-25 | 47 |
mucosa | 1.09e-10 | 15 |
digestive system | 3.83e-10 | 116 |
digestive tract | 3.83e-10 | 116 |
primitive gut | 3.83e-10 | 116 |
endoderm-derived structure | 7.02e-10 | 118 |
endoderm | 7.02e-10 | 118 |
presumptive endoderm | 7.02e-10 | 118 |
subdivision of digestive tract | 2.03e-08 | 114 |
intestinal mucosa | 2.31e-07 | 13 |
wall of intestine | 2.31e-07 | 13 |
gastrointestinal system mucosa | 2.31e-07 | 13 |