FFCP PHASE1:Hg19::chr4:909539..909550,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2580 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4113 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000510022_5end | |||
|cluster_id=chr4:909539..909550,- | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_7_at_GAK_5end | |||
|id=chr4:909539..909550,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.62e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.62e-23,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;3.61e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.61e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.55e-25!115;UBERON:0001049!3.90e-24!57;UBERON:0005068!3.90e-24!57;UBERON:0006241!3.90e-24!57;UBERON:0007135!3.90e-24!57;UBERON:0002616!1.06e-20!59;UBERON:0001893!4.77e-18!34;UBERON:0002780!5.03e-17!41;UBERON:0001890!5.03e-17!41;UBERON:0006240!5.03e-17!41;UBERON:0000955!9.34e-17!69;UBERON:0006238!9.34e-17!69;UBERON:0003080!1.50e-16!42;UBERON:0002791!6.40e-16!33;UBERON:0002020!2.25e-15!34;UBERON:0003528!2.25e-15!34;UBERON:0002346!3.77e-15!90;UBERON:0001017!4.12e-15!82;UBERON:0003075!2.02e-14!86;UBERON:0007284!2.02e-14!86;UBERON:0005743!3.35e-14!86;UBERON:0001869!5.37e-14!32;UBERON:0001950!4.61e-13!20;UBERON:0000073!1.97e-12!94;UBERON:0001016!1.97e-12!94;UBERON:0002298!8.09e-12!8;UBERON:0002619!8.61e-12!22;UBERON:0003056!1.83e-10!61;UBERON:0000200!2.24e-10!6;UBERON:0000956!2.98e-10!25;UBERON:0000203!2.98e-10!25;UBERON:0000033!9.72e-10!123;UBERON:0000153!4.55e-09!129;UBERON:0007811!4.55e-09!129;UBERON:0003076!6.56e-09!15;UBERON:0003057!6.56e-09!15;UBERON:0003127!6.69e-09!2;UBERON:0004733!6.36e-08!12;UBERON:0002028!6.36e-08!12;UBERON:0007277!6.36e-08!12;UBERON:0001871!1.13e-07!7;UBERON:0000025!2.18e-07!194;UBERON:0004732!2.73e-07!13;UBERON:0000924!4.58e-07!173;UBERON:0006601!4.58e-07!173;UBERON:0002420!7.15e-07!9;UBERON:0007245!7.15e-07!9;UBERON:0010009!7.15e-07!9;UBERON:0010011!7.15e-07!9;UBERON:0000454!7.15e-07!9;UBERON:0002308!7.63e-07!9;UBERON:0000125!7.63e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;4.66e-66;1!UBERON:0006518;4.66e-66;1!UBERON:0008949;4.66e-66;1!UBERON:0000101;4.66e-66;1!UBERON:0002167;4.66e-66;1!UBERON:0001041;5.89e-20;14!UBERON:0000945;1.40e-14;5!UBERON:0010039;1.40e-14;5!UBERON:0001044;2.45e-12;6!UBERON:0003293;2.45e-12;6!UBERON:0003294;2.45e-12;6!UBERON:0010047;2.45e-12;6!UBERON:0003408;2.45e-12;6!UBERON:0000167;2.45e-12;6!UBERON:0004921;1.20e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,4.66e-66,1;UBERON:0006518,4.66e-66,1;UBERON:0008949,4.66e-66,1;UBERON:0000101,4.66e-66,1;UBERON:0002167,4.66e-66,1;UBERON:0001044,2.45e-12,6;UBERON:0003293,2.45e-12,6;UBERON:0003294,2.45e-12,6;UBERON:0010047,2.45e-12,6;UBERON:0000167,2.45e-12,6;UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8;UBERON:0003408,6.13e-08,10;UBERON:0001041,7.10e-08,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0.614481528616916,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.182248669974074,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0.314408610199332,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73250094702305,0,0,0,0,0,0,0,8.53907032452614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p7@GAK | |||
}} |
Latest revision as of 09:09, 19 September 2015
Short description: | p7@GAK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GAK_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000510022_5end |
EntrezGene: | GAK |
HGNC: | 4113 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.62e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 4.66e-66 | 1 |
right lung lobe | 4.66e-66 | 1 |
lower lobe of lung | 4.66e-66 | 1 |
lobe of lung | 4.66e-66 | 1 |
right lung | 4.66e-66 | 1 |
saliva-secreting gland | 2.45e-12 | 6 |
gland of oral region | 2.45e-12 | 6 |
gland of foregut | 2.45e-12 | 6 |
oral gland | 2.45e-12 | 6 |
oral cavity | 2.45e-12 | 6 |
stomach | 1.24e-09 | 8 |
food storage organ | 1.24e-09 | 8 |
gland of gut | 6.13e-08 | 10 |
foregut | 7.10e-08 | 87 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.61e-34 | 2 |