FFCP PHASE1:Hg19::chr5:176874975..176874999,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340037 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-30bp_to_NR_038915,NR_038916,uc003mgt.2_5end | |||
|cluster_id=chr5:176874975..176874999,- | |||
|description=CAGE_peak_1_at_LOC340037_5end | |||
|id=chr5:176874975..176874999,- | |||
|ontology_enrichment_celltype=CL:0000066!1.84e-21!254;CL:0002321!1.39e-09!248;CL:0000220!3.80e-09!246 | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.50e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.01e-17!106;DOID:0050687!3.65e-16!143;DOID:14566!4.12e-15!239;DOID:162!1.63e-14!235 | |||
|ontology_enrichment_disease_v019=DOID:4362;6.88e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.34e-07,235;DOID:14566,4.67e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0008947!6.56e-09!38;UBERON:0003258!6.56e-09!38;UBERON:0001737!6.63e-09!9;UBERON:0001041!1.45e-07!98;UBERON:0003104!1.46e-07!238;UBERON:0009142!1.46e-07!238;UBERON:0004119!1.89e-07!169;UBERON:0000925!1.89e-07!169;UBERON:0006595!1.89e-07!169;UBERON:0001007!3.19e-07!155;UBERON:0001555!3.19e-07!155;UBERON:0007026!3.19e-07!155;UBERON:0000077!5.33e-07!130;UBERON:0000072!7.26e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.15e-18;9!UBERON:0001557;9.15e-18;9!UBERON:0006955;1.04e-07;2!UBERON:0004801;1.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.83e-18,9;UBERON:0001557,6.03e-08,19;UBERON:0006955,3.50e-07,2;UBERON:0004801,3.50e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.247532705920093,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0.572471974262113,0.547497700291537,0.125542639594803,0.687720651731561,0.57470412614962,0.393553906568396,0,0,0.154816123316076,0,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27867425159808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0,0,0,0.189069634328136,0,0.175669571386252,0,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0.838998872419812,0,0.417989933073621,0,0,0,0,0.760272105718513,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0.937285727335186,0,0,0.298897361103602,0.939475989150119,0.485618833104395,1.82586048712923,0.61246251376468,0.982674538494144,0.309977343527296,0,0,0.910161361938026,0,2.18836948140286,1.00094815897571,1.10825646193673,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0.640672166455702,0,0.600182192168805,0,0.257640540045629,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0.169560592310488,0,1.63647672354501,0.286804595389004,0.365921118388786,0.265059536642971,0.116193942869518,0.518305275076852,0,0,0,0,0,0,0,1.77460200059766,0.842923450390509,0.964044119533928,1.10293972732394,1.08939722046203,2.37270619111097,1.21348177344148,1.56977172100277,1.53898862778556,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.219500570817251,1.1240175325762,0,0.185176890317059,0,1.03993478527958,0,0.34779121492523,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0.283550194484773,0.53735113621709,0.581267877027924,1.15014803749563,0,0,0,0,0,0,0.381988425558278,0,0,0.411309970813294,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.40101294060657,0.276242966807689,0.229628896329213,0,0,0,0.231046011313244,0.784349769176855,2.92278449306521,0.316654886678627,0,0,1.0795795805107,0,0.541892875087706,0,1.01950509218015,0,0.895499018888713,0,0,0,0.328014645699706,0,0,1.37354197227515,2.7228134973794,0,0,0,0,0,0,0.275673144969061,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.192190067365106,1.40373983744043,0,0,0.62962469366128,0,0,0.532306030317022,0,0,0.429374660225974,0,0,0,0,0,0,0.78494864019923,0,0,0,0.404364963146632,0,0,0.48763373908959,0,1.05650146756755,0,0.141405431953713,0,0,0.66343897524122,0.438450885253763,1.15755106853338,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0,0,0.211107635297664,0,0,0.349934720244983,0.769776901804097,0.670302275535787,0,0,1.29151611801369,0,0,0.229723400206959,0.507447609232169,3.82318603571188,0.569647187174163,0.238231775457789,0,0.648473311192717,0.540031437238115,1.58625035258854,0.213648142254946,0,0,0,0,0,0,0.59873811429845,0,0.635020748171649,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0.425846237690326,0.687010689511529,0,0,0,0.390776190804081,0.835218521685727,0,0,0,1.4098700508785,1.49712432326576,0,0.121360521749513,0,0.852408440419239,0,0,0,0,0,0,5.43852784948307,0,0,0,1.0077309914171,0.409074730008619,0,0,0.449341755736634,1.61119057208048,0,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0.455173793141999,0.254253650292766,0.709163045303809,0.344743373241465,0,0,0,0,0,0,0,0,3.48603083260768,0,0,0.227884111694002,0,0,0,0,0,0,0,0.470940769185074,0,0.225595660617181,0,0,0,0,0.421996129056054,0.979396848954886,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0.586993856796269,0.242780379534093,0,0,0,0,0.300646838828985,0,1.99396161812156,1.98595173525299,1.2557316736289,2.38944859545918,1.13843818411917,0.832048038078832,0,0,1.04471047896483,0,0,4.16052224543066,2.48503678093031,4.10577285266046,0,0,0,2.46675464364152,2.78200456384186,0.126621591911757,0,0.64127056201227,0,0.599428828746391,0.144090417154106,0.114536596165916,0.857974989309823,3.45731515171559,0.372757606696298,0,1.35904206073614,1.04602846312333,1.52997326454483,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630265458457789,0.329663433524666,0.337017719270924,0.393709926058995,0,0,0,0,0.275078873194468,0.415440338029185,0,0,0,0,0,0.0524545881349981,0.633602019116439,0.717149357331379,0.383830394638891,0,0,0,0,0,0.653174720218818,0,0.246277562248017,0.681552087141687,0.226624183040251,0,0,0,0.26446520348538,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,1.12482367165896,0,0,0.470531639396343,0,0,0,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0.5778594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| |||
|short_description=p1@LOC340037 | |||
}} |
Latest revision as of 06:27, 17 September 2015
Short description: | p1@LOC340037 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC340037_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_NR_038915, NR_038916, uc003mgt.2_5end |
EntrezGene: | LOC340037 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.50e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.83e-18 | 9 |
upper respiratory tract | 6.03e-08 | 19 |
uterine epithelium | 3.50e-07 | 2 |
cervix epithelium | 3.50e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.34e-07 | 235 |
disease of cellular proliferation | 4.67e-07 | 239 |