Personal tools

FFCP PHASE1:Mm9::chr17:67703838..67703860,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=19274|HGNC=|MCL_coexpression_id=577|UniProt=P28828,Q68FM4,Q6PDN0|association_with_transcript=-39bp_to_ENSMUST00000037974,NM_008984,uc008dka.2,uc008dkb.2,uc012awj.1_5end|description=CAGE_peak_1_at_Ptprm_5end|id=chr17:67703838..67703860,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!2.28e-10!333;UBERON:0002048!2.42e-09!14;UBERON:0000117!2.42e-09!14;UBERON:0000171!2.42e-09!14;UBERON:0000170!2.42e-09!14;UBERON:0005597!2.42e-09!14;UBERON:0000118!2.42e-09!14;UBERON:0000479!1.80e-07!349;UBERON:0004535!1.81e-07!23;UBERON:0001009!1.81e-07!23;UBERON:0005153!5.87e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.36e-09,14;UBERON:0000117,2.36e-09,14;UBERON:0000171,2.36e-09,14;UBERON:0000170,2.36e-09,14;UBERON:0005597,2.36e-09,14;UBERON:0000118,2.36e-09,14;UBERON:0005157,1.12e-07,20;UBERON:0000479,1.45e-07,349;UBERON:0004535,1.77e-07,23;UBERON:0001009,1.77e-07,23;UBERON:0005153,5.76e-07,17|phase1_expression=6.40595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,7.66152452176024,4.25198061518635,3.49780939064073,0.630924330716475,2.87940310572051,3.39511721438424,19.3898701544439,0.397163804803541,0.261199789138935,0.159992422793407,0,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,4.62162591602039,1.99481574430191,6.73758875665818,0,0,0,0,0.683045484958446,0,26.3124349568957,23.2153172492688,13.2153661556411,5.47673941043627,6.5407546914134,10.3252505885202,11.665793944457,5.03951117851305,10.062679505548,0,0,0,8.48956138918625,11.747871037489,14.4388185837684,11.7343547298567,12.1667925232568,13.9442908771359,4.40497891689872,5.33576877666684,7.19919773825119,12.8552627133707,6.3943210345149,5.99200221036809,6.53171119046643,3.62913643079672,4.05017814995072,3.57552434297349,11.1403883917483,10.1599528837742,4.77714116938321,6.61333750025831,5.51531271966013,15.4162233399144,16.0886045987337,15.6678663921368,8.83638127792299,6.67859798297591,7.29278718779464,12.2840519560608,14.6318278608237,14.9742282821274,17.3830865429464,16.7998583342941,13.2343606535963,7.04253597998612,9.97544593409569,51.8857434776003,10.3250865237766,0,0,0.649776417447669,1.34408066129201,9.97155382935438,17.3838929029619,8.83272415649754,12.0135455333516,8.30976176682415,30.7983545794363,30.5766287647975,7.11066703153331,3.89683873820185,4.05375784760158,1.51657333504435,7.76450382089608,11.3932668804756,16.0317510190011,7.63335437770998,8.52503339273995,9.91646638201052,8.13902258984162,13.7578787348775,13.4463252722753,6.42706916109372,55.670752414166,9.73071607144862,25.7209291416381,17.8881629952919,13.091631834651,3.72783522436244,26.6430525280508,30.1603257811375,6.64188343542338,0.11981512450592,0,0.381210681219194,17.3757141709594,16.9275223042892,23.4973638451056,21.38039138365,18.4115129277838,21.8177446787538,17.8465389374533,13.7483141197927,17.416975885413,5.30717792710717,7.57590681191306,8.19758790665033,10.5754968039398,10.4436035287103,15.5225962370787,17.4853802818913,12.2989171473456,12.2749259173245,13.4525752784288,6.89817577385095,13.2374256117473,15.6596500505914,9.42541649438572,21.1315909411454,23.3328951569852,17.4914815946752,13.9323986772945,0.702213187313235,0.257347907114715,0.284163499395593,17.6056906655177,12.6644072389792,15.1252131627252,23.4377288229358,24.7922932001729,19.7461904495844,22.3232586960392,26.2907933371627,34.2122453135807,35.5449275813118,68.95033491322,85.7708004995154,69.7373940018835,50.2769764016506,65.0901130987803,10.3042074796422,8.12946437796347,2.64335026387038,3.17340679996253,10.8777007772969,11.147360249301,11.7269389803105,16.1346819698674,12.6755484991576,13.3157938278791,10.9141684155238,7.90554982675252,15.3314477368164,16.1154742353332,15.4021628824105,18.8752075817387,9.51007419448655,7.36822711041159,7.77638393907635,18.965253093215,16.9061603509621,20.5687841123767,17.2617713579187,31.2104398511918,31.1123762651346,15.941895981797,16.4848664233444,12.4631135561019,5.92905254174298,2.33583148002532,5.30709286805648,2.47348323623339,3.65148218499305,4.3411888755435,5.85639459097266,12.6586300478357,7.62035565842666,6.58947391651396,7.18841032636773,17.1184835927512,10.2972432127805,4.54641980304801,4.30553792452589,10.1313139486307,79.8133781519732,14.2118558827864,27.2151510658183,30.2146252679835,44.3564569265269,82.2455724039315,95.9315872770635,107.128372673932,138.876561957554,138.636895720133,189.75117470241,109.460694230113,128.650311490092,108.197495818971,0,1.63171705145613,8.85175691434265,7.45029215022778,19.266070798535,15.1203075703942,4.59017847054691,28.0242729196854,15.4599027513966,20.6932534477218,31.4518160689886,28.4372869563537,30.523418349288,39.6307143104365,19.8357243820698,26.8875389278407,24.1125544547379,49.1621614125365,21.149072696032,10.5058706163681,14.8227133011754,18.6416238958965,25.2215762845929,7.04063844849446,7.86041248108353,7.16699303072413,10.9261700365886,23.0576360957946,22.224833212467,16.7225515559653,21.746340081468,25.2829406348653,18.9753495434998,16.5016869197099,17.702859499197,14.2248264284735,6.72665155670323,12.2172109968008,17.3793428969428,15.161349496176,14.1512157717824,12.178597964584,6.57080782578389,19.0648863777438,3.52845436887939,10.7176064411962,23.7352707242981,16.2241768056739,12.0566067443168,10.5050175836839,11.3677526285642,16.1320012749143,10.9357363710626,12.5895989457566,10.3708935327039,6.78126445216888,5.05768642567793,14.6418030852174,1.01987057996313,0.69975726161829,1.52019971184866,3.81868247206045,7.43389584915668,22.3651413839534,12.8526355577944,13.5907392409405,13.9752040797554,12.4075198674035,14.4643547519338,12.3025292732494,7.77689839750757,14.9121435140862,0,7.62534384824292,10.7548018797113,11.8615224889869,7.74958940866387,7.94093789806657,12.2051528191584,15.2339130267422,10.3810750981454,4.34851417486811,4.32045009386798,0.948033361884535,3.44632865993279,4.62199307241723,2.46849563657811,4.65469408735452,4.37098980518783,2.52410443991935,2.80610101631697,2.52416124870369,2.59103142626999,2.31900225814733,1.36441033035653,2.30908419936791,1.98690733708667,17.2315091547561,1.10992976687032,0,0.503653849092235,17.9666322449937,15.7653279378993,10.0733393346996,7.28852488868824,2.50786052017682,15.8130515932779,11.5081309126794,16.0410743763031,14.4356673168698,10.2762377965596,18.1294535373528,10.1253375034771,18.463169332193,12.2348450425735,14.497288729051,2.17953429926771,15.9609949360412,12.6342868258059,24.0675649897611,3.35381060204772,8.27295788025063,19.5577120465421,23.6940315824728,29.2036480728552,19.4576853058124,27.6292436880361,24.1441716974178,24.4404334496393,29.2594946490253,28.6028635398954,22.3858034903045,29.5505031159381,26.814381644455,30.0822707586414,30.1757786275515,18.172070376427,22.0069999637578,22.8898742349428,22.5286945780109,24.8448764296473,26.8228307016615,27.6221239037887,18.414879800649,28.6546680214768,28.0571135828869,27.0487841323117,27.5812550651578,21.2800142448238,29.9028103488914,21.6055404298878,20.9840885467875,26.2003401458857,27.2886238641339,29.4584031386019,26.6915617134614,27.8241402744506|short_description=p1@Ptprm}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19274
|HGNC=
|MCL_coexpression_id=577
|TSSclassifier=NA
|UniProt=P28828,Q68FM4,Q6PDN0
|association_with_transcript=-39bp_to_ENSMUST00000037974,NM_008984,uc008dka.2,uc008dkb.2,uc012awj.1_5end
|cluster_id=chr17:67703838..67703860,-
|description=CAGE_peak_1_at_Ptprm_5end
|id=chr17:67703838..67703860,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!2.28e-10!333;UBERON:0002048!2.42e-09!14;UBERON:0000117!2.42e-09!14;UBERON:0000171!2.42e-09!14;UBERON:0000170!2.42e-09!14;UBERON:0005597!2.42e-09!14;UBERON:0000118!2.42e-09!14;UBERON:0000479!1.80e-07!349;UBERON:0004535!1.81e-07!23;UBERON:0001009!1.81e-07!23;UBERON:0005153!5.87e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.36e-09,14;UBERON:0000117,2.36e-09,14;UBERON:0000171,2.36e-09,14;UBERON:0000170,2.36e-09,14;UBERON:0005597,2.36e-09,14;UBERON:0000118,2.36e-09,14;UBERON:0005157,1.12e-07,20;UBERON:0000479,1.45e-07,349;UBERON:0004535,1.77e-07,23;UBERON:0001009,1.77e-07,23;UBERON:0005153,5.76e-07,17
|phase1_expression=6.40595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,7.66152452176024,4.25198061518635,3.49780939064073,0.630924330716475,2.87940310572051,3.39511721438424,19.3898701544439,0.397163804803541,0.261199789138935,0.159992422793407,0,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,4.62162591602039,1.99481574430191,6.73758875665818,0,0,0,0,0.683045484958446,0,26.3124349568957,23.2153172492688,13.2153661556411,5.47673941043627,6.5407546914134,10.3252505885202,11.665793944457,5.03951117851305,10.062679505548,0,0,0,8.48956138918625,11.747871037489,14.4388185837684,11.7343547298567,12.1667925232568,13.9442908771359,4.40497891689872,5.33576877666684,7.19919773825119,12.8552627133707,6.3943210345149,5.99200221036809,6.53171119046643,3.62913643079672,4.05017814995072,3.57552434297349,11.1403883917483,10.1599528837742,4.77714116938321,6.61333750025831,5.51531271966013,15.4162233399144,16.0886045987337,15.6678663921368,8.83638127792299,6.67859798297591,7.29278718779464,12.2840519560608,14.6318278608237,14.9742282821274,17.3830865429464,16.7998583342941,13.2343606535963,7.04253597998612,9.97544593409569,51.8857434776003,10.3250865237766,0,0,0.649776417447669,1.34408066129201,9.97155382935438,17.3838929029619,8.83272415649754,12.0135455333516,8.30976176682415,30.7983545794363,30.5766287647975,7.11066703153331,3.89683873820185,4.05375784760158,1.51657333504435,7.76450382089608,11.3932668804756,16.0317510190011,7.63335437770998,8.52503339273995,9.91646638201052,8.13902258984162,13.7578787348775,13.4463252722753,6.42706916109372,55.670752414166,9.73071607144862,25.7209291416381,17.8881629952919,13.091631834651,3.72783522436244,26.6430525280508,30.1603257811375,6.64188343542338,0.11981512450592,0,0.381210681219194,17.3757141709594,16.9275223042892,23.4973638451056,21.38039138365,18.4115129277838,21.8177446787538,17.8465389374533,13.7483141197927,17.416975885413,5.30717792710717,7.57590681191306,8.19758790665033,10.5754968039398,10.4436035287103,15.5225962370787,17.4853802818913,12.2989171473456,12.2749259173245,13.4525752784288,6.89817577385095,13.2374256117473,15.6596500505914,9.42541649438572,21.1315909411454,23.3328951569852,17.4914815946752,13.9323986772945,0.702213187313235,0.257347907114715,0.284163499395593,17.6056906655177,12.6644072389792,15.1252131627252,23.4377288229358,24.7922932001729,19.7461904495844,22.3232586960392,26.2907933371627,34.2122453135807,35.5449275813118,68.95033491322,85.7708004995154,69.7373940018835,50.2769764016506,65.0901130987803,10.3042074796422,8.12946437796347,2.64335026387038,3.17340679996253,10.8777007772969,11.147360249301,11.7269389803105,16.1346819698674,12.6755484991576,13.3157938278791,10.9141684155238,7.90554982675252,15.3314477368164,16.1154742353332,15.4021628824105,18.8752075817387,9.51007419448655,7.36822711041159,7.77638393907635,18.965253093215,16.9061603509621,20.5687841123767,17.2617713579187,31.2104398511918,31.1123762651346,15.941895981797,16.4848664233444,12.4631135561019,5.92905254174298,2.33583148002532,5.30709286805648,2.47348323623339,3.65148218499305,4.3411888755435,5.85639459097266,12.6586300478357,7.62035565842666,6.58947391651396,7.18841032636773,17.1184835927512,10.2972432127805,4.54641980304801,4.30553792452589,10.1313139486307,79.8133781519732,14.2118558827864,27.2151510658183,30.2146252679835,44.3564569265269,82.2455724039315,95.9315872770635,107.128372673932,138.876561957554,138.636895720133,189.75117470241,109.460694230113,128.650311490092,108.197495818971,0,1.63171705145613,8.85175691434265,7.45029215022778,19.266070798535,15.1203075703942,4.59017847054691,28.0242729196854,15.4599027513966,20.6932534477218,31.4518160689886,28.4372869563537,30.523418349288,39.6307143104365,19.8357243820698,26.8875389278407,24.1125544547379,49.1621614125365,21.149072696032,10.5058706163681,14.8227133011754,18.6416238958965,25.2215762845929,7.04063844849446,7.86041248108353,7.16699303072413,10.9261700365886,23.0576360957946,22.224833212467,16.7225515559653,21.746340081468,25.2829406348653,18.9753495434998,16.5016869197099,17.702859499197,14.2248264284735,6.72665155670323,12.2172109968008,17.3793428969428,15.161349496176,14.1512157717824,12.178597964584,6.57080782578389,19.0648863777438,3.52845436887939,10.7176064411962,23.7352707242981,16.2241768056739,12.0566067443168,10.5050175836839,11.3677526285642,16.1320012749143,10.9357363710626,12.5895989457566,10.3708935327039,6.78126445216888,5.05768642567793,14.6418030852174,1.01987057996313,0.69975726161829,1.52019971184866,3.81868247206045,7.43389584915668,22.3651413839534,12.8526355577944,13.5907392409405,13.9752040797554,12.4075198674035,14.4643547519338,12.3025292732494,7.77689839750757,14.9121435140862,0,7.62534384824292,10.7548018797113,11.8615224889869,7.74958940866387,7.94093789806657,12.2051528191584,15.2339130267422,10.3810750981454,4.34851417486811,4.32045009386798,0.948033361884535,3.44632865993279,4.62199307241723,2.46849563657811,4.65469408735452,4.37098980518783,2.52410443991935,2.80610101631697,2.52416124870369,2.59103142626999,2.31900225814733,1.36441033035653,2.30908419936791,1.98690733708667,17.2315091547561,1.10992976687032,0,0.503653849092235,17.9666322449937,15.7653279378993,10.0733393346996,7.28852488868824,2.50786052017682,15.8130515932779,11.5081309126794,16.0410743763031,14.4356673168698,10.2762377965596,18.1294535373528,10.1253375034771,18.463169332193,12.2348450425735,14.497288729051,2.17953429926771,15.9609949360412,12.6342868258059,24.0675649897611,3.35381060204772,8.27295788025063,19.5577120465421,23.6940315824728,29.2036480728552,19.4576853058124,27.6292436880361,24.1441716974178,24.4404334496393,29.2594946490253,28.6028635398954,22.3858034903045,29.5505031159381,26.814381644455,30.0822707586414,30.1757786275515,18.172070376427,22.0069999637578,22.8898742349428,22.5286945780109,24.8448764296473,26.8228307016615,27.6221239037887,18.414879800649,28.6546680214768,28.0571135828869,27.0487841323117,27.5812550651578,21.2800142448238,29.9028103488914,21.6055404298878,20.9840885467875,26.2003401458857,27.2886238641339,29.4584031386019,26.6915617134614,27.8241402744506
|short_description=p1@Ptprm
}}

Latest revision as of 19:33, 26 September 2015

Short description:p1@Ptprm
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ptprm_5end
Coexpression cluster:MCL_coexpression_mm9:577
Association with transcript: -39bp_to_ENSMUST00000037974, NM_008984, uc008dka.2, uc008dkb.2, uc012awj.1_5end
EntrezGene:Ptprm
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ptprm

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D826.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D923.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.54
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.49
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.44
Mouse Granule cells, donor1.CNhs12131.11713-123C311.73
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C85.99
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.16
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.61
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.84
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.38
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.23
Mouse Schwann, donor1.CNhs12507.11728-123D97.04
Mouse Schwann, donor2.CNhs12573.11746-123F99.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G351.89
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I717.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.31
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H130.80
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.76
accessory axillary lymph node, adult.CNhs10475.1063-29H911.39
adrenal gland, adult.CNhs10508.49-24D716.03
adrenal gland, embryo E14.CNhs11038.406-44C57.63
adrenal gland, embryo E16.CNhs11004.1254-43D68.53
adrenal gland, embryo E17.CNhs11043.1263-45I19.92
adrenal gland, embryo E18.CNhs11026.1262-18F58.14
adrenal gland, neonate N00.CNhs11191.1311-23C113.76
adrenal gland, neonate N25.CNhs11223.1377-27I313.45
amnion, adult pregnant day17.5.CNhs10488.583-22A86.43
aorta, adult.CNhs10498.46-23H155.67
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F525.72
bone (os femoris), neonate N16.CNhs11225.1525-43A617.89
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B226.64
cerebellum, neonate N30.CNhs11135.1395-42I230.16
colon, adult.CNhs10468.36-18H76.64
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A417.38
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F123.50
cortex, adult.CNhs10473.12-14D521.38
cortex, neonate N30.CNhs11107.1392-42F218.41
diencephalon, adult.CNhs10482.20-12F221.82
diencephalon, neonate N30.CNhs11201.1388-42B217.85
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.42
epididymis, adult.CNhs10490.58-23B25.31
eyeball, adult.CNhs10484.31-12G47.58
eyeball, embryo E12.CNhs11016.345-16C68.20
eyeball, embryo E14.CNhs10521.399-16E210.58
eyeball, embryo E15.CNhs10593.426-16C910.44
eyeball, embryo E17.CNhs11023.1261-18D415.52
eyeball, neonate N00.CNhs11207.633-15C617.49
eyeball, neonate N01.CNhs11140.1532-43E712.30
eyeball, neonate N02.CNhs11205.1551-44G812.27
eyeball, neonate N16.CNhs11188.777-19A213.45
forelimb, embryo E11.CNhs10596.335-25E26.90
forelimb, embryo E12.CNhs10600.359-14H213.24
forelimb, embryo E13.CNhs10589.384-1E215.66
forelimb, embryo E14.CNhs10577.413-26A89.43
forelimb, embryo E15.CNhs11007.437-20E721.13
forelimb, embryo E17.CNhs10598.1517-43C423.33
forelimb, embryo E18.CNhs11008.1520-43B517.49
gonad, embryo E13.CNhs11044.1564-45I613.93
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E917.61
heart, embryo E12.CNhs11015.353-12F512.66
heart, embryo E13.CNhs11013.376-3I915.13
heart, embryo E14.CNhs10597.403-26D423.44
heart, embryo E15.CNhs11017.431-16C824.79
heart, embryo E16.CNhs11021.457-17C619.75
heart, embryo E17.CNhs11025.479-18E522.32
heart, embryo E18.CNhs11030.1283-20G326.29
heart, neonate N00.CNhs11213.639-21E334.21
heart, neonate N03.CNhs11221.1349-25I235.54
heart, neonate N10.CNhs11118.749-24G168.95
heart, neonate N16.CNhs11209.782-15G185.77
heart, neonate N20.CNhs11127.821-26I669.74
heart, neonate N25.CNhs11196.1351-25D350.28
heart, neonate N30.CNhs11202.1390-42D265.09
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G18.13
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I510.88
intestine, embryo E13.CNhs11010.381-16D511.15
intestine, embryo E15.CNhs10602.976-16D811.73
intestine, embryo E16.CNhs10585.463-22H416.13
intestine, embryo E17.CNhs10582.482-18D312.68
intestine, embryo E18.CNhs10526.1289-20F713.32
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E97.91
intestine, neonate N06.CNhs11102.688-20B815.33
intestine, neonate N07.CNhs11095.720-20F216.12
intestine, neonate N10.CNhs11098.755-23A515.40
intestine, neonate N20.CNhs11187.827-18D118.88
intestine, neonate N25.CNhs11121.1352-25E39.51
intestine, neonate N30.CNhs11131.1384-42G17.37
kidney, embryo E14.CNhs10606.411-4I97.78
kidney, embryo E15.CNhs10997.434-16F818.97
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I220.57
kidney, embryo E18.CNhs11001.1288-20C717.26
kidney, neonate N00.CNhs11214.646-21G731.21
kidney, neonate N10.CNhs11206.758-6D531.11
kidney, neonate N20.CNhs11113.832-19I115.94
kidney, neonate N25.CNhs11122.1353-25F316.48
kidney, neonate N30.CNhs11203.1385-42H112.46
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H65.31
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A35.86
liver, embryo E18.CNhs10579.499-43G412.66
liver, neonate N00.CNhs11117.641-24F47.62
liver, neonate N03.CNhs11123.1345-25G26.59
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H217.12
liver, neonate N10.CNhs11115.751-24B910.30
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H14.31
liver, neonate N30.CNhs11106.1382-42D110.13
lung, adult.CNhs10474.28-22B179.81
lung, embryo E12.CNhs10522.354-16G214.21
lung, embryo E14.CNhs10604.404-26F827.22
lung, embryo E15.CNhs11020.432-17C530.21
lung, embryo E16.CNhs10998.458-17B644.36
lung, embryo E17.CNhs10605.480-44A682.25
lung, embryo E18.CNhs10583.1287-20I695.93
lung, neonate N00.CNhs11224.640-42C6107.13
lung, neonate N06.CNhs11212.683-20E5138.88
lung, neonate N07.CNhs11111.715-19A3138.64
lung, neonate N10.CNhs11219.750-23E6189.75
lung, neonate N20.CNhs11109.822-18A4109.46
lung, neonate N25.CNhs11119.1359-25C7128.65
lung, neonate N30.CNhs11133.1394-42H2108.20
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B68.85
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C219.27
medulla oblongata, neonate N30.CNhs11200.1396-42A315.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.59
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C228.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.46
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E220.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E331.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D728.44
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D830.52
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D939.63
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.84
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D526.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D624.11
olfactory brain, adult.CNhs10489.18-22I949.16
ovary, adult.CNhs10507.91-2I721.15
ovary, embryo E18.CNhs11040.505-44H710.51
ovary, neonate N00.CNhs11217.1299-22I414.82
oviduct, adult pregnant day01.CNhs10500.988-6G618.64
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F47.04
pancreas, embryo E15.CNhs11042.1556-45F27.86
pancreas, embryo E16.CNhs11003.460-26E57.17
pancreas, embryo E17.CNhs10599.1558-45G310.93
pancreas, embryo E18.CNhs10580.1535-43I723.06
pancreas, neonate N00.CNhs11105.645-26G922.22
pancreas, neonate N01.CNhs11138.1531-43D716.72
pancreas, neonate N02.CNhs11139.1539-43D821.75
pancreas, neonate N16.CNhs11136.787-43B625.28
pancreas, neonate N25.CNhs11094.1555-45E218.98
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G817.70
pituitary gland, embryo E12.CNhs11018.346-16E614.22
pituitary gland, embryo E13.CNhs11009.370-44C76.73
pituitary gland, embryo E14.CNhs11037.398-44A512.22
pituitary gland, embryo E15.CNhs10592.427-16B917.38
pituitary gland, embryo E16.CNhs11036.449-43F615.16
pituitary gland, embryo E17.CNhs11039.1265-44F514.15
pituitary gland, neonate N00.CNhs11190.1308-22E912.18
placenta, adult pregnant day10.CNhs10472.539-13I76.57
placenta, adult pregnant day17.CNhs10464.577-18G319.06
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C310.72
skin, neonate N00.CNhs11124.650-25G423.74
skin, neonate N03.CNhs11215.662-22H316.22
skin, neonate N06.CNhs11097.693-20I512.06
skin, neonate N10.CNhs11108.762-6C410.51
small intestine, neonate N16.CNhs11114.790-21I111.37
spinal cord, adult.CNhs10505.24-13C916.13
spleen, adult.CNhs10465.25-2G210.94
spleen, embryo E16.CNhs11035.461-43C112.59
spleen, embryo E18.CNhs11011.1271-21F210.37
spleen, neonate N10.CNhs11116.752-24D16.78
spleen, neonate N20.CNhs11112.824-19H15.06
spleen, neonate N25.CNhs11099.1354-25G314.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E37.43
stomach, embryo E15.CNhs10603.1252-16G822.37
stomach, embryo E16.CNhs11022.459-17D412.85
stomach, embryo E17.CNhs11006.1035-18D513.59
stomach, embryo E18.CNhs10999.1286-20C613.98
stomach, neonate N03.CNhs11193.1340-24B812.41
stomach, neonate N07.CNhs11210.718-18A914.46
stomach, neonate N25.CNhs11104.1355-25E412.30
stomach, neonate N30.CNhs11134.1386-42I17.78
submandibular gland, adult.CNhs10469.59-29C114.91
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F57.63
testis, embryo E15.CNhs11034.443-27C510.75
testis, embryo E16.CNhs11033.470-26G511.86
testis, embryo E17.CNhs11029.486-18I57.75
testis, embryo E18.CNhs11027.503-18G57.94
testis, neonate N00.CNhs11189.1300-22B712.21
testis, neonate N07.CNhs11222.726-26I415.23
testis, neonate N10.CNhs11204.763-44D910.38
testis, neonate N20.CNhs11110.839-18H34.35
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I24.62
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C14.65
thymus, embryo E18.CNhs10595.1273-19G44.37
thymus, neonate N02.CNhs11181.1541-43F82.52
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D32.59
thymus, neonate N10.CNhs11194.748-24E42.32
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B417.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E417.97
uterus, adult pregnant day19.CNhs10497.590-15F515.77
uterus, adult.CNhs10509.92-27E510.07
vagina, adult.CNhs10502.89-27D57.29
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C915.96
whole body, embryo E13.CNhs10512.372-23H212.63
whole body, embryo E14.5.CNhs10578.420-27D224.07
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F28.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G523.69
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G529.20
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.46
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G527.63
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G524.44
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G529.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G528.60
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G522.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G529.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G526.81
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G530.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G530.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.01
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.53
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G524.84
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.82
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G527.62
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.41
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G528.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G528.06
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G527.05
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G527.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G529.90
whole body, embryo E17.5.CNhs10513.490-9F921.61
whole body, embryo E17.CNhs10517.475-3I520.98
whole body, embryo E18.CNhs10516.493-3B326.20
whole body, neonate N00.CNhs10525.657-19C227.29
whole body, neonate N01.CNhs10576.659-23C629.46
whole body, neonate N06.CNhs10515.692-21D126.69
whole body, neonate N10.CNhs10518.761-6B427.82





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung2.36e-0914
respiratory tube2.36e-0914
respiration organ2.36e-0914
pair of lungs2.36e-0914
lung primordium2.36e-0914
lung bud2.36e-0914
epithelial fold1.12e-0720
tissue1.45e-07349
cardiovascular system1.77e-0723
circulatory system1.77e-0723
epithelial bud5.76e-0717
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:67703838..67703860,-&oldid=4270469"