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FFCP PHASE1:Mm9::chr18:4920507..4920584,+: Difference between revisions

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{{FFCP|EntrezGene=225115|HGNC=|MCL_coexpression_id=3|UniProt=Q8K4L3,E9PVA9,Q8C9L0|association_with_transcript=0bp_to_ENSMUST00000025079,ENSMUST00000055015,ENSMUST00000126977,ENSMUST00000131210,uc008dym.2,uc008dyn.2,uc008dyo.2_5end|description=CAGE_peak_1_at_Svil_5end|id=chr18:4920507..4920584,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!2.57e-15!193;UBERON:0004120!2.57e-15!193;UBERON:0006603!2.57e-15!193;UBERON:0003104!2.52e-13!131;UBERON:0009142!2.52e-13!131;UBERON:0000464!1.26e-10!57;UBERON:0001048!5.77e-10!147;UBERON:0001041!7.62e-10!92;UBERON:0000077!1.46e-09!97;UBERON:0000466!1.83e-09!79;UBERON:0002048!3.82e-08!14;UBERON:0000117!3.82e-08!14;UBERON:0000171!3.82e-08!14;UBERON:0000170!3.82e-08!14;UBERON:0005597!3.82e-08!14;UBERON:0000118!3.82e-08!14;UBERON:0004921!2.59e-07!126;UBERON:0004185!2.59e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.26e-08,90;UBERON:0002048,3.82e-08,14;UBERON:0000117,3.82e-08,14;UBERON:0000171,3.82e-08,14;UBERON:0000170,3.82e-08,14;UBERON:0005597,3.82e-08,14;UBERON:0000118,3.82e-08,14;UBERON:0005177,7.17e-08,79;UBERON:0001048,1.66e-07,134;UBERON:0001041,1.96e-07,80|phase1_expression=34.5921509746355,12.563114675017,18.1999695755814,15.4256747766483,18.5331420080148,5.54001597309236,7.00837921786577,34.3468040354593,38.7168985917084,45.4085181064667,31.1616702170419,35.6581550709154,47.2514014610128,40.2133851127388,12.3250611871795,17.412872995525,15.3903613188192,14.0380663584416,19.3331351384092,19.0975343309114,21.6860389885228,0.992909512008853,1.82839852397255,6.71968175732308,5.96464130774642,13.2073351746455,12.0613358924541,7.75696437669201,6.27077284206034,7.05684363327806,8.20402889424627,9.52546010189447,7.99584223859941,0,7.79899373328441,6.64938581433969,7.75843553797003,241.074219304459,142.984368047855,182.709786646856,305.292142288096,285.51301271263,207.312920744303,23.1650145075062,23.9249557678054,10.6457116253775,12.5182615095686,9.15705656797875,7.46933021297204,7.38833616482277,21.2779360870551,7.18762821824858,8.72469551500229,36.9934692425786,39.6590682988108,17.2363822144084,36.1032134322833,22.6895720602075,2.83243045203437,2.11596391708813,7.60597684207415,13.8926258148344,13.3394219416671,6.74924787961049,2.96659908770092,10.6572017241915,8.38880309451533,8.06858441175265,6.73982480005105,5.40023753326763,4.83747411108179,6.56997264128748,9.27647871996777,4.40966877173835,4.69642807989358,3.67687514644008,5.50579404996943,3.95830748064082,3.68655679814984,3.03338461779446,3.20206752608434,3.64639359389732,2.23346399201105,2.8138130501584,5.04234217663473,15.6153150301044,9.5389026135399,10.0655700745662,4.54357159999104,15.2654551415707,52.175607966302,18.9293252935905,13.599426674155,14.5719861742211,31.1892680374881,21.5052905806721,16.1511083151515,7.32850387085648,7.27400812888033,4.59341446863442,11.2674735821344,12.8326477414318,10.1922095882658,21.3320010945999,12.5564803786504,14.6948721975557,13.1436355703844,15.6431915215112,29.7778566194247,44.2357574413178,27.7576522825817,34.7090645275841,25.5983201954225,26.2257394561563,32.4544831694545,26.6413173618912,15.5732829672656,40.7770186514151,73.4226758118396,35.1034064385878,36.6596920644253,34.911018225736,29.8226817948995,6.14839673724249,6.49284791121711,25.5457055208591,14.1381846916986,9.59844369589452,10.9280395282836,6.14141621559773,6.40500843946077,3.5183218591602,4.17178368461463,5.37002460393694,4.1557608911912,7.13861557498134,59.0668310331834,43.6668466841426,34.3702951469798,8.62811609134543,19.2578255584801,18.8519725635448,25.0286360429435,31.4973069276644,23.6086652055108,22.8042422107033,18.9277483610652,19.4027528054262,20.6945273215529,45.9527774807801,62.6386002023658,47.5654739367837,78.4093242816186,57.4616074761575,62.9693337408307,39.2097505632432,7.02213187313235,8.74982884190032,11.3665399758237,28.1691050648283,30.2538617375614,25.9289368503861,35.2749656021963,31.0887486160898,34.247299060998,27.9040733700489,33.2659017735528,26.9727940868162,26.0004562863299,28.5651387497626,21.888578577381,18.8597983778679,22.1745616443961,26.4386644957932,5.04695876553905,7.71784592844633,34.363553430315,19.3048913664387,32.2065258308203,46.9118077158086,44.3304066948001,37.9165026291884,35.5804870151793,33.8601614480355,26.5736274464927,26.5165317105658,32.4222419352348,34.4194696631191,37.0431765526328,40.44687338944,17.5071820398502,19.515844778928,18.0184505905428,36.7880210603327,34.9393980586549,40.7302655690629,38.2086399720223,30.7896249318498,43.000845244495,24.503284564614,25.2767951824613,18.6329717521919,19.2694207606647,25.1936109631302,28.5010542914144,21.3619006765611,29.8204378441099,34.729511004348,37.4300002118687,37.6881940060562,18.6455510791291,24.4359657737393,35.9420516318386,34.9812490808393,39.3167468124346,33.845569644913,23.5010611713705,24.6046195895317,55.4259570499814,30.3186258832776,47.4228081446295,45.49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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=225115
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=Q8K4L3,E9PVA9,Q8C9L0
|association_with_transcript=0bp_to_ENSMUST00000025079,ENSMUST00000055015,ENSMUST00000126977,ENSMUST00000131210,uc008dym.2,uc008dyn.2,uc008dyo.2_5end
|cluster_id=chr18:4920507..4920584,+
|description=CAGE_peak_1_at_Svil_5end
|id=chr18:4920507..4920584,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!2.57e-15!193;UBERON:0004120!2.57e-15!193;UBERON:0006603!2.57e-15!193;UBERON:0003104!2.52e-13!131;UBERON:0009142!2.52e-13!131;UBERON:0000464!1.26e-10!57;UBERON:0001048!5.77e-10!147;UBERON:0001041!7.62e-10!92;UBERON:0000077!1.46e-09!97;UBERON:0000466!1.83e-09!79;UBERON:0002048!3.82e-08!14;UBERON:0000117!3.82e-08!14;UBERON:0000171!3.82e-08!14;UBERON:0000170!3.82e-08!14;UBERON:0005597!3.82e-08!14;UBERON:0000118!3.82e-08!14;UBERON:0004921!2.59e-07!126;UBERON:0004185!2.59e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.26e-08,90;UBERON:0002048,3.82e-08,14;UBERON:0000117,3.82e-08,14;UBERON:0000171,3.82e-08,14;UBERON:0000170,3.82e-08,14;UBERON:0005597,3.82e-08,14;UBERON:0000118,3.82e-08,14;UBERON:0005177,7.17e-08,79;UBERON:0001048,1.66e-07,134;UBERON:0001041,1.96e-07,80
|phase1_expression=34.5921509746355,12.563114675017,18.1999695755814,15.4256747766483,18.5331420080148,5.54001597309236,7.00837921786577,34.3468040354593,38.7168985917084,45.4085181064667,31.1616702170419,35.6581550709154,47.2514014610128,40.2133851127388,12.3250611871795,17.412872995525,15.3903613188192,14.0380663584416,19.3331351384092,19.0975343309114,21.6860389885228,0.992909512008853,1.82839852397255,6.71968175732308,5.96464130774642,13.2073351746455,12.0613358924541,7.75696437669201,6.27077284206034,7.05684363327806,8.20402889424627,9.52546010189447,7.99584223859941,0,7.79899373328441,6.64938581433969,7.75843553797003,241.074219304459,142.984368047855,182.709786646856,305.292142288096,285.51301271263,207.312920744303,23.1650145075062,23.9249557678054,10.6457116253775,12.5182615095686,9.15705656797875,7.46933021297204,7.38833616482277,21.2779360870551,7.18762821824858,8.72469551500229,36.9934692425786,39.6590682988108,17.2363822144084,36.1032134322833,22.6895720602075,2.83243045203437,2.11596391708813,7.60597684207415,13.8926258148344,13.3394219416671,6.74924787961049,2.96659908770092,10.6572017241915,8.38880309451533,8.06858441175265,6.73982480005105,5.40023753326763,4.83747411108179,6.56997264128748,9.27647871996777,4.40966877173835,4.69642807989358,3.67687514644008,5.50579404996943,3.95830748064082,3.68655679814984,3.03338461779446,3.20206752608434,3.64639359389732,2.23346399201105,2.8138130501584,5.04234217663473,15.6153150301044,9.5389026135399,10.0655700745662,4.54357159999104,15.2654551415707,52.175607966302,18.9293252935905,13.599426674155,14.5719861742211,31.1892680374881,21.5052905806721,16.1511083151515,7.32850387085648,7.27400812888033,4.59341446863442,11.2674735821344,12.8326477414318,10.1922095882658,21.3320010945999,12.5564803786504,14.6948721975557,13.1436355703844,15.6431915215112,29.7778566194247,44.2357574413178,27.7576522825817,34.7090645275841,25.5983201954225,26.2257394561563,32.4544831694545,26.6413173618912,15.5732829672656,40.7770186514151,73.4226758118396,35.1034064385878,36.6596920644253,34.911018225736,29.8226817948995,6.14839673724249,6.49284791121711,25.5457055208591,14.1381846916986,9.59844369589452,10.9280395282836,6.14141621559773,6.40500843946077,3.5183218591602,4.17178368461463,5.37002460393694,4.1557608911912,7.13861557498134,59.0668310331834,43.6668466841426,34.3702951469798,8.62811609134543,19.2578255584801,18.8519725635448,25.0286360429435,31.4973069276644,23.6086652055108,22.8042422107033,18.9277483610652,19.4027528054262,20.6945273215529,45.9527774807801,62.6386002023658,47.5654739367837,78.4093242816186,57.4616074761575,62.9693337408307,39.2097505632432,7.02213187313235,8.74982884190032,11.3665399758237,28.1691050648283,30.2538617375614,25.9289368503861,35.2749656021963,31.0887486160898,34.247299060998,27.9040733700489,33.2659017735528,26.9727940868162,26.0004562863299,28.5651387497626,21.888578577381,18.8597983778679,22.1745616443961,26.4386644957932,5.04695876553905,7.71784592844633,34.363553430315,19.3048913664387,32.2065258308203,46.9118077158086,44.3304066948001,37.9165026291884,35.5804870151793,33.8601614480355,26.5736274464927,26.5165317105658,32.4222419352348,34.4194696631191,37.0431765526328,40.44687338944,17.5071820398502,19.515844778928,18.0184505905428,36.7880210603327,34.9393980586549,40.7302655690629,38.2086399720223,30.7896249318498,43.000845244495,24.503284564614,25.2767951824613,18.6329717521919,19.2694207606647,25.1936109631302,28.5010542914144,21.3619006765611,29.8204378441099,34.729511004348,37.4300002118687,37.6881940060562,18.6455510791291,24.4359657737393,35.9420516318386,34.9812490808393,39.3167468124346,33.845569644913,23.5010611713705,24.6046195895317,55.4259570499814,30.3186258832776,47.4228081446295,45.4916829877504,53.27468636149,78.8954472550952,86.885928923395,75.1264544252525,74.5614231622283,67.5467303428764,63.1440883883649,57.516023465224,59.2309487800022,60.0293593113273,7.53956419696361,11.4220193601929,17.7035138286853,20.1433824802455,5.61927064957272,8.43924143463863,9.01642199571715,19.9452032491455,8.83423014365519,3.51394869866975,9.04778270477756,9.79772071605463,16.932699230262,20.9476632783736,6.8817819284732,6.13737301613755,5.92931666919785,18.315315036043,43.0078458181054,41.4892856544705,48.8660878060728,88.7539261592241,43.8058956521877,33.5037277893874,33.8602383800521,33.5717041965499,32.1879063240042,40.8888746765424,39.5395288547378,49.0770534794632,42.0666906493971,40.4527050157844,42.1674434299995,43.3169281642385,11.9153862013826,26.4689808226026,27.424040961944,28.935499729265,30.1478397191865,31.9280183507706,33.7325492234348,19.790221692449,15.9576761483323,8.47328283455281,9.2621927183084,32.8123643353545,50.6998299825143,37.152761755744,28.1718731847402,33.6488844477376,23.0269860937582,7.04616147639937,27.3393409276564,46.6434321596883,32.779431344439,28.632005464713,23.9214898511794,24.0217081866849,12.7483822495391,12.1757763521582,16.307596908922,13.3653886522116,35.4296312810872,70.9584940272702,63.0751190399319,61.8901356202827,54.8090035002906,74.3102548580362,72.3217737596689,43.974998253317,33.181433162699,30.4456263412594,2.25477175473676,52.6298242074805,46.1629188375302,58.9187100682464,54.2471258606471,59.6415122982447,58.4439048455855,52.211958322424,33.4501308718018,13.5287107662563,11.2331702440568,31.2851009421896,34.0578361687476,34.4081706502171,34.6888597350713,40.9971133078532,28.2127523789396,27.5247579400729,27.3225625272968,26.5541763363628,30.5589294686549,28.6346365788627,34.1102582589133,31.5574840580281,36.2318396762864,20.8591952925994,21.0886655705361,14.6233586273445,25.1826924546118,67.4231683172345,69.2548334414862,74.1764078282424,42.444939057655,25.5801773058035,3.95326289831947,1.84130094602871,8.02053718815155,2.749650917499,2.74033007908257,1.5107877947794,0,3.60256962579376,2.26571204492102,3.10656187051092,10.1711600632493,44.2917609475144,39.439462929205,38.1677545797222,24.105513702218,22.7965950478018,43.5603586491166,45.7397827070345,42.3613356661196,38.1572789763334,40.5566879824384,44.1385638843418,38.5803010775916,40.8480472343066,39.4581671725063,40.0086700677782,40.5595140806994,37.0385703290314,41.2085900803307,45.0428695611256,47.6588260815727,45.7887579891091,38.3882265815187,39.824918157258,37.8319709269629,39.8534803169796,42.0734337607377,44.9849206558711,38.7041724460706,42.6468126459881,45.7931169959312,43.9329991395013,37.2400249284417,38.5792734553055,43.596894081738,33.2248068657468,37.4290573512653,37.3875634044039,34.6231881044607,26.6915617134614,26.6648010963485
|short_description=p1@Svil
}}

Latest revision as of 08:30, 27 September 2015

Short description:p1@Svil
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Svil_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 0bp_to_ENSMUST00000025079, ENSMUST00000055015, ENSMUST00000126977, ENSMUST00000131210, uc008dym.2, uc008dyn.2, uc008dyo.2_5end
EntrezGene:Svil
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Svil

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G734.59
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.20
CD326+ enterocyte, pool1.CNhs13542.11848-124I315.43
CD326+ enterocyte, pool2.CNhs13197.11849-124I418.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.01
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E934.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E738.72
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F245.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E631.16
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F135.66
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E447.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E840.21
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A317.41
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A515.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.04
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A419.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.10
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H913.21
GP2+ M cell, pool2.CNhs13231.11846-124I112.06
GP2+ M cell, pool3.CNhs13240.11847-124I27.76
Ileum epithelium, pool1.CNhs13199.10252-104B96.27
Ileum epithelium, pool2.CNhs13232.10253-104C17.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I39.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8241.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1142.98
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3182.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9305.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2285.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4207.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D823.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D923.92
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.16
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.47
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C421.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.72
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I936.99
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A139.66
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C117.24
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E136.10
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C522.69
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.89
Mouse Meningeal cells, donor3.CNhs12109.11639-122D113.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D210.66
Mouse Microglia, donor1.CNhs12629.11718-123C88.39
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.40
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.70
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.07
Mouse Schwann, donor1.CNhs12507.11728-123D94.54
Mouse Schwann, donor2.CNhs12573.11746-123F915.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G352.18
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C413.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C814.57
Mouse hepatocyte, donor6.CNhs13090.11822-124F431.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F621.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.69
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.14
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.64
accessory axillary lymph node, adult.CNhs10475.1063-29H929.78
adrenal gland, adult.CNhs10508.49-24D744.24
adrenal gland, embryo E14.CNhs11038.406-44C527.76
adrenal gland, embryo E16.CNhs11004.1254-43D634.71
adrenal gland, embryo E17.CNhs11043.1263-45I125.60
adrenal gland, embryo E18.CNhs11026.1262-18F526.23
adrenal gland, neonate N00.CNhs11191.1311-23C132.45
adrenal gland, neonate N25.CNhs11223.1377-27I326.64
amnion, adult pregnant day17.5.CNhs10488.583-22A815.57
aorta, adult.CNhs10498.46-23H140.78
bone (os femoris), adult.CNhs10483.56-12G273.42
bone (os femoris), neonate N02.CNhs11227.1985-43F535.10
bone (os femoris), neonate N16.CNhs11225.1525-43A636.66
bone (os femoris), neonate N20.CNhs11195.1350-25C334.91
cecum, adult.CNhs10467.37-13H429.82
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I26.49
colon, adult.CNhs10468.36-18H725.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C714.14
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.93
corpora quadrigemina, adult.CNhs10501.16-22A46.14
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B27.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B159.07
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A243.67
epididymis, adult.CNhs10490.58-23B234.37
eyeball, adult.CNhs10484.31-12G48.63
eyeball, embryo E12.CNhs11016.345-16C619.26
eyeball, embryo E14.CNhs10521.399-16E218.85
eyeball, embryo E15.CNhs10593.426-16C925.03
eyeball, embryo E17.CNhs11023.1261-18D431.50
eyeball, neonate N00.CNhs11207.633-15C623.61
eyeball, neonate N01.CNhs11140.1532-43E722.80
eyeball, neonate N02.CNhs11205.1551-44G818.93
eyeball, neonate N16.CNhs11188.777-19A219.40
forelimb, embryo E11.CNhs10596.335-25E220.69
forelimb, embryo E12.CNhs10600.359-14H245.95
forelimb, embryo E13.CNhs10589.384-1E262.64
forelimb, embryo E14.CNhs10577.413-26A847.57
forelimb, embryo E15.CNhs11007.437-20E778.41
forelimb, embryo E17.CNhs10598.1517-43C457.46
forelimb, embryo E18.CNhs11008.1520-43B562.97
gonad, embryo E13.CNhs11044.1564-45I639.21
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.75
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.37
heart, embryo E11.CNhs10586.331-24E928.17
heart, embryo E12.CNhs11015.353-12F530.25
heart, embryo E13.CNhs11013.376-3I925.93
heart, embryo E14.CNhs10597.403-26D435.27
heart, embryo E15.CNhs11017.431-16C831.09
heart, embryo E16.CNhs11021.457-17C634.25
heart, embryo E17.CNhs11025.479-18E527.90
heart, embryo E18.CNhs11030.1283-20G333.27
heart, neonate N00.CNhs11213.639-21E326.97
heart, neonate N03.CNhs11221.1349-25I226.00
heart, neonate N10.CNhs11118.749-24G128.57
heart, neonate N16.CNhs11209.782-15G121.89
heart, neonate N20.CNhs11127.821-26I618.86
heart, neonate N25.CNhs11196.1351-25D322.17
heart, neonate N30.CNhs11202.1390-42D226.44
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G17.72
intestinal mucosa, adult.CNhs10506.860-29I334.36
intestine, adult.CNhs10496.178-9A319.30
intestine, embryo E12.CNhs11019.1251-16I532.21
intestine, embryo E13.CNhs11010.381-16D546.91
intestine, embryo E15.CNhs10602.976-16D844.33
intestine, embryo E16.CNhs10585.463-22H437.92
intestine, embryo E17.CNhs10582.482-18D335.58
intestine, embryo E18.CNhs10526.1289-20F733.86
intestine, neonate N00.CNhs11126.644-26D126.57
intestine, neonate N01.CNhs11192.1322-23E926.52
intestine, neonate N06.CNhs11102.688-20B832.42
intestine, neonate N07.CNhs11095.720-20F234.42
intestine, neonate N10.CNhs11098.755-23A537.04
intestine, neonate N20.CNhs11187.827-18D140.45
intestine, neonate N25.CNhs11121.1352-25E317.51
intestine, neonate N30.CNhs11131.1384-42G119.52
kidney, embryo E14.CNhs10606.411-4I918.02
kidney, embryo E15.CNhs10997.434-16F836.79
kidney, embryo E16.CNhs10584.464-22A534.94
kidney, embryo E17.CNhs11028.483-18I240.73
kidney, embryo E18.CNhs11001.1288-20C738.21
kidney, neonate N00.CNhs11214.646-21G730.79
kidney, neonate N10.CNhs11206.758-6D543.00
kidney, neonate N20.CNhs11113.832-19I124.50
kidney, neonate N25.CNhs11122.1353-25F325.28
kidney, neonate N30.CNhs11203.1385-42H118.63
liver, adult pregnant day01.CNhs10466.508-5B219.27
liver, embryo E12.CNhs10601.355-15F825.19
liver, embryo E13.CNhs10524.378-3H628.50
liver, embryo E14.CNhs10594.409-16E121.36
liver, embryo E15.CNhs10520.433-16D729.82
liver, embryo E16.CNhs10523.462-17F534.73
liver, embryo E17.CNhs10510.481-18A337.43
liver, embryo E18.CNhs10579.499-43G437.69
liver, neonate N00.CNhs11117.641-24F418.65
liver, neonate N03.CNhs11123.1345-25G224.44
liver, neonate N06.CNhs11101.684-20A835.94
liver, neonate N07.CNhs11103.716-20H234.98
liver, neonate N10.CNhs11115.751-24B939.32
liver, neonate N20.CNhs11220.823-25A333.85
liver, neonate N25.CNhs11198.1368-26H123.50
liver, neonate N30.CNhs11106.1382-42D124.60
lung, adult.CNhs10474.28-22B155.43
lung, embryo E12.CNhs10522.354-16G230.32
lung, embryo E14.CNhs10604.404-26F847.42
lung, embryo E15.CNhs11020.432-17C545.49
lung, embryo E16.CNhs10998.458-17B653.27
lung, embryo E17.CNhs10605.480-44A678.90
lung, embryo E18.CNhs10583.1287-20I686.89
lung, neonate N00.CNhs11224.640-42C675.13
lung, neonate N06.CNhs11212.683-20E574.56
lung, neonate N07.CNhs11111.715-19A367.55
lung, neonate N10.CNhs11219.750-23E663.14
lung, neonate N20.CNhs11109.822-18A457.52
lung, neonate N25.CNhs11119.1359-25C759.23
lung, neonate N30.CNhs11133.1394-42H260.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.42
mammary gland, adult lactating day02.CNhs10480.595-22B617.70
mammary gland, adult pregnant day19.CNhs10476.588-5H220.14
medulla oblongata, adult.CNhs10477.17-12C25.62
medulla oblongata, neonate N30.CNhs11200.1396-42A38.44
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.02
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.95
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.05
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.80
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.93
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.95
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.14
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I918.32
ovary, adult.CNhs10507.91-2I743.01
ovary, embryo E18.CNhs11040.505-44H741.49
ovary, neonate N00.CNhs11217.1299-22I448.87
oviduct, adult pregnant day01.CNhs10500.988-6G688.75
pancreas, adult.CNhs10486.34-16E443.81
pancreas, embryo E14.CNhs11012.405-44F433.50
pancreas, embryo E15.CNhs11042.1556-45F233.86
pancreas, embryo E16.CNhs11003.460-26E533.57
pancreas, embryo E17.CNhs10599.1558-45G332.19
pancreas, embryo E18.CNhs10580.1535-43I740.89
pancreas, neonate N00.CNhs11105.645-26G939.54
pancreas, neonate N01.CNhs11138.1531-43D749.08
pancreas, neonate N02.CNhs11139.1539-43D842.07
pancreas, neonate N16.CNhs11136.787-43B640.45
pancreas, neonate N25.CNhs11094.1555-45E242.17
pancreas, neonate N30.CNhs11182.1548-44H543.32
pituitary gland, adult.CNhs10493.21-1G811.92
pituitary gland, embryo E12.CNhs11018.346-16E626.47
pituitary gland, embryo E13.CNhs11009.370-44C727.42
pituitary gland, embryo E14.CNhs11037.398-44A528.94
pituitary gland, embryo E15.CNhs10592.427-16B930.15
pituitary gland, embryo E16.CNhs11036.449-43F631.93
pituitary gland, embryo E17.CNhs11039.1265-44F533.73
pituitary gland, neonate N00.CNhs11190.1308-22E919.79
placenta, adult pregnant day10.CNhs10472.539-13I715.96
placenta, adult pregnant day17.CNhs10464.577-18G38.47
prostate, adult.CNhs10470.859-1F89.26
skin, adult.CNhs10492.30-1C332.81
skin, neonate N00.CNhs11124.650-25G450.70
skin, neonate N03.CNhs11215.662-22H337.15
skin, neonate N06.CNhs11097.693-20I528.17
skin, neonate N10.CNhs11108.762-6C433.65
small intestine, neonate N16.CNhs11114.790-21I123.03
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G227.34
spleen, embryo E16.CNhs11035.461-43C146.64
spleen, embryo E18.CNhs11011.1271-21F232.78
spleen, neonate N10.CNhs11116.752-24D128.63
spleen, neonate N20.CNhs11112.824-19H123.92
spleen, neonate N25.CNhs11099.1354-25G324.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D316.31
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E335.43
stomach, embryo E15.CNhs10603.1252-16G870.96
stomach, embryo E16.CNhs11022.459-17D463.08
stomach, embryo E17.CNhs11006.1035-18D561.89
stomach, embryo E18.CNhs10999.1286-20C654.81
stomach, neonate N03.CNhs11193.1340-24B874.31
stomach, neonate N07.CNhs11210.718-18A972.32
stomach, neonate N25.CNhs11104.1355-25E443.97
stomach, neonate N30.CNhs11134.1386-42I133.18
submandibular gland, adult.CNhs10469.59-29C130.45
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F552.63
testis, embryo E15.CNhs11034.443-27C546.16
testis, embryo E16.CNhs11033.470-26G558.92
testis, embryo E17.CNhs11029.486-18I554.25
testis, embryo E18.CNhs11027.503-18G559.64
testis, neonate N00.CNhs11189.1300-22B758.44
testis, neonate N07.CNhs11222.726-26I452.21
testis, neonate N10.CNhs11204.763-44D933.45
testis, neonate N20.CNhs11110.839-18H313.53
testis, neonate N30.CNhs11130.1391-42E211.23
thymus, adult.CNhs10471.38-12B531.29
thymus, embryo E14.CNhs11041.402-44I434.06
thymus, embryo E15.CNhs11005.430-45I234.41
thymus, embryo E16.CNhs11002.456-26C534.69
thymus, embryo E17.CNhs10581.478-18C141.00
thymus, embryo E18.CNhs10595.1273-19G428.21
thymus, neonate N02.CNhs11181.1541-43F827.52
thymus, neonate N03.CNhs11137.2104-43C727.32
thymus, neonate N06.CNhs11197.681-26C426.55
thymus, neonate N07.CNhs11211.713-19D330.56
thymus, neonate N10.CNhs11194.748-24E428.63
thymus, neonate N20.CNhs11186.820-7A234.11
thymus, neonate N25.CNhs11125.1362-25G731.56
thymus, neonate N30.CNhs11132.1393-42G236.23
tongue, adult.CNhs10499.32-1B420.86
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H321.09
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.62
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G525.18
urinary bladder, adult.CNhs10481.879-12E467.42
uterus, adult pregnant day19.CNhs10497.590-15F569.25
uterus, adult.CNhs10509.92-27E574.18
vagina, adult.CNhs10502.89-27D542.44
vesicular gland, adult.CNhs10491.51-27F825.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I810.17
whole body, embryo E12.CNhs10587.857-27C944.29
whole body, embryo E13.CNhs10512.372-23H239.44
whole body, embryo E14.5.CNhs10578.420-27D238.17
whole body, embryo E14.CNhs10519.395-14B124.11
whole body, embryo E16.CNhs10514.453-14F222.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G543.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G545.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G542.36
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G538.16
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G540.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G544.14
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G538.58
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G540.85
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G539.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G540.01
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G540.56
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G537.04
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G541.21
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G545.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G547.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G545.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G538.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G539.82
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G537.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G539.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G542.07
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G544.98
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G538.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G542.65
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G545.79
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G543.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G537.24
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G538.58
whole body, embryo E17.5.CNhs10513.490-9F943.60
whole body, embryo E17.CNhs10517.475-3I533.22
whole body, embryo E18.CNhs10516.493-3B337.43
whole body, neonate N00.CNhs10525.657-19C237.39
whole body, neonate N01.CNhs10576.659-23C634.62
whole body, neonate N06.CNhs10515.692-21D126.69
whole body, neonate N10.CNhs10518.761-6B426.66





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk2.26e-0890
lung3.82e-0814
respiratory tube3.82e-0814
respiration organ3.82e-0814
pair of lungs3.82e-0814
lung primordium3.82e-0814
lung bud3.82e-0814
trunk region element7.17e-0879
primordium1.66e-07134
foregut1.96e-0780
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