FFCP PHASE1:Hg19::chrX:48326668..48326679,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:48326668..48326679,-
|short_description=p23@SLC38A5
|description=CAGE_peak_23_at_SLC38A5_5end
|association_with_transcript=18bp_to_ENST00000440085_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92745 | |EntrezGene=92745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18070 | |HGNC=18070 | ||
|TSSclassifier=strong | |||
|UniProt=C9JNK4 | |UniProt=C9JNK4 | ||
|association_with_transcript=18bp_to_ENST00000440085_5end | |||
|cluster_id=chrX:48326668..48326679,- | |||
|coexpression_cluster_id=C2189 | |||
|description=CAGE_peak_23_at_SLC38A5_5end | |||
|id=chrX:48326668..48326679,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000244;8.52e-11;4!CL:0000731;8.52e-11;4!CL:0000333;4.97e-09;5!CL:0002159;7.05e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.83e-12,72;CL:0000244,9.90e-11,4;CL:0000731,9.90e-11,4;CL:0000133,1.95e-07,59;CL:0002159,9.29e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;3.45e-11;1!DOID:3369;3.45e-11;1!DOID:3149;3.45e-11;1!DOID:171;1.36e-09;10!DOID:3093;3.37e-08;11!DOID:169;1.15e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,2.18e-11,1;DOID:3151,3.28e-11,1;DOID:3149,3.28e-11,1;DOID:171,1.11e-09,10;DOID:3093,3.09e-08,11;DOID:169,9.58e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001004!8.56e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.97e-09;5!UBERON:0002410;4.97e-09;5!UBERON:0000365;8.17e-09;5!UBERON:0000486;5.04e-08;12!UBERON:0005910;1.74e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,3.98e-09,5;UBERON:0002410,3.98e-09,5;UBERON:0000365,9.20e-09,5;UBERON:0005910,1.92e-07,6 | |||
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| ||
|short_description=p23@SLC38A5 | |||
}} | }} |
Latest revision as of 18:14, 15 September 2015
Short description: | p23@SLC38A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_SLC38A5_5end |
Coexpression cluster: | C2189_neuroblastoma_medulloblastoma_small_retinoblastoma_parietal_temporal_acute |
Association with transcript: | 18bp_to_ENST00000440085_5end |
EntrezGene: | SLC38A5 |
HGNC: | 18070 |
UniProt: | C9JNK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.83e-12 | 72 |
transitional epithelial cell | 9.90e-11 | 4 |
urothelial cell | 9.90e-11 | 4 |
neurectodermal cell | 1.95e-07 | 59 |
general ecto-epithelial cell | 9.29e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 3.98e-09 | 5 |
autonomic nervous system | 3.98e-09 | 5 |
urothelium | 9.20e-09 | 5 |
transitional epithelium | 1.92e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 2.18e-11 | 1 |
skin squamous cell carcinoma | 3.28e-11 | 1 |
keratoacanthoma | 3.28e-11 | 1 |
neuroectodermal tumor | 1.11e-09 | 10 |
nervous system cancer | 3.09e-08 | 11 |
neuroendocrine tumor | 9.58e-08 | 6 |