FFCP PHASE1:Mm9::chr19:6645146..6645151,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=74|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:6645146..6645151,+|id=chr19:6645146..6645151,+|ontology_enrichment_celltype=CL:0002250!1.95e-12!3;CL:0002563!1.32e-10!9;CL:0002251!1.32e-10!9|ontology_enrichment_celltype_v019_2=CL:0002250,3.41e-17,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.52e-15!15;UBERON:0000160!2.73e-15!43;UBERON:0000485!4.76e-12!11;UBERON:0003350!1.32e-10!9;UBERON:0004808!1.32e-10!9;UBERON:0001277!1.32e-10!9;UBERON:0005409!2.01e-10!59;UBERON:0001242!2.24e-10!13;UBERON:0000060!2.24e-10!13;UBERON:0001262!2.24e-10!13;UBERON:0004786!2.24e-10!13;UBERON:0004923!3.80e-09!24;UBERON:0001962!3.52e-08!2;UBERON:0001961!3.52e-08!2;UBERON:0001744!3.52e-08!2|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.69e-20,31;UBERON:0005409,3.25e-13,47;UBERON:0001242,2.69e-09,13;UBERON:0001262,2.69e-09,13;UBERON:0004786,2.69e-09,13;UBERON:0000344,3.82e-08,15;UBERON:0001155,1.76e-07,2;UBERON:0000059,1.76e-07,2|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,1.1554064790051,0.498703936075477,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5384264512871,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,2.69645822596266,0.432276099749388,2.78797782556114,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:6645146..6645151,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:6645146..6645151,+ | |||
|description=CAGE_peak_at_chr19:6645146..6645151,+ | |||
|id=chr19:6645146..6645151,+ | |||
|ontology_enrichment_celltype=CL:0002250!1.95e-12!3;CL:0002563!1.32e-10!9;CL:0002251!1.32e-10!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,3.41e-17,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.52e-15!15;UBERON:0000160!2.73e-15!43;UBERON:0000485!4.76e-12!11;UBERON:0003350!1.32e-10!9;UBERON:0004808!1.32e-10!9;UBERON:0001277!1.32e-10!9;UBERON:0005409!2.01e-10!59;UBERON:0001242!2.24e-10!13;UBERON:0000060!2.24e-10!13;UBERON:0001262!2.24e-10!13;UBERON:0004786!2.24e-10!13;UBERON:0004923!3.80e-09!24;UBERON:0001962!3.52e-08!2;UBERON:0001961!3.52e-08!2;UBERON:0001744!3.52e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.69e-20,31;UBERON:0005409,3.25e-13,47;UBERON:0001242,2.69e-09,13;UBERON:0001262,2.69e-09,13;UBERON:0004786,2.69e-09,13;UBERON:0000344,3.82e-08,15;UBERON:0001155,1.76e-07,2;UBERON:0000059,1.76e-07,2 | |||
|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,1.1554064790051,0.498703936075477,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5384264512871,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,2.69645822596266,0.432276099749388,2.78797782556114,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:6645146..6645151,+ | |||
}} |
Latest revision as of 12:39, 4 August 2015
Short description: | p@chr19:6645146..6645151, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6645146..6645151, + |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 3.41e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.69e-20 | 31 |
gastrointestinal system | 3.25e-13 | 47 |
intestinal mucosa | 2.69e-09 | 13 |
wall of intestine | 2.69e-09 | 13 |
gastrointestinal system mucosa | 2.69e-09 | 13 |
mucosa | 3.82e-08 | 15 |
colon | 1.76e-07 | 2 |
large intestine | 1.76e-07 | 2 |