FFCP PHASE1:Hg19::chr6:143999190..143999201,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9749 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20956 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENST00000397980_5end | |||
|cluster_id=chr6:143999190..143999201,+ | |||
|description=CAGE_peak_6_at_PHACTR2_5end | |||
|id=chr6:143999190..143999201,+ | |||
|ontology_enrichment_celltype=CL:0002139!6.46e-09!24;CL:0002334!2.67e-07!12;CL:0000222!7.06e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.57e-14;12!CL:0002579;4.25e-12;3!CL:0002615;5.67e-12;3!CL:0002580;7.03e-12;3!CL:0000136;9.22e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.59e-14,12;CL:0002579,4.29e-12,3;CL:0002615,6.37e-12,3;CL:0002580,7.09e-12,3;CL:0000057,7.64e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.21e-15!79;UBERON:0007798!3.21e-15!79;UBERON:0000055!2.64e-13!69;UBERON:0004872!7.58e-13!84;UBERON:0004535!1.03e-12!110;UBERON:0001009!1.26e-12!113;UBERON:0001981!8.19e-11!60;UBERON:0007500!8.19e-11!60;UBERON:0004537!8.19e-11!60;UBERON:0006965!8.19e-11!60;UBERON:0003914!1.37e-08!118;UBERON:0001637!1.14e-07!42;UBERON:0003509!1.14e-07!42;UBERON:0004572!1.14e-07!42;UBERON:0003688!4.01e-07!6;UBERON:0002358!4.01e-07!6;UBERON:0003684!4.01e-07!6;UBERON:0001178!4.01e-07!6;UBERON:0000477!8.61e-07!286;UBERON:0000468!9.53e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.51e-22;6!UBERON:0002358;2.51e-22;6!UBERON:0003684;2.51e-22;6!UBERON:0001178;2.51e-22;6!UBERON:0004457;1.26e-14;9!UBERON:0000042;1.26e-14;9!UBERON:0000310;7.20e-09;10!UBERON:0005406;4.21e-08;2!UBERON:0001443;5.01e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.84e-22,6;UBERON:0002358,2.84e-22,6;UBERON:0003684,2.84e-22,6;UBERON:0001178,2.84e-22,6;UBERON:0004457,9.59e-11,12;UBERON:0000042,9.59e-11,12;UBERON:0000310,6.84e-09,10;UBERON:0005406,2.72e-08,2;UBERON:0001443,4.78e-08,11 | |||
|phase1_expression=3.63356758541113,0.214100523890983,4.79244973926302,4.00293193412522,3.12872766099101,1.74467704820074,0,0,0,0,0,0.436882744260345,0,0,1.32558950291166,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619412741790207,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.398927315243264,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.53435074212236,0.722878304769133,0.50133791063589,0.289693037921647,0,0,0.189069634328136,0.443458794925128,0.263504357079378,0.0654895377488563,0,0.741568885568859,0,0,0.132957960518865,0,0,0,0.596287222100115,0,0,1.69592382577203,0.838998872419812,1.10047216776027,0.835979866147242,1.8089173141853,3.91342888955381,1.67360306382335,0.805658634218294,0,0.24406205754817,1.47065232138347,0,0.267899184852239,0.673588117878509,0.788280363383256,0,0.949265659568129,0.366403487860815,0,0,0,5.4666914686485,0.759783069987479,2.25095607382472,0,0.709336764396714,2.80338800071154,1.06748995729705,0,0.622422070799533,0.269421344139376,0.490385709340376,0.756787138224657,1.15235184896,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0.358779271377724,0,0,0,0,0.257640540045629,0.37223371266318,1.18143432568886,1.16924406193438,1.00973509697646,0.276149695926898,0,0,0.302256294682921,0.339121184620975,0.193260853163297,0.545492241181669,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0.821860859650752,0.577465791044295,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0.708875486211932,0.0895585227028483,0.290633938513962,0,3.94130590316755,0.088048434013226,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0.448524337381443,0.43596006883328,0.2933531432838,0.775630294546667,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,1.64648067356154,0,0,2.37585561880029,0,0,0.299918973546171,0,0,0,0.718874566474748,0,0,1.30303176000821,0.410952645100767,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0.271265023699736,0.415941723061614,1.78428988797162,0.946214490203608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96972492510043,4.14347327877769,3.08726103876381,6.02254001501795,3.58195074346692,13.1900215337758,8.90508398669946,0.154209693802656,0.177561725313127,0.164254312027618,0,0.232420756919918,0.241718899183244,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.850468526382578,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0.325378394664303,1.75169719801128,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0.576570202095319,0.382838137483752,0,0,0.62962469366128,0.6970372701606,0.308033580176089,1.06461206063404,0,0.55597265731176,1.5743737541619,0.744316738719335,0,0.38126038784765,0,0,0,0,1.97859703341646,0,0.117812402345686,1.01091240786658,0,0.421258456238981,0,0.487426979262569,0,0,0.282810863907425,0,0,0.66343897524122,0.876901770507525,0,0,0.202910376962704,0.30982349809975,1.12678241012897,0.430234056612155,0.687743287091848,0.35667105148125,0.354761064070598,0.844430541190656,0,0,0.699869440489966,0.0962221127255121,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.197286811273867,0,3.33410970433911,0,0.0927680981618513,0,0.260427761085233,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.307801034015188,0.113942055847001,0,0.718061155278177,0.217294743844016,0,0.366390373607449,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,1.30586246527318,0.282706142867882,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.31593289814244,0.300646838828985,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,0.0870592065804026,0.17472666824203,0.51595809741485,0,0,0.0821154570532092,0.290967049465258,1.412098027064,0.677942222341597,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,2.1964690054889,0,0,0.201550417460179,3.24269895188163,0,0.236349546921671,0.494495150286999,0.13480708770837,0,0,0,0.136203406111576,0.643012593860077,1.51293380256957,0.415440338029185,0,0,0.0607495566580247,0,0.0788057072991982,0.367182116944987,0,0,0.191915197319445,1.42939065274673,0,0,0.542999601753713,0,0,0,0.082092520749339,0.170388021785422,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,0,0.943225830597996,0.414239055347196,0,0.197611631897944,0,0,0.544017803369474,0,0,0,0,0,0.366078794705889,0.1251909307065,0.573409195690071,0.554645257684261,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,1.18284119991707,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0,0.214821114084977,0,0.398095888698616,0.400027764663154,0.343395705182793,0.336749488765919,1.26184898228651,0,0.857766365499703,0,0,0,0,0.179088841081487,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.918736432059601,0.0642292250964595,0,0,0,0,0,0,0,0.785181748008205,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,2.92717821536708,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0.840816489941367,0,0,0,0.500335809236594,0,0,0.173858272302579,2.40513409419076,0.207216164163037,0.3414369541879,0,0,0,0,0,1.14553434272025,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0.874238242015829,0,0,0,0.196308467114945,0,0,1.52934403219035,0.187967835959707,0.193373663920732,0,0,0,0,2.19100916473955,0,0.143339583151451,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0.713921808193872,0.801652215796681,0.0918948995348449,1.75495277504663,0.0757786982182394,0.535928260312357,0,0.20686599172379,0.639701945702943,0,0,0,0,0.318235791390825,0.202117188958219,0.653150243690884,0.342233301085281,0.336760265072938,0,0.332660356546013,0,0.106727345877715,0,0,2.34640942403454,0.366724332548599,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p6@PHACTR2 | |||
}} |
Latest revision as of 20:38, 15 September 2015
Short description: | p6@PHACTR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PHACTR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000397980_5end |
EntrezGene: | PHACTR2 |
HGNC: | 20956 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.59e-14 | 12 |
omentum preadipocyte | 4.29e-12 | 3 |
adipocyte of omentum tissue | 6.37e-12 | 3 |
preadipocyte of the breast | 7.09e-12 | 3 |
fibroblast | 7.64e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.84e-22 | 6 |
peritoneum | 2.84e-22 | 6 |
abdominal cavity | 2.84e-22 | 6 |
visceral peritoneum | 2.84e-22 | 6 |
cavity lining | 9.59e-11 | 12 |
serous membrane | 9.59e-11 | 12 |
breast | 6.84e-09 | 10 |
perirenal fat | 2.72e-08 | 2 |
chest | 4.78e-08 | 11 |