FFCP PHASE1:Hg19::chr6:75886595..75886610,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:75886595..75886610,- | |||
|coexpression_cluster_id=C1280 | |||
|description=CAGE_peak_at_chr6:75886595..75886610,- | |||
|id=chr6:75886595..75886610,- | |||
|ontology_enrichment_celltype=CL:0000057!6.80e-14!75;CL:0000055!5.87e-13!180;CL:0002620!2.43e-12!23;CL:0002334!8.17e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.44e-29;23!CL:0002334;8.22e-21;12!CL:0002580;5.21e-17;3!CL:0002579;3.06e-16;3!CL:0002617;1.18e-11;2!CL:0000057;7.54e-10;73!CL:0000138;3.07e-08;6!CL:0002615;1.07e-07;3!CL:0000135;1.86e-07;3!CL:0000388;1.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.97e-29,23;CL:0000057,1.50e-27,76;CL:0002334,1.14e-20,12;CL:0002580,5.52e-17,3;CL:0002579,6.63e-16,3;CL:0000136,9.53e-12,15;CL:0002617,9.57e-12,2;CL:0000134,7.51e-09,354;CL:0002320,1.51e-08,361;CL:0000058,2.55e-08,6;CL:0000138,2.55e-08,6;CL:0002615,1.02e-07,3;CL:0000135,1.63e-07,3;CL:0000388,1.63e-07,3;CL:0000219,1.78e-07,386;CL:0000048,7.95e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.33e-07!5;DOID:450!1.33e-07!5;DOID:66!1.33e-07!5;DOID:423!1.33e-07!5;DOID:0080000!1.33e-07!5;DOID:11722!1.33e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;2.74e-24;5!DOID:450;2.74e-24;5!DOID:66;2.74e-24;5!DOID:423;2.74e-24;5!DOID:0080000;2.74e-24;5!DOID:11722;2.74e-24;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.45e-24,5;DOID:450,3.45e-24,5;DOID:66,3.45e-24,5;DOID:423,3.45e-24,5;DOID:0080000,3.45e-24,5;DOID:11722,3.45e-24,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.17e-11!95;UBERON:0002097!2.27e-09!40;UBERON:0003688!4.97e-09!6;UBERON:0002358!4.97e-09!6;UBERON:0003684!4.97e-09!6;UBERON:0001178!4.97e-09!6;UBERON:0002199!1.23e-07!45;UBERON:0002416!1.23e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.64e-21;6!UBERON:0002358;2.64e-21;6!UBERON:0003684;2.64e-21;6!UBERON:0001178;2.64e-21;6!UBERON:0004457;3.92e-14;9!UBERON:0000042;3.92e-14;9!UBERON:0000310;2.54e-13;10!UBERON:0002097;2.57e-12;41!UBERON:0001443;4.40e-12;11!UBERON:0002199;3.56e-10;46!UBERON:0002416;3.56e-10;46!UBERON:0007846;1.86e-07;3!UBERON:0000043;1.86e-07;3!UBERON:0007845;1.86e-07;3!UBERON:0003102;4.48e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.68e-21,6;UBERON:0002358,4.68e-21,6;UBERON:0003684,4.68e-21,6;UBERON:0001178,4.68e-21,6;UBERON:0002097,2.00e-15,41;UBERON:0002199,1.75e-13,46;UBERON:0002416,1.75e-13,46;UBERON:0000310,2.37e-13,10;UBERON:0001443,4.12e-12,11;UBERON:0004457,2.04e-10,12;UBERON:0000042,2.04e-10,12;UBERON:0002384,5.85e-09,371;UBERON:0007846,1.63e-07,3;UBERON:0000043,1.63e-07,3;UBERON:0007845,1.63e-07,3;UBERON:0003102,4.94e-07,99 | |||
|phase1_expression=2.72517568905835,3.8538094300377,1.83240725324762,2.00146596706261,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,2.1686349143074,0,2.462390822334,0,1.94653948121054,0.0945348171640679,0.443458794925128,0.702678285545008,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0.336672227908132,0.375355559615893,0.554128230968366,1.31693286264251,0.30648779579902,0,0,1.4351170855109,1.2813443329114,1.90738711043606,1.50045548042201,1.23663035086127,7.47157566132325,2.04728541964749,2.53164498361899,1.94874010322397,3.78650661366172,2.20919756741518,0.484938170456436,2.84007674013291,0.604512589365842,0.508681776931463,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0.831883446123229,1.24900292158013,1.57702415033935,0.702848489956279,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,3.47350930946288,9.51464234385987,5.3325417942284,1.02511319404561,2.04682899626681,7.23842645146234,2.96836132889982,0,0,0.164254312027618,0,0,0,0.200506470303285,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.330037999682352,0,0.650060246036521,0,0,0.308097234229289,0.15350367472613,0.275673144969061,0.644521469209642,0.145016693914229,0.340906509664404,0.178064071293475,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0.823611089208164,0.353437207037059,0,0,0,0,0.487426979262569,0,0.136499911407986,1.27264888758341,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0.392996164052485,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.614321404198464,0,0,0.556543525114529,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.230850775511391,0.341826167541004,0,0.179515288819544,0,0,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0.0979923974143777,0.0870592065804026,0.34945333648406,0.171986032471617,0.290268993867255,0.219267951258557,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77987976358325,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0.378806010550178,1.25783950876288,0,0.228840068396924,0,0.310874401165561,0,0,0,0,0,0.265841714557995,1.5652351854352,0.150257608997218,0,0,0,0.107410557042488,0,0.796191777397232,0.400027764663154,1.71697852591396,1.34699795506368,0,0,0,0,0,0,0,0.71635536432595,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0.655219697692825,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0.245148321753905,0,0,0,0,1.18948980281472,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,1.85997509083376,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,1.61693751166575,0.435433495793923,0.342233301085281,0,0,0,0.325613074443898,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr6:75886595..75886610,- | |||
}} |
Latest revision as of 03:14, 31 July 2015
Short description: | p@chr6:75886595..75886610, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:75886595..75886610, - |
Coexpression cluster: | C1280_Preadipocyte_Fibroblast_Adipocyte_leiomyoblastoma_Ewing_Chondrocyte_spindle |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.97e-29 | 23 |
fibroblast | 1.50e-27 | 76 |
preadipocyte | 1.14e-20 | 12 |
preadipocyte of the breast | 5.52e-17 | 3 |
omentum preadipocyte | 6.63e-16 | 3 |
fat cell | 9.53e-12 | 15 |
adipocyte of breast | 9.57e-12 | 2 |
mesenchymal cell | 7.51e-09 | 354 |
connective tissue cell | 1.51e-08 | 361 |
chondroblast | 2.55e-08 | 6 |
chondrocyte | 2.55e-08 | 6 |
adipocyte of omentum tissue | 1.02e-07 | 3 |
fibrocyte | 1.63e-07 | 3 |
tendon cell | 1.63e-07 | 3 |
motile cell | 1.78e-07 | 386 |
multi fate stem cell | 7.95e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.68e-21 | 6 |
peritoneum | 4.68e-21 | 6 |
abdominal cavity | 4.68e-21 | 6 |
visceral peritoneum | 4.68e-21 | 6 |
skin of body | 2.00e-15 | 41 |
integument | 1.75e-13 | 46 |
integumental system | 1.75e-13 | 46 |
breast | 2.37e-13 | 10 |
chest | 4.12e-12 | 11 |
cavity lining | 2.04e-10 | 12 |
serous membrane | 2.04e-10 | 12 |
connective tissue | 5.85e-09 | 371 |
dense regular connective tissue | 1.63e-07 | 3 |
tendon | 1.63e-07 | 3 |
regular connective tissue | 1.63e-07 | 3 |
surface structure | 4.94e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.45e-24 | 5 |
myotonic disease | 3.45e-24 | 5 |
muscle tissue disease | 3.45e-24 | 5 |
myopathy | 3.45e-24 | 5 |
muscular disease | 3.45e-24 | 5 |
myotonic dystrophy | 3.45e-24 | 5 |