FFCP PHASE1:Hg19::chr7:121090011..121090047,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:121090011..121090047,+ | |||
|coexpression_cluster_id=C2454 | |||
|description=CAGE_peak_at_chr7:121090011..121090047,+ | |||
|id=chr7:121090011..121090047,+ | |||
|ontology_enrichment_celltype=CL:1000306!8.60e-20!4;CL:0002547!8.60e-20!4;CL:0002579!2.30e-16!3;CL:0000569!6.85e-12!4;CL:0000011!6.85e-12!4;CL:0002334!1.92e-10!12;CL:0000136!3.02e-08!15;CL:0002580!1.75e-07!3;CL:0002494!2.37e-07!16;CL:0000057!4.77e-07!75;CL:0000048!6.39e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002579;1.49e-38;3!CL:0002615;8.57e-11;3!CL:0002334;1.85e-10;12!CL:0000569;1.82e-08;4!CL:1000306;2.43e-08;4!CL:0002547;2.43e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,1.23e-38,3;CL:0002615,8.17e-11,3;CL:0002334,1.77e-10,12;CL:0000569,1.82e-08,4;CL:0000011,1.82e-08,4;CL:1000306,2.43e-08,4;CL:0002547,2.43e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000011;1.82e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;1.54e-29;1!DOID:3451;1.66e-15;2!DOID:4159;1.66e-15;2!DOID:0060122;1.66e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.78e-29,1;DOID:3451,1.78e-15,2;DOID:4159,1.78e-15,2;DOID:0060122,1.78e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0000415!8.60e-20!4;UBERON:0007240!8.60e-20!4;UBERON:0005742!8.60e-20!4;UBERON:0005734!8.60e-20!4;UBERON:0004664!8.60e-20!4;UBERON:0004663!8.60e-20!4;UBERON:0003688!2.89e-14!6;UBERON:0002358!2.89e-14!6;UBERON:0003684!2.89e-14!6;UBERON:0001178!2.89e-14!6;UBERON:0001013!8.61e-09!14;UBERON:0000947!5.26e-08!21;UBERON:0010191!5.26e-08!21;UBERON:0004457!3.76e-07!12;UBERON:0000042!3.76e-07!12;UBERON:0002384!9.91e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.03e-43;6!UBERON:0002358;6.03e-43;6!UBERON:0003684;6.03e-43;6!UBERON:0001178;6.03e-43;6!UBERON:0004457;5.91e-29;9!UBERON:0000042;5.91e-29;9!UBERON:0000014;2.03e-08;4!UBERON:0004797;2.43e-08;4!UBERON:0000415;2.43e-08;4!UBERON:0007240;2.43e-08;4!UBERON:0005742;2.43e-08;4!UBERON:0005734;2.43e-08;4!UBERON:0004664;2.43e-08;4!UBERON:0004663;2.43e-08;4!UBERON:0004923;1.11e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.86e-43,6;UBERON:0002358,4.86e-43,6;UBERON:0003684,4.86e-43,6;UBERON:0001178,4.86e-43,6;UBERON:0004457,5.48e-22,12;UBERON:0000042,5.48e-22,12;UBERON:0000014,2.11e-08,4;UBERON:0000415,2.43e-08,4;UBERON:0007240,2.43e-08,4;UBERON:0005742,2.43e-08,4;UBERON:0005734,2.43e-08,4;UBERON:0004664,2.43e-08,4;UBERON:0004663,2.43e-08,4;UBERON:0004923,2.37e-07,66 | |||
|phase1_expression=0.363356758541113,0,2.39622486963151,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,1.43418310374407,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992431231275107,0.153461973288062,0,11.9169408807802,0.511707249066704,1.60853921143608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39453664789186,0.94443704049192,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467426619694449,0.554805861502613,0.189403005275089,0,0,8.00940239389232,0.604923695052956,0.15543720058278,0,0,0.449803112163605,0,0.414706207840855,0,0.521745061811734,0,0,0,0,0,0,0.796191777397232,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:121090011..121090047,+ | |||
}} |
Latest revision as of 05:30, 31 July 2015
Short description: | p@chr7:121090011..121090047, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:121090011..121090047, + |
Coexpression cluster: | C2454_Preadipocyte_Adipocyte_mesenchymal_Fibroblast_Ewing_Sertoli_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 1.23e-38 | 3 |
adipocyte of omentum tissue | 8.17e-11 | 3 |
preadipocyte | 1.77e-10 | 12 |
cardiac mesenchymal cell | 1.82e-08 | 4 |
migratory trunk neural crest cell | 1.82e-08 | 4 |
fibroblast of tunica adventitia of artery | 2.43e-08 | 4 |
fibroblast of the aortic adventitia | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.86e-43 | 6 |
peritoneum | 4.86e-43 | 6 |
abdominal cavity | 4.86e-43 | 6 |
visceral peritoneum | 4.86e-43 | 6 |
cavity lining | 5.48e-22 | 12 |
serous membrane | 5.48e-22 | 12 |
zone of skin | 2.11e-08 | 4 |
artery wall | 2.43e-08 | 4 |
tunica adventitia of artery | 2.43e-08 | 4 |
adventitia | 2.43e-08 | 4 |
tunica adventitia of blood vessel | 2.43e-08 | 4 |
aorta tunica adventitia | 2.43e-08 | 4 |
aorta wall | 2.43e-08 | 4 |
organ component layer | 2.37e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.78e-29 | 1 |
skin carcinoma | 1.78e-15 | 2 |
skin cancer | 1.78e-15 | 2 |
integumentary system cancer | 1.78e-15 | 2 |