FFCP PHASE1:Mm9::chr2:72314053..72314057,+: Difference between revisions
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{{FFCP|EntrezGene=66953|HGNC=|MCL_coexpression_id=105|UniProt=Q9D0M2|association_with_transcript=-158bp_to_ENSMUST00000102691_5end|description=CAGE_peak_5_at_Cdca7_5end|id=chr2:72314053..72314057,+|ontology_enrichment_celltype=CL:0002250!7.25e-08!3|ontology_enrichment_celltype_v019_2=CL:0002250,7.35e-53,3;CL:0002608,6.68e-24,3;CL:0002563,2.63e-18,9;CL:0002251,2.63e-18,9;CL:0002609,1.61e-12,6;CL:0002076,2.49e-11,15;CL:0000223,1.08e-08,20;CL:0000066,4.23e-07,25;CL:0002321,8.13e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!3.05e-08!23;UBERON:0000974!3.05e-08!23;UBERON:0004807!3.05e-08!23;UBERON:0005058!3.05e-08!23;UBERON:0003351!3.05e-08!23;UBERON:0009113!3.05e-08!23;UBERON:0003295!3.05e-08!23;UBERON:0009722!3.05e-08!23;UBERON:0005562!3.05e-08!23;UBERON:0007690!3.05e-08!23;UBERON:0006562!8.43e-08!24;UBERON:0003408!8.43e-08!24;UBERON:0001557!8.43e-08!24;UBERON:0001042!8.43e-08!24;UBERON:0008814!8.43e-08!24;UBERON:0009145!8.43e-08!24;UBERON:0000064!9.52e-08!99;UBERON:0000331!8.54e-07!3;UBERON:0002116!8.54e-07!3;UBERON:0001204!8.54e-07!3;UBERON:0001168!8.54e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.63e-18,9;UBERON:0004808,2.63e-18,9;UBERON:0001277,2.63e-18,9;UBERON:0000485,3.83e-15,11;UBERON:0001242,6.03e-13,13;UBERON:0001262,6.03e-13,13;UBERON:0004786,6.03e-13,13;UBERON:0000344,2.49e-11,15;UBERON:0001954,7.02e-11,7;UBERON:0003022,7.02e-11,7;UBERON:0002421,7.02e-11,7;UBERON:0000349,7.02e-11,7;UBERON:0002600,7.02e-11,7;UBERON:0004923,2.29e-07,24|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,3.17736781726402,2.82598897109437,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,2.44981598429908,2.87536413054709,0,0,0,0,0.263772575460388,0.274462930807229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0.376963056338593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0.949058123089023,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0,0,0.205421914329655,0.389762468933385,0.716106782669926,0.198681354781265,0,0.147689527174577,0.201932899896295,0.304827226619999,0.201652370273681,0.0974578807397524,0.384847366561318,0.233753804363138,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p5@Cdca7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66953 | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D0M2 | |||
|association_with_transcript=-158bp_to_ENSMUST00000102691_5end | |||
|cluster_id=chr2:72314053..72314057,+ | |||
|description=CAGE_peak_5_at_Cdca7_5end | |||
|id=chr2:72314053..72314057,+ | |||
|ontology_enrichment_celltype=CL:0002250!7.25e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,7.35e-53,3;CL:0002608,6.68e-24,3;CL:0002563,2.63e-18,9;CL:0002251,2.63e-18,9;CL:0002609,1.61e-12,6;CL:0002076,2.49e-11,15;CL:0000223,1.08e-08,20;CL:0000066,4.23e-07,25;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.05e-08!23;UBERON:0000974!3.05e-08!23;UBERON:0004807!3.05e-08!23;UBERON:0005058!3.05e-08!23;UBERON:0003351!3.05e-08!23;UBERON:0009113!3.05e-08!23;UBERON:0003295!3.05e-08!23;UBERON:0009722!3.05e-08!23;UBERON:0005562!3.05e-08!23;UBERON:0007690!3.05e-08!23;UBERON:0006562!8.43e-08!24;UBERON:0003408!8.43e-08!24;UBERON:0001557!8.43e-08!24;UBERON:0001042!8.43e-08!24;UBERON:0008814!8.43e-08!24;UBERON:0009145!8.43e-08!24;UBERON:0000064!9.52e-08!99;UBERON:0000331!8.54e-07!3;UBERON:0002116!8.54e-07!3;UBERON:0001204!8.54e-07!3;UBERON:0001168!8.54e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.63e-18,9;UBERON:0004808,2.63e-18,9;UBERON:0001277,2.63e-18,9;UBERON:0000485,3.83e-15,11;UBERON:0001242,6.03e-13,13;UBERON:0001262,6.03e-13,13;UBERON:0004786,6.03e-13,13;UBERON:0000344,2.49e-11,15;UBERON:0001954,7.02e-11,7;UBERON:0003022,7.02e-11,7;UBERON:0002421,7.02e-11,7;UBERON:0000349,7.02e-11,7;UBERON:0002600,7.02e-11,7;UBERON:0004923,2.29e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,3.17736781726402,2.82598897109437,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,2.44981598429908,2.87536413054709,0,0,0,0,0.263772575460388,0.274462930807229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0.376963056338593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0.949058123089023,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0,0,0.205421914329655,0.389762468933385,0.716106782669926,0.198681354781265,0,0.147689527174577,0.201932899896295,0.304827226619999,0.201652370273681,0.0974578807397524,0.384847366561318,0.233753804363138,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Cdca7 | |||
}} |
Latest revision as of 22:47, 26 September 2015
Short description: | p5@Cdca7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cdca7_5end |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | -158bp_to_ENSMUST00000102691_5end |
EntrezGene: | Cdca7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 7.35e-53 | 3 |
hippocampal neuron | 6.68e-24 | 3 |
intestinal epithelial cell | 2.63e-18 | 9 |
epithelial cell of alimentary canal | 2.63e-18 | 9 |
neuron of cerebral cortex | 1.61e-12 | 6 |
endo-epithelial cell | 2.49e-11 | 15 |
endodermal cell | 1.08e-08 | 20 |
epithelial cell | 4.23e-07 | 25 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.63e-18 | 9 |
gastrointestinal system epithelium | 2.63e-18 | 9 |
intestinal epithelium | 2.63e-18 | 9 |
simple columnar epithelium | 3.83e-15 | 11 |
intestinal mucosa | 6.03e-13 | 13 |
wall of intestine | 6.03e-13 | 13 |
gastrointestinal system mucosa | 6.03e-13 | 13 |
mucosa | 2.49e-11 | 15 |
Ammon's horn | 7.02e-11 | 7 |
lobe parts of cerebral cortex | 7.02e-11 | 7 |
hippocampal formation | 7.02e-11 | 7 |
limbic system | 7.02e-11 | 7 |
limbic lobe | 7.02e-11 | 7 |
organ component layer | 2.29e-07 | 24 |