FFCP PHASE1:Hg19::chr7:27219833..27219845,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3206 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5100 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=30bp_to_uc003syw.3_5end | |||
|cluster_id=chr7:27219833..27219845,- | |||
|description=CAGE_peak_7_at_HOXA10_5end | |||
|id=chr7:27219833..27219845,- | |||
|ontology_enrichment_celltype=CL:1000497!1.39e-29!18;CL:0002518!1.39e-29!18;CL:1000449!1.15e-24!16;CL:1000507!1.43e-23!12;CL:1000494!1.43e-23!12;CL:0002681!3.67e-17!13;CL:0002584!3.67e-17!13;CL:0000239!9.15e-10!3;CL:1000615!9.15e-10!3;CL:0002306!9.15e-10!3;CL:0000066!1.69e-09!254;CL:1000612!4.98e-07!7;CL:1000746!4.98e-07!7;CL:0000244!7.35e-07!4;CL:0000731!7.35e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:1000507;9.72e-79;10!CL:1000494;9.72e-79;10!CL:1000497;7.46e-77;17!CL:0002518;7.46e-77;17!CL:1000449;1.69e-74;15!CL:0002681;3.00e-52;12!CL:0002584;3.00e-52;12!CL:0000239;1.31e-24;3!CL:1000615;1.31e-24;3!CL:0002306;1.31e-24;3!CL:1000746;1.77e-18;7!CL:1000612;1.77e-18;7!CL:0000650;1.99e-17;2!CL:1000500;1.99e-17;2!CL:1000618;1.99e-17;2!CL:1001318;1.99e-17;2!CL:0002173;1.99e-17;2!CL:0000669;3.61e-09;4!CL:0002188;3.91e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.14e-78,10;CL:1000494,1.14e-78,10;CL:1000497,8.45e-77,17;CL:0002518,8.45e-77,17;CL:1000449,2.20e-74,15;CL:0002681,4.05e-52,12;CL:0002584,4.05e-52,12;CL:0000239,1.21e-24,3;CL:1000615,1.21e-24,3;CL:0002306,1.21e-24,3;CL:1000746,1.99e-18,7;CL:1000612,1.99e-18,7;CL:0000650,2.07e-17,2;CL:1000500,2.07e-17,2;CL:1000618,2.07e-17,2;CL:1001318,2.07e-17,2;CL:0002173,2.07e-17,2;CL:0000066,1.80e-10,253;CL:0000669,3.68e-09,4;CL:0002188,4.16e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.42e-07;10!UBERON:0007687;1.42e-07;10 | |||
|ontology_enrichment_disease=DOID:305!9.02e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!2.09e-40!44;UBERON:0001008!2.49e-39!45;UBERON:0002113!1.57e-34!27;UBERON:0003918!1.57e-34!27;UBERON:0005095!1.57e-34!27;UBERON:0007687!1.57e-34!27;UBERON:0000489!2.86e-28!32;UBERON:0006555!9.45e-27!17;UBERON:0005103!9.45e-27!17;UBERON:0000083!9.45e-27!17;UBERON:0009201!9.45e-27!17;UBERON:0004819!9.45e-27!17;UBERON:0006553!9.45e-27!17;UBERON:0003074!9.45e-27!17;UBERON:0003060!9.45e-27!17;UBERON:0000080!4.53e-25!18;UBERON:0002120!4.53e-25!18;UBERON:0004875!4.53e-25!18;UBERON:0005721!4.53e-25!18;UBERON:0005754!4.53e-25!18;UBERON:0007297!4.53e-25!18;UBERON:0004211!1.15e-24!16;UBERON:0001285!1.15e-24!16;UBERON:0007684!1.15e-24!16;UBERON:0003220!1.15e-24!16;UBERON:0004208!1.15e-24!16;UBERON:0009773!1.43e-23!12;UBERON:0001231!1.43e-23!12;UBERON:0004810!1.43e-23!12;UBERON:0004876!3.24e-22!20;UBERON:0003887!5.40e-21!21;UBERON:0003064!1.25e-20!37;UBERON:0000058!6.52e-19!26;UBERON:0005172!9.15e-18!55;UBERON:0005173!9.15e-18!55;UBERON:0001225!3.67e-17!13;UBERON:0008987!3.67e-17!13;UBERON:0002417!1.90e-15!61;UBERON:0000916!1.90e-15!61;UBERON:0001737!4.08e-14!9;UBERON:0003104!1.35e-13!238;UBERON:0009142!1.35e-13!238;UBERON:0001851!1.43e-13!16;UBERON:0000353!1.17e-12!17;UBERON:0000059!4.45e-11!11;UBERON:0003103!2.53e-10!69;UBERON:0001155!3.07e-10!9;UBERON:0006853!9.15e-10!3;UBERON:0007685!9.15e-10!3;UBERON:0004134!9.15e-10!3;UBERON:0005177!4.80e-09!107;UBERON:0000481!5.99e-08!347;UBERON:0003886!1.13e-07!63;UBERON:0001046!1.29e-07!19;UBERON:0009569!1.80e-07!113;UBERON:0004921!2.63e-07!129;UBERON:0004185!2.63e-07!129;UBERON:0000074!4.98e-07!7;UBERON:0001229!4.98e-07!7;UBERON:0001230!4.98e-07!7;UBERON:0005749!4.98e-07!7;UBERON:0004199!4.98e-07!7;UBERON:0004209!4.98e-07!7;UBERON:0004198!4.98e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;9.72e-79;10!UBERON:0009773;9.72e-79;10!UBERON:0001231;9.72e-79;10!UBERON:0004810;9.72e-79;10!UBERON:0006555;1.69e-74;15!UBERON:0004819;1.69e-74;15!UBERON:0001285;1.69e-74;15!UBERON:0007684;1.69e-74;15!UBERON:0002113;1.25e-71;24!UBERON:0011143;1.25e-71;24!UBERON:0006554;1.26e-64;30!UBERON:0001008;1.26e-64;30!UBERON:0000489;7.52e-59;29!UBERON:0001225;3.00e-52;12!UBERON:0008987;3.00e-52;12!UBERON:0001851;1.44e-41;15!UBERON:0000353;1.44e-41;15!UBERON:0006853;1.31e-24;3!UBERON:0007685;1.31e-24;3!UBERON:0004134;1.31e-24;3!UBERON:0005172;1.44e-24;52!UBERON:0005173;1.44e-24;52!UBERON:0002417;5.72e-19;58!UBERON:0000916;5.72e-19;58!UBERON:0000074;1.77e-18;7!UBERON:0001229;1.77e-18;7!UBERON:0003567;1.99e-17;2!UBERON:0003838;1.99e-17;2!UBERON:0003586;1.99e-17;2!UBERON:0005169;1.99e-17;2!UBERON:0002321;1.99e-17;2!UBERON:0005215;1.99e-17;2!UBERON:0002303;1.99e-17;2!UBERON:0002319;1.99e-17;2!UBERON:0003103;2.23e-13;61!UBERON:0005177;3.00e-09;99!UBERON:0003891;3.61e-09;4!UBERON:0003914;3.41e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.14e-78,10;UBERON:0004211,2.20e-74,15;UBERON:0009773,2.20e-74,15;UBERON:0001231,2.20e-74,15;UBERON:0001285,2.20e-74,15;UBERON:0007684,2.20e-74,15;UBERON:0004208,2.20e-74,15;UBERON:0006555,1.28e-69,16;UBERON:0004819,1.28e-69,16;UBERON:0002113,6.57e-66,26;UBERON:0003918,6.57e-66,26;UBERON:0011143,6.57e-66,26;UBERON:0005095,6.57e-66,26;UBERON:0007687,6.57e-66,26;UBERON:0000489,7.13e-55,31;UBERON:0001225,4.05e-52,12;UBERON:0008987,4.05e-52,12;UBERON:0001851,1.83e-41,15;UBERON:0000353,1.83e-41,15;UBERON:0006554,2.87e-40,47;UBERON:0001008,2.26e-39,48;UBERON:0005172,8.38e-35,54;UBERON:0005173,8.38e-35,54;UBERON:0002417,4.81e-31,60;UBERON:0000916,4.81e-31,60;UBERON:0006853,1.21e-24,3;UBERON:0007685,1.21e-24,3;UBERON:0004134,1.21e-24,3;UBERON:0003103,1.33e-23,68;UBERON:0010532,1.99e-18,7;UBERON:0000074,1.99e-18,7;UBERON:0001229,1.99e-18,7;UBERON:0001230,1.99e-18,7;UBERON:0003220,1.99e-18,7;UBERON:0005749,1.99e-18,7;UBERON:0004199,1.99e-18,7;UBERON:0004209,1.99e-18,7;UBERON:0004198,1.99e-18,7;UBERON:0003567,2.07e-17,2;UBERON:0003838,2.07e-17,2;UBERON:0003586,2.07e-17,2;UBERON:0005169,2.07e-17,2;UBERON:0002321,2.07e-17,2;UBERON:0005215,2.07e-17,2;UBERON:0002303,2.07e-17,2;UBERON:0002319,2.07e-17,2;UBERON:0005177,2.73e-17,101;UBERON:0005103,3.72e-16,8;UBERON:0000083,3.72e-16,8;UBERON:0009201,3.72e-16,8;UBERON:0006553,3.72e-16,8;UBERON:0003074,3.72e-16,8;UBERON:0003060,3.72e-16,8;UBERON:0009569,2.61e-15,112;UBERON:0000080,2.19e-14,9;UBERON:0002120,2.19e-14,9;UBERON:0004875,2.19e-14,9;UBERON:0005721,2.19e-14,9;UBERON:0005754,2.19e-14,9;UBERON:0007297,2.19e-14,9;UBERON:0004876,8.29e-12,11;UBERON:0003887,7.72e-11,12;UBERON:0003104,7.54e-10,160;UBERON:0009142,7.54e-10,160;UBERON:0003914,2.98e-09,117;UBERON:0003891,3.68e-09,4;UBERON:0002100,2.37e-07,199;UBERON:0000058,6.78e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0.482022059766964,0.441175890929576,0.653638332277218,0,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.725156697549733,0.200506470303285,0,0,0.182091168006717,0,4.06079651616671,3.00359814707218,5.49044838423799,8.76835347919564,4.3276167846079,0,0,1.51141141271498,3.08454505380579,5.41892875087706,6.02027728625824,4.07802036872061,3.3243040357149,5.59686886805446,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,1.72202149068492,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8541513436767,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0.276283915531148,12.0927718970052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06021705293358,0.141353071433941,0,2.98578579323551,0.353830258013357,2.4441205797345,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.450970258243478,1.55532287095871,0,0,0,0,6.54601955868523,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,7.06043044055119,0,6.00582492516876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52766414967844,0,0,0,0,0,0,0,0,0,0,0.394028536495991,3.72427575758487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0.470958557103084,0,0.280272163313789,0,0.863710364874486,3.8220135030964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p7@HOXA10 | |||
}} |
Latest revision as of 02:03, 18 September 2015
Short description: | p7@HOXA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HOXA10_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_uc003syw.3_5end |
EntrezGene: | HOXA10 |
HGNC: | 5100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.14e-78 | 10 |
nephron tubule epithelial cell | 1.14e-78 | 10 |
kidney cell | 8.45e-77 | 17 |
kidney epithelial cell | 8.45e-77 | 17 |
epithelial cell of nephron | 2.20e-74 | 15 |
kidney cortical cell | 4.05e-52 | 12 |
renal cortical epithelial cell | 4.05e-52 | 12 |
brush border epithelial cell | 1.21e-24 | 3 |
kidney cortex tubule cell | 1.21e-24 | 3 |
epithelial cell of proximal tubule | 1.21e-24 | 3 |
glomerular cell | 1.99e-18 | 7 |
kidney corpuscule cell | 1.99e-18 | 7 |
mesangial cell | 2.07e-17 | 2 |
kidney interstitial cell | 2.07e-17 | 2 |
juxtaglomerular complex cell | 2.07e-17 | 2 |
renal interstitial pericyte | 2.07e-17 | 2 |
extraglomerular mesangial cell | 2.07e-17 | 2 |
epithelial cell | 1.80e-10 | 253 |
pericyte cell | 3.68e-09 | 4 |
glomerular endothelial cell | 4.16e-07 | 5 |