FFCP PHASE1:Mm9::chr3:98697132..98697168,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=56185|HGNC=|MCL_coexpression_id=104|UniProt=Q9NYQ2,A2AEP9|association_with_transcript=0bp_to_ENSMUST00000029464,NM_019545,uc008qqj.2_5end|description=CAGE_peak_1_at_Hao2_5end|id=chr3:98697132..98697168,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!1.70e-15!49;UBERON:0005173!1.70e-15!49;UBERON:0002417!1.70e-15!49;UBERON:0000916!1.70e-15!49;UBERON:0009854!6.31e-13!23;UBERON:0009856!6.31e-13!23;UBERON:0002107!4.40e-12!22;UBERON:0007499!4.40e-12!22;UBERON:0006925!4.40e-12!22;UBERON:0009497!4.40e-12!22;UBERON:0000015!4.40e-12!22;UBERON:0002423!4.40e-12!22;UBERON:0006235!4.40e-12!22;UBERON:0008835!4.40e-12!22;UBERON:0003894!4.40e-12!22;UBERON:0004161!4.40e-12!22;UBERON:0008836!4.40e-12!22;UBERON:0002365!1.52e-09!25;UBERON:0002330!1.52e-09!25;UBERON:0009569!3.54e-09!66;UBERON:0005409!9.61e-08!59;UBERON:0000160!1.34e-07!43;UBERON:0005177!1.50e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0005172,9.98e-16,49;UBERON:0005173,9.98e-16,49;UBERON:0002417,9.98e-16,49;UBERON:0000916,9.98e-16,49;UBERON:0009854,9.77e-14,23;UBERON:0009856,9.77e-14,23;UBERON:0002107,8.86e-13,22;UBERON:0007499,8.86e-13,22;UBERON:0006925,8.86e-13,22;UBERON:0009497,8.86e-13,22;UBERON:0000015,8.86e-13,22;UBERON:0002423,8.86e-13,22;UBERON:0006235,8.86e-13,22;UBERON:0008835,8.86e-13,22;UBERON:0003894,8.86e-13,22;UBERON:0004161,8.86e-13,22;UBERON:0008836,8.86e-13,22;UBERON:0002365,2.43e-10,25;UBERON:0002330,2.43e-10,25;UBERON:0003104,4.71e-10,61;UBERON:0009142,4.71e-10,61;UBERON:0009569,7.30e-09,66;UBERON:0005177,1.07e-08,79;UBERON:0005256,9.76e-07,45|phase1_expression=0,0,0.909998478779072,0.30246421130683,0.500895729946347,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,104.348117015363,0,0,2.87986361028132,3.44113921600755,0,1.29228598847722,0.646413698057667,30.5937705324762,4.78857246543868,0.443461021310609,0,0,0,0.288851619751275,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,2.6087803983151,7.74381489283248,14.2793980078628,8.09554787456726,8.4470934268197,0.896053774194671,159.54486126967,0,0,0,0,0,0,0,0,0,0,168.992141984209,0,18.7037095221679,3.46970653532272,11.2652226975492,12.6838523490832,16.8809357418937,8.93674174231356,11.0586600370114,34.1129055473436,0,0,0,0,0,1509.77326586679,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0,0,0,2.10986744970001,0,0,0,0,0,0,0,0,0,0,0,1.59227413454795,0,0,0,0,0,0,0,0,0,0,0,0,0.329119699826961,0,0,0,0,0,0,0,0,0,0.853153002140936,0.696710015581316,18.6857818917035,81.0767768985837,112.30091214166,152.751177768385,1.89811624617805,78.2320034939052,93.4966976737003,116.787449088156,104.500750695848,1.79763881730844,217.002602074193,154.334486772135,4.1726938209678,18.7367560679955,60.8621772634634,90.0138869076289,155.355942221268,154.649482858152,166.628275322418,495.970097211463,866.004982773023,887.965991581277,54.8437360111225,1.00107063429656,4.32429789249047,6.97072548393047,21.3003127457928,48.4766091102358,139.789592627999,141.546499625799,29.0222055927313,237.221060994502,241.530586965956,308.876986564858,504.564917426244,379.878632432456,155.71695493702,65.1298753840546,0,0,0,0.169745085775188,0,0,1.19021820443007,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,17.7425106510336,3.5613120733451,0.81443479676788,0,0,1.69946445308487,1.51161778482376,0.377210159511796,1.47650946440386,1.84461088766356,6.97756391554197,3.27180356529755,2.13898427030833,0,0,0,0,0,0,0,0,0,0,0,0,2.1183207086382,0,0,0,0,0,1.47726809770555,11.9507143018239,0,0,0.619160603889667,0,0,0,0.228778173206523,0,0,0,0,0,1.21991680276109,9.50446999231851,2.29997125615916,5.67742665740062,8.4964538222437,29.1766698710436,0.523511883968059,927.395133902778,0,2.25477175473676,0.448549638131936,0.992750942742586,0.583353565032143,1.29159823477731,2.02747350588934,1.17357238645754,5.07797100891405,1.57289016638566,0.483168241652012,0.864090018773596,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,3.00291960721891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,5.59145449257076,9.85181864351517,25.1865606576519,25.5583736971858,20.1914356094116,31.7710017495897,22.2373546352142,34.7266640849628,23.3896663318734,22.0993957628923,20.6801242267728,19.4131885069973,13.8125170472091,15.0649623728312,17.5547390621972,23.0768104449852,20.019053138278,30.1724942099166,21.8295241575985,17.6442780561018,23.6914659110695,20.4217355501267,21.7459542281609,22.3172126904783,21.0455769150274,20.3706170768793,25.812544496256,16.9648075917569,17.9278157923526,19.2338590289754,20.7615367189194,22.9558867067558,0,25.2646137121041,18.2640395941054,0.956441660344217,3.08827986767322,1.39120701372253|short_description=p1@Hao2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56185 | |||
|HGNC= | |||
|MCL_coexpression_id=104 | |||
|TSSclassifier=NA | |||
|UniProt=Q9NYQ2,A2AEP9 | |||
|association_with_transcript=0bp_to_ENSMUST00000029464,NM_019545,uc008qqj.2_5end | |||
|cluster_id=chr3:98697132..98697168,- | |||
|description=CAGE_peak_1_at_Hao2_5end | |||
|id=chr3:98697132..98697168,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.70e-15!49;UBERON:0005173!1.70e-15!49;UBERON:0002417!1.70e-15!49;UBERON:0000916!1.70e-15!49;UBERON:0009854!6.31e-13!23;UBERON:0009856!6.31e-13!23;UBERON:0002107!4.40e-12!22;UBERON:0007499!4.40e-12!22;UBERON:0006925!4.40e-12!22;UBERON:0009497!4.40e-12!22;UBERON:0000015!4.40e-12!22;UBERON:0002423!4.40e-12!22;UBERON:0006235!4.40e-12!22;UBERON:0008835!4.40e-12!22;UBERON:0003894!4.40e-12!22;UBERON:0004161!4.40e-12!22;UBERON:0008836!4.40e-12!22;UBERON:0002365!1.52e-09!25;UBERON:0002330!1.52e-09!25;UBERON:0009569!3.54e-09!66;UBERON:0005409!9.61e-08!59;UBERON:0000160!1.34e-07!43;UBERON:0005177!1.50e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,9.98e-16,49;UBERON:0005173,9.98e-16,49;UBERON:0002417,9.98e-16,49;UBERON:0000916,9.98e-16,49;UBERON:0009854,9.77e-14,23;UBERON:0009856,9.77e-14,23;UBERON:0002107,8.86e-13,22;UBERON:0007499,8.86e-13,22;UBERON:0006925,8.86e-13,22;UBERON:0009497,8.86e-13,22;UBERON:0000015,8.86e-13,22;UBERON:0002423,8.86e-13,22;UBERON:0006235,8.86e-13,22;UBERON:0008835,8.86e-13,22;UBERON:0003894,8.86e-13,22;UBERON:0004161,8.86e-13,22;UBERON:0008836,8.86e-13,22;UBERON:0002365,2.43e-10,25;UBERON:0002330,2.43e-10,25;UBERON:0003104,4.71e-10,61;UBERON:0009142,4.71e-10,61;UBERON:0009569,7.30e-09,66;UBERON:0005177,1.07e-08,79;UBERON:0005256,9.76e-07,45 | |||
|phase1_expression=0,0,0.909998478779072,0.30246421130683,0.500895729946347,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,104.348117015363,0,0,2.87986361028132,3.44113921600755,0,1.29228598847722,0.646413698057667,30.5937705324762,4.78857246543868,0.443461021310609,0,0,0,0.288851619751275,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,2.6087803983151,7.74381489283248,14.2793980078628,8.09554787456726,8.4470934268197,0.896053774194671,159.54486126967,0,0,0,0,0,0,0,0,0,0,168.992141984209,0,18.7037095221679,3.46970653532272,11.2652226975492,12.6838523490832,16.8809357418937,8.93674174231356,11.0586600370114,34.1129055473436,0,0,0,0,0,1509.77326586679,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0,0,0,2.10986744970001,0,0,0,0,0,0,0,0,0,0,0,1.59227413454795,0,0,0,0,0,0,0,0,0,0,0,0,0.329119699826961,0,0,0,0,0,0,0,0,0,0.853153002140936,0.696710015581316,18.6857818917035,81.0767768985837,112.30091214166,152.751177768385,1.89811624617805,78.2320034939052,93.4966976737003,116.787449088156,104.500750695848,1.79763881730844,217.002602074193,154.334486772135,4.1726938209678,18.7367560679955,60.8621772634634,90.0138869076289,155.355942221268,154.649482858152,166.628275322418,495.970097211463,866.004982773023,887.965991581277,54.8437360111225,1.00107063429656,4.32429789249047,6.97072548393047,21.3003127457928,48.4766091102358,139.789592627999,141.546499625799,29.0222055927313,237.221060994502,241.530586965956,308.876986564858,504.564917426244,379.878632432456,155.71695493702,65.1298753840546,0,0,0,0.169745085775188,0,0,1.19021820443007,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,17.7425106510336,3.5613120733451,0.81443479676788,0,0,1.69946445308487,1.51161778482376,0.377210159511796,1.47650946440386,1.84461088766356,6.97756391554197,3.27180356529755,2.13898427030833,0,0,0,0,0,0,0,0,0,0,0,0,2.1183207086382,0,0,0,0,0,1.47726809770555,11.9507143018239,0,0,0.619160603889667,0,0,0,0.228778173206523,0,0,0,0,0,1.21991680276109,9.50446999231851,2.29997125615916,5.67742665740062,8.4964538222437,29.1766698710436,0.523511883968059,927.395133902778,0,2.25477175473676,0.448549638131936,0.992750942742586,0.583353565032143,1.29159823477731,2.02747350588934,1.17357238645754,5.07797100891405,1.57289016638566,0.483168241652012,0.864090018773596,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,3.00291960721891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,5.59145449257076,9.85181864351517,25.1865606576519,25.5583736971858,20.1914356094116,31.7710017495897,22.2373546352142,34.7266640849628,23.3896663318734,22.0993957628923,20.6801242267728,19.4131885069973,13.8125170472091,15.0649623728312,17.5547390621972,23.0768104449852,20.019053138278,30.1724942099166,21.8295241575985,17.6442780561018,23.6914659110695,20.4217355501267,21.7459542281609,22.3172126904783,21.0455769150274,20.3706170768793,25.812544496256,16.9648075917569,17.9278157923526,19.2338590289754,20.7615367189194,22.9558867067558,0,25.2646137121041,18.2640395941054,0.956441660344217,3.08827986767322,1.39120701372253 | |||
|short_description=p1@Hao2 | |||
}} |
Latest revision as of 01:19, 26 September 2015
Short description: | p1@Hao2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hao2_5end |
Coexpression cluster: | MCL_coexpression_mm9:104 |
Association with transcript: | 0bp_to_ENSMUST00000029464, NM_019545, uc008qqj.2_5end |
EntrezGene: | Hao2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 9.98e-16 | 49 |
abdominal segment element | 9.98e-16 | 49 |
abdominal segment of trunk | 9.98e-16 | 49 |
abdomen | 9.98e-16 | 49 |
digestive tract diverticulum | 9.77e-14 | 23 |
sac | 9.77e-14 | 23 |
liver | 8.86e-13 | 22 |
epithelial sac | 8.86e-13 | 22 |
digestive gland | 8.86e-13 | 22 |
epithelium of foregut-midgut junction | 8.86e-13 | 22 |
anatomical boundary | 8.86e-13 | 22 |
hepatobiliary system | 8.86e-13 | 22 |
foregut-midgut junction | 8.86e-13 | 22 |
hepatic diverticulum | 8.86e-13 | 22 |
liver primordium | 8.86e-13 | 22 |
septum transversum | 8.86e-13 | 22 |
liver bud | 8.86e-13 | 22 |
exocrine gland | 2.43e-10 | 25 |
exocrine system | 2.43e-10 | 25 |
mesenchyme | 4.71e-10 | 61 |
entire embryonic mesenchyme | 4.71e-10 | 61 |
subdivision of trunk | 7.30e-09 | 66 |
trunk region element | 1.07e-08 | 79 |
trunk mesenchyme | 9.76e-07 | 45 |