FFCP PHASE1:Mm9::chr5:17080241..17080257,+: Difference between revisions
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{{FFCP|EntrezGene=20348|HGNC=|MCL_coexpression_id=628|UniProt=Q62181|association_with_transcript=142bp_to_ENSMUST00000030568_5end|description=CAGE_peak_8_at_Sema3c_5end|id=chr5:17080241..17080257,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000464!1.29e-09!57;UBERON:0005156!2.97e-09!26;UBERON:0000990!2.97e-09!26;UBERON:0000489!2.59e-08!21;UBERON:0003133!4.79e-08!24;UBERON:0001008!1.12e-07!17;UBERON:0006554!3.78e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0005156,2.16e-11,26;UBERON:0000990,2.16e-11,26;UBERON:0003133,6.37e-09,24;UBERON:0001008,5.89e-08,19;UBERON:0000474,1.62e-07,9;UBERON:0004175,2.06e-07,9;UBERON:0006554,6.43e-07,18;UBERON:0005153,8.93e-07,17|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,2.12891555560981,0.183546752161682,0,0.218025156380447,0.439372365468944,1.36100929351998,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0.622137673850866,0.540023753326763,0.210324961351382,0.856952953211411,0.883474163806454,0.244981598429908,0.287536413054709,0,0,0.255374676170375,0.307213066512487,0,0.365950574409639,0.52091337055676,0,1.12552522006336,0.15279824777681,0.883885756421003,0.284743361598206,0.745597783301202,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.865964164044856,1.26679932737549,0.505524445014783,0.5709193985953,0,0,0,0.608930956624282,0.461230994512117,0,0.587943535678524,0.125666591329675,0,0.722996784599558,0,0.485300549842228,0,0,0,0,0.209446706813455,0,0,0,0,0.898743836428936,0,0.376963056338593,0.347648640384553,1.02286182932132,0.62336413367868,0.324482526135515,3.86989582631202,0.870848794270651,2.0217820674694,0.210441855886474,0.260240885925407,0.229902104433473,0.540186389416048,0.90422890701429,0.408218994907967,0.768682321709099,0.655912071918102,0.517406741478031,0.215567992932842,0.378212160335639,0.527853372491847,0.219195732427575,0.556094498451196,0,1.02891068203972,0.398068533636986,0,0,0,0.621377317606506,0.703578179943289,0,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0.329119699826961,0.164167464079095,0.243206428637567,0.292399974850665,0,0.268412837520744,0.630869845692382,7.71784592844633,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.951128130562796,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,1.16978452271472,0,1.08069024937347,0.199141273254367,0.948339504765408,1.48523066392647,1.1270773567308,1.4255592949172,1.74557238450863,0.701358198903186,0.948548056863859,0.295220295959204,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,12.9327233116623,0.37898282354097,0.325929952884052,0.339490171550376,0,0.167506257441816,0,0.780534591431195,5.83250033192907,4.4292937929755,7.81328366421687,21.6299575424774,19.858772914578,18.5150794984335,0,0,0.491764273019036,0.827810238914197,0.481651769963376,0.468846746368813,0,0.252470927204373,0.631016438832513,0,0.215423397732799,0,0,0,0,0.292255857911312,0,1.92792789853084,3.40656204499845,0.534196811001766,1.79175655288934,7.9185659026817,1.32745138339963,0,0.302323556964751,0.377210159511796,0,0.614870295887855,1.03371317267288,0.727067458955011,0.712994756769443,0,0,1.03135543248187,0,0.18006109403131,0,0,0.354680467284547,0.356737635204141,0.493647061806363,0,0,0.42366414172764,1.54369878638473,0.49465875882444,1.29171541356724,0.542816324353403,0.596861720015682,0.656563598980245,0.582961673259701,1.48340241608408,0,0.412773735926445,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.209088296014469,0.655087691238533,0.944050424693745,0.743881101528023,0.523511883968059,0.259229946583586,1.24267862617385,0,0.448549638131936,0.496375471371293,0.777804753376191,1.16243841129958,1.18269287843545,0.704143431874524,1.8228613878153,2.30690557736564,0.966336483304024,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63655025677257,4.50437941082837,5.67770035228522,1.2862102744744,2.00628841614145,0.564751842617067,0.460325236507177,0.572895513439397,0.859265911718438,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.367687016900028,1.11123363900808,0.412070114477788,0.320919209591815,1.26348605881899,0.760437899670719,0.377252682772152,0.561849044819294,0.768301828858431,0.459483751644906,1.42888107384922,0.347652977834566,1.15745532278223,1.23625770240992,0.883193520806384,0,0.354951612318675,0.238436189947321,0.145346416632329,0.564656282491984,0.930760686808441,0.365855945745545,0.526139422875686,0.407412341537585,1.12228454331548,0.237270036248348,0.689531376628944,0.409231043169689,0.929621047115796,0.385813221962283,0.999242311751784,1.40358965067245,0.644613162144895,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p8@Sema3c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20348 | |||
|HGNC= | |||
|MCL_coexpression_id=628 | |||
|TSSclassifier=NA | |||
|UniProt=Q62181 | |||
|association_with_transcript=142bp_to_ENSMUST00000030568_5end | |||
|cluster_id=chr5:17080241..17080257,+ | |||
|description=CAGE_peak_8_at_Sema3c_5end | |||
|id=chr5:17080241..17080257,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!1.29e-09!57;UBERON:0005156!2.97e-09!26;UBERON:0000990!2.97e-09!26;UBERON:0000489!2.59e-08!21;UBERON:0003133!4.79e-08!24;UBERON:0001008!1.12e-07!17;UBERON:0006554!3.78e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,2.16e-11,26;UBERON:0000990,2.16e-11,26;UBERON:0003133,6.37e-09,24;UBERON:0001008,5.89e-08,19;UBERON:0000474,1.62e-07,9;UBERON:0004175,2.06e-07,9;UBERON:0006554,6.43e-07,18;UBERON:0005153,8.93e-07,17 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,2.12891555560981,0.183546752161682,0,0.218025156380447,0.439372365468944,1.36100929351998,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0.622137673850866,0.540023753326763,0.210324961351382,0.856952953211411,0.883474163806454,0.244981598429908,0.287536413054709,0,0,0.255374676170375,0.307213066512487,0,0.365950574409639,0.52091337055676,0,1.12552522006336,0.15279824777681,0.883885756421003,0.284743361598206,0.745597783301202,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.865964164044856,1.26679932737549,0.505524445014783,0.5709193985953,0,0,0,0.608930956624282,0.461230994512117,0,0.587943535678524,0.125666591329675,0,0.722996784599558,0,0.485300549842228,0,0,0,0,0.209446706813455,0,0,0,0,0.898743836428936,0,0.376963056338593,0.347648640384553,1.02286182932132,0.62336413367868,0.324482526135515,3.86989582631202,0.870848794270651,2.0217820674694,0.210441855886474,0.260240885925407,0.229902104433473,0.540186389416048,0.90422890701429,0.408218994907967,0.768682321709099,0.655912071918102,0.517406741478031,0.215567992932842,0.378212160335639,0.527853372491847,0.219195732427575,0.556094498451196,0,1.02891068203972,0.398068533636986,0,0,0,0.621377317606506,0.703578179943289,0,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0.329119699826961,0.164167464079095,0.243206428637567,0.292399974850665,0,0.268412837520744,0.630869845692382,7.71784592844633,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.951128130562796,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,1.16978452271472,0,1.08069024937347,0.199141273254367,0.948339504765408,1.48523066392647,1.1270773567308,1.4255592949172,1.74557238450863,0.701358198903186,0.948548056863859,0.295220295959204,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,12.9327233116623,0.37898282354097,0.325929952884052,0.339490171550376,0,0.167506257441816,0,0.780534591431195,5.83250033192907,4.4292937929755,7.81328366421687,21.6299575424774,19.858772914578,18.5150794984335,0,0,0.491764273019036,0.827810238914197,0.481651769963376,0.468846746368813,0,0.252470927204373,0.631016438832513,0,0.215423397732799,0,0,0,0,0.292255857911312,0,1.92792789853084,3.40656204499845,0.534196811001766,1.79175655288934,7.9185659026817,1.32745138339963,0,0.302323556964751,0.377210159511796,0,0.614870295887855,1.03371317267288,0.727067458955011,0.712994756769443,0,0,1.03135543248187,0,0.18006109403131,0,0,0.354680467284547,0.356737635204141,0.493647061806363,0,0,0.42366414172764,1.54369878638473,0.49465875882444,1.29171541356724,0.542816324353403,0.596861720015682,0.656563598980245,0.582961673259701,1.48340241608408,0,0.412773735926445,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.209088296014469,0.655087691238533,0.944050424693745,0.743881101528023,0.523511883968059,0.259229946583586,1.24267862617385,0,0.448549638131936,0.496375471371293,0.777804753376191,1.16243841129958,1.18269287843545,0.704143431874524,1.8228613878153,2.30690557736564,0.966336483304024,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63655025677257,4.50437941082837,5.67770035228522,1.2862102744744,2.00628841614145,0.564751842617067,0.460325236507177,0.572895513439397,0.859265911718438,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.367687016900028,1.11123363900808,0.412070114477788,0.320919209591815,1.26348605881899,0.760437899670719,0.377252682772152,0.561849044819294,0.768301828858431,0.459483751644906,1.42888107384922,0.347652977834566,1.15745532278223,1.23625770240992,0.883193520806384,0,0.354951612318675,0.238436189947321,0.145346416632329,0.564656282491984,0.930760686808441,0.365855945745545,0.526139422875686,0.407412341537585,1.12228454331548,0.237270036248348,0.689531376628944,0.409231043169689,0.929621047115796,0.385813221962283,0.999242311751784,1.40358965067245,0.644613162144895,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p8@Sema3c | |||
}} |
Latest revision as of 19:25, 25 September 2015
Short description: | p8@Sema3c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Sema3c_5end |
Coexpression cluster: | MCL_coexpression_mm9:628 |
Association with transcript: | 142bp_to_ENSMUST00000030568_5end |
EntrezGene: | Sema3c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive structure | 2.16e-11 | 26 |
reproductive system | 2.16e-11 | 26 |
reproductive organ | 6.37e-09 | 24 |
renal system | 5.89e-08 | 19 |
female reproductive system | 1.62e-07 | 9 |
internal genitalia | 2.06e-07 | 9 |
urinary system structure | 6.43e-07 | 18 |
epithelial bud | 8.93e-07 | 17 |