FFCP PHASE1:Mm9::chr6:142705487..142705494,+: Difference between revisions
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{{FFCP|EntrezGene=12764|HGNC=|UniProt=|association_with_transcript=203bp_to_ENSMUST00000144920_5end|description=CAGE_peak_7_at_Cmas_5end|id=chr6:142705487..142705494,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,3.35e-08,3;CL:0002006,3.35e-08,3;CL:0002024,3.35e-08,3;CL:0002614,5.43e-08,3;CL:0000068,1.02e-07,3;CL:0002202,1.02e-07,3;CL:0000069,1.02e-07,3;CL:0002632,1.02e-07,3;CL:0002368,1.02e-07,3;CL:0000307,1.02e-07,3;CL:0000377,1.02e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002038,5.43e-08,3;UBERON:0009663,5.43e-08,3;UBERON:0009661,5.43e-08,3;UBERON:0000125,5.43e-08,3;UBERON:0002308,5.43e-08,3;UBERON:0003126,1.02e-07,3;UBERON:0001005,1.02e-07,3;UBERON:0007196,1.02e-07,3;UBERON:0001558,1.02e-07,3|phase1_expression=0.160148847104794,0,0,0.60492842261366,0.500895729946347,0.33575854382378,0.467225281191051,0,0.281577444303333,0,0,0,0.171200729931206,0.0874204024189974,0.666219523631325,1.61980213911861,3.49780939064073,0.157731082679119,0.137114433605739,0,0.255129870453209,0.397163804803541,0,0.319984845586813,0.45881856213434,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0.418531630736908,0,0,0,0,0,0.503587271902309,0.101376931219515,0.183546752161682,0,0,0,0.58328969722285,0.139986421625363,0,0.335565212115473,0,1.00828139742739,0,0.286533439938757,0.515672092277442,0.404632921719196,0,0.633831403506179,0,0,0.899899717281399,0.988866362566974,0,0,0,0.518448061542388,0.945041568321835,0.420649922702764,0.571301968807607,0.441737081903227,0.244981598429908,0.383381884072945,0,2.20231761998777,0.383062014255563,0.614426133024974,0.131886287730194,1.73826522844578,0,2.79182999001381,0,1.22238598221448,0,0.569486723196412,0.186399445825301,0,0,0,0,0.679971333707751,0,1.29955283489534,0.896053774194671,0,0,0.519572009205738,0,0,0,0,0,0.432982082022428,1.01343946190039,1.51657333504435,0.5709193985953,0,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0.494389935468748,0,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0.41889341362691,0.255457055208591,0.11981512450592,0.599902730993408,0.127070227073065,0.149790639404823,0,0,0.173824320192276,0,0.41557608911912,0.162241263067758,0,0.124406970610093,0,0,0.260240885925407,0.229902104433473,0,0,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0.284163499395593,0,0,0,0.473489471170421,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0.201683524623343,0.667134131534611,0,0,0.658795818896044,0,0.795825888164603,0,0.898819408654221,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0,0.296452627087149,0.166845105716094,0.393117990226406,0,0.405720242777006,0.482354319504834,0,0.575392274901621,3.89124544260085,0,1.43768206527355,1.48856379067401,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0,0.160550589987792,0.117211686592203,0.163934945376675,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.445597348164788,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0,0.18006109403131,0,0.428674070063185,0.177340233642274,0.356737635204141,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0.370850604021019,0.512612642393558,0,0.185194527369712,0.188368457004691,3.8274383761887,0.228778173206523,0.339956859987711,0,0.138199973804424,0,0,0.203319467126849,0,0.209088296014469,0,0,0.0826534557253359,0.523511883968059,0.259229946583586,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0.209718688851422,0,0,0,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0.120195449519969,0,0.201932899896295,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0.0897138566094757,0.335769232728157,0,0.187682475451182,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,1.03552062350364,0.207574695168353,0,0.341467211508268,0,0,0,0,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.233931608445408,1.07435527024149,0,0.661774257358546,0|short_description=p7@Cmas}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12764 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=203bp_to_ENSMUST00000144920_5end | |||
|cluster_id=chr6:142705487..142705494,+ | |||
|description=CAGE_peak_7_at_Cmas_5end | |||
|id=chr6:142705487..142705494,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,3.35e-08,3;CL:0002006,3.35e-08,3;CL:0002024,3.35e-08,3;CL:0002614,5.43e-08,3;CL:0000068,1.02e-07,3;CL:0002202,1.02e-07,3;CL:0000069,1.02e-07,3;CL:0002632,1.02e-07,3;CL:0002368,1.02e-07,3;CL:0000307,1.02e-07,3;CL:0000377,1.02e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,5.43e-08,3;UBERON:0009663,5.43e-08,3;UBERON:0009661,5.43e-08,3;UBERON:0000125,5.43e-08,3;UBERON:0002308,5.43e-08,3;UBERON:0003126,1.02e-07,3;UBERON:0001005,1.02e-07,3;UBERON:0007196,1.02e-07,3;UBERON:0001558,1.02e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0.60492842261366,0.500895729946347,0.33575854382378,0.467225281191051,0,0.281577444303333,0,0,0,0.171200729931206,0.0874204024189974,0.666219523631325,1.61980213911861,3.49780939064073,0.157731082679119,0.137114433605739,0,0.255129870453209,0.397163804803541,0,0.319984845586813,0.45881856213434,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0.418531630736908,0,0,0,0,0,0.503587271902309,0.101376931219515,0.183546752161682,0,0,0,0.58328969722285,0.139986421625363,0,0.335565212115473,0,1.00828139742739,0,0.286533439938757,0.515672092277442,0.404632921719196,0,0.633831403506179,0,0,0.899899717281399,0.988866362566974,0,0,0,0.518448061542388,0.945041568321835,0.420649922702764,0.571301968807607,0.441737081903227,0.244981598429908,0.383381884072945,0,2.20231761998777,0.383062014255563,0.614426133024974,0.131886287730194,1.73826522844578,0,2.79182999001381,0,1.22238598221448,0,0.569486723196412,0.186399445825301,0,0,0,0,0.679971333707751,0,1.29955283489534,0.896053774194671,0,0,0.519572009205738,0,0,0,0,0,0.432982082022428,1.01343946190039,1.51657333504435,0.5709193985953,0,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0.494389935468748,0,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0.41889341362691,0.255457055208591,0.11981512450592,0.599902730993408,0.127070227073065,0.149790639404823,0,0,0.173824320192276,0,0.41557608911912,0.162241263067758,0,0.124406970610093,0,0,0.260240885925407,0.229902104433473,0,0,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0.284163499395593,0,0,0,0.473489471170421,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0.201683524623343,0.667134131534611,0,0,0.658795818896044,0,0.795825888164603,0,0.898819408654221,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0,0.296452627087149,0.166845105716094,0.393117990226406,0,0.405720242777006,0.482354319504834,0,0.575392274901621,3.89124544260085,0,1.43768206527355,1.48856379067401,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0,0.160550589987792,0.117211686592203,0.163934945376675,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.445597348164788,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0,0.18006109403131,0,0.428674070063185,0.177340233642274,0.356737635204141,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0.370850604021019,0.512612642393558,0,0.185194527369712,0.188368457004691,3.8274383761887,0.228778173206523,0.339956859987711,0,0.138199973804424,0,0,0.203319467126849,0,0.209088296014469,0,0,0.0826534557253359,0.523511883968059,0.259229946583586,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0.209718688851422,0,0,0,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0.120195449519969,0,0.201932899896295,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0.0897138566094757,0.335769232728157,0,0.187682475451182,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,1.03552062350364,0.207574695168353,0,0.341467211508268,0,0,0,0,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.233931608445408,1.07435527024149,0,0.661774257358546,0 | |||
|short_description=p7@Cmas | |||
}} |
Latest revision as of 21:31, 26 September 2015
Short description: | p7@Cmas |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Cmas_5end |
Coexpression cluster: | NA |
Association with transcript: | 203bp_to_ENSMUST00000144920_5end |
EntrezGene: | Cmas |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 3.35e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.35e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.35e-08 | 3 |
neuron of the substantia nigra | 5.43e-08 | 3 |
duct epithelial cell | 1.02e-07 | 3 |
epithelial cell of tracheobronchial tree | 1.02e-07 | 3 |
branched duct epithelial cell | 1.02e-07 | 3 |
epithelial cell of lower respiratory tract | 1.02e-07 | 3 |
respiratory epithelial cell | 1.02e-07 | 3 |
tracheal epithelial cell | 1.02e-07 | 3 |
tracheoblast | 1.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 5.43e-08 | 3 |
telencephalic nucleus | 5.43e-08 | 3 |
midbrain nucleus | 5.43e-08 | 3 |
neural nucleus | 5.43e-08 | 3 |
nucleus of brain | 5.43e-08 | 3 |
trachea | 1.02e-07 | 3 |
respiratory airway | 1.02e-07 | 3 |
tracheobronchial tree | 1.02e-07 | 3 |
lower respiratory tract | 1.02e-07 | 3 |