FFCP PHASE1:Mm9::chr11:115196102..115196163,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:115196102..115196163,+
|short_description=p1@Otop3
|description=CAGE_peak_1_at_Otop3_5end
|association_with_transcript=54bp_to_ENSMUST00000019006,NM_02713...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=69602 | |EntrezGene=69602 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=F8VQ32,Q80UF9 | |UniProt=F8VQ32,Q80UF9 | ||
|association_with_transcript=54bp_to_ENSMUST00000019006,NM_027132,uc007mhe.1,uc007mhf.1_5end | |||
|cluster_id=chr11:115196102..115196163,+ | |||
|description=CAGE_peak_1_at_Otop3_5end | |||
|id=chr11:115196102..115196163,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.59e-08!9;CL:0002251!2.59e-08!9;CL:0000239!4.86e-07!6;CL:0000677!4.86e-07!6;CL:0000212!4.86e-07!6;CL:0000584!4.86e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.67e-12,6;CL:0000677,9.67e-12,6;CL:0000584,9.67e-12,6;CL:0000075,6.19e-10,7;CL:0002563,9.79e-10,9;CL:0002251,9.79e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.37e-17!59;UBERON:0000160!2.50e-14!43;UBERON:0000344!2.58e-08!15;UBERON:0003350!2.59e-08!9;UBERON:0004808!2.59e-08!9;UBERON:0001277!2.59e-08!9;UBERON:0000970!9.76e-08!9;UBERON:0000019!9.76e-08!9;UBERON:0000047!9.76e-08!9;UBERON:0004088!9.76e-08!9;UBERON:0002104!9.76e-08!9;UBERON:0001456!9.76e-08!9;UBERON:0003072!9.76e-08!9;UBERON:0003071!9.76e-08!9;UBERON:0004128!9.76e-08!9;UBERON:0001444!1.25e-07!11;UBERON:0000020!9.52e-07!12;UBERON:0001032!9.52e-07!12;UBERON:0004456!9.52e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.83e-23,47;UBERON:0000160,7.97e-20,31;UBERON:0000344,1.11e-11,15;UBERON:0001444,9.35e-10,11;UBERON:0003350,9.79e-10,9;UBERON:0004808,9.79e-10,9;UBERON:0001277,9.79e-10,9;UBERON:0001007,2.61e-09,116;UBERON:0001555,2.61e-09,116;UBERON:0007026,2.61e-09,116;UBERON:0000970,3.21e-09,9;UBERON:0000019,3.21e-09,9;UBERON:0000047,3.21e-09,9;UBERON:0010312,3.21e-09,9;UBERON:0004088,3.21e-09,9;UBERON:0002104,3.21e-09,9;UBERON:0001456,3.21e-09,9;UBERON:0003072,3.21e-09,9;UBERON:0004128,3.21e-09,9;UBERON:0003071,3.21e-09,9;UBERON:0004119,5.09e-09,118;UBERON:0000925,5.09e-09,118;UBERON:0006595,5.09e-09,118;UBERON:0000020,8.09e-09,12;UBERON:0001032,8.09e-09,12;UBERON:0004456,8.09e-09,12;UBERON:0001242,1.57e-08,13;UBERON:0001262,1.57e-08,13;UBERON:0004786,1.57e-08,13;UBERON:0000033,5.01e-08,13;UBERON:0004921,8.75e-08,114;UBERON:0000485,9.50e-08,11 | |||
|phase1_expression=0,5.23463111459042,10.0099832665698,40.5302043151152,31.0555352566735,2.35030980676646,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6788785734242,18.8115610475079,2.8711598205751,14.6459078694085,5.817723282519,0,0,0,0,0,0,0.577703239502549,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,1.12552522006336,0,0.294628585473668,0.854230084794618,0.559198337475902,0,0,0,0,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0.502666365318702,0,0,0,0,0,0,0,0,0,19.9256503062701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0.260240885925407,1.60931473103431,1.80062129805349,4.06903008156431,8.02830689985669,6.53379973452734,8.90166383317424,2.58703370739016,0,0,0,0,0,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,210.476764760679,4.23120906661671,0,0,0.38660238396628,0.403367049246685,0.444756087689741,1.71203063501303,12.8122846617018,1.15289268306808,1.50801125280162,1.1937388322469,1.16978452271472,16.178749355776,3.24207074812041,23.1003876975066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63863314715738,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,1.21390318077491,1.209294227859,0.377210159511796,1.18120757152309,0.307435147943927,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30840754118072,1.29171541356724,0.784068024066026,0.358117032009409,0.492422699235184,11.659233465194,0,0,0.412773735926445,0,0,0,0,0,0,0,10.5013767981662,0.158167996790568,0,2.59212817972323,6.27264888043406,6.55087691238533,9.17077555416781,7.27350410382956,16.7523802869779,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,14.2840141677583,0,0,0,0,0,0,1.71494703263253,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0.666740183404846,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0.128050304809739,0.114870937911227,0,0.347652977834566,0,0,0,0.342869252385415,0,0,0.290692833264657,0,0.169229215783353,0.548783918618318,0.263069711437843,0.407412341537585,0,0.474540072496697,0,0.818462086339379,0.619747364743864,0.578719832943424,0.999242311751784,0.701794825336225,0.429742108096597,0,0.441182838239031,0 | |phase1_expression=0,5.23463111459042,10.0099832665698,40.5302043151152,31.0555352566735,2.35030980676646,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6788785734242,18.8115610475079,2.8711598205751,14.6459078694085,5.817723282519,0,0,0,0,0,0,0.577703239502549,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,1.12552522006336,0,0.294628585473668,0.854230084794618,0.559198337475902,0,0,0,0,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0.502666365318702,0,0,0,0,0,0,0,0,0,19.9256503062701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0.260240885925407,1.60931473103431,1.80062129805349,4.06903008156431,8.02830689985669,6.53379973452734,8.90166383317424,2.58703370739016,0,0,0,0,0,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,210.476764760679,4.23120906661671,0,0,0.38660238396628,0.403367049246685,0.444756087689741,1.71203063501303,12.8122846617018,1.15289268306808,1.50801125280162,1.1937388322469,1.16978452271472,16.178749355776,3.24207074812041,23.1003876975066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63863314715738,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,1.21390318077491,1.209294227859,0.377210159511796,1.18120757152309,0.307435147943927,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30840754118072,1.29171541356724,0.784068024066026,0.358117032009409,0.492422699235184,11.659233465194,0,0,0.412773735926445,0,0,0,0,0,0,0,10.5013767981662,0.158167996790568,0,2.59212817972323,6.27264888043406,6.55087691238533,9.17077555416781,7.27350410382956,16.7523802869779,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,14.2840141677583,0,0,0,0,0,0,1.71494703263253,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0.666740183404846,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0.128050304809739,0.114870937911227,0,0.347652977834566,0,0,0,0.342869252385415,0,0,0.290692833264657,0,0.169229215783353,0.548783918618318,0.263069711437843,0.407412341537585,0,0.474540072496697,0,0.818462086339379,0.619747364743864,0.578719832943424,0.999242311751784,0.701794825336225,0.429742108096597,0,0.441182838239031,0 | ||
|short_description=p1@Otop3 | |||
}} | }} |
Latest revision as of 23:07, 26 September 2015
Short description: | p1@Otop3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Otop3_5end |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | 54bp_to_ENSMUST00000019006, NM_027132, uc007mhe.1, uc007mhf.1_5end |
EntrezGene: | Otop3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.67e-12 | 6 |
gut absorptive cell | 9.67e-12 | 6 |
enterocyte | 9.67e-12 | 6 |
columnar/cuboidal epithelial cell | 6.19e-10 | 7 |
intestinal epithelial cell | 9.79e-10 | 9 |
epithelial cell of alimentary canal | 9.79e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.83e-23 | 47 |
intestine | 7.97e-20 | 31 |
mucosa | 1.11e-11 | 15 |
subdivision of head | 9.35e-10 | 11 |
epithelium of mucosa | 9.79e-10 | 9 |
gastrointestinal system epithelium | 9.79e-10 | 9 |
intestinal epithelium | 9.79e-10 | 9 |
digestive system | 2.61e-09 | 116 |
digestive tract | 2.61e-09 | 116 |
primitive gut | 2.61e-09 | 116 |
eye | 3.21e-09 | 9 |
camera-type eye | 3.21e-09 | 9 |
simple eye | 3.21e-09 | 9 |
immature eye | 3.21e-09 | 9 |
ocular region | 3.21e-09 | 9 |
visual system | 3.21e-09 | 9 |
face | 3.21e-09 | 9 |
optic cup | 3.21e-09 | 9 |
optic vesicle | 3.21e-09 | 9 |
eye primordium | 3.21e-09 | 9 |
endoderm-derived structure | 5.09e-09 | 118 |
endoderm | 5.09e-09 | 118 |
presumptive endoderm | 5.09e-09 | 118 |
sense organ | 8.09e-09 | 12 |
sensory system | 8.09e-09 | 12 |
entire sense organ system | 8.09e-09 | 12 |
intestinal mucosa | 1.57e-08 | 13 |
wall of intestine | 1.57e-08 | 13 |
gastrointestinal system mucosa | 1.57e-08 | 13 |
head | 5.01e-08 | 13 |
subdivision of digestive tract | 8.75e-08 | 114 |
simple columnar epithelium | 9.50e-08 | 11 |