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FFCP PHASE1:Mm9::chr7:148661339..148661354,+: Difference between revisions

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{{FFCP|EntrezGene=64540|HGNC=|UniProt=D3Z0B7|association_with_transcript=-54bp_to_ENSMUST00000138092_5end|description=CAGE_peak_3_at_Tspan4_5end|id=chr7:148661339..148661354,+|ontology_enrichment_celltype=CL:0000219!1.94e-07!54|ontology_enrichment_celltype_v019_2=CL:0000219,6.32e-09,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.16e-14!47;UBERON:0009569!6.94e-14!66;UBERON:0005172!3.61e-13!49;UBERON:0005173!3.61e-13!49;UBERON:0002417!3.61e-13!49;UBERON:0000916!3.61e-13!49;UBERON:0000926!1.22e-12!193;UBERON:0004120!1.22e-12!193;UBERON:0006603!1.22e-12!193;UBERON:0002107!6.70e-12!22;UBERON:0007499!6.70e-12!22;UBERON:0006925!6.70e-12!22;UBERON:0009497!6.70e-12!22;UBERON:0000015!6.70e-12!22;UBERON:0002423!6.70e-12!22;UBERON:0006235!6.70e-12!22;UBERON:0008835!6.70e-12!22;UBERON:0003894!6.70e-12!22;UBERON:0004161!6.70e-12!22;UBERON:0008836!6.70e-12!22;UBERON:0005177!1.65e-11!85;UBERON:0000466!4.40e-11!79;UBERON:0002365!4.58e-11!25;UBERON:0002330!4.58e-11!25;UBERON:0002100!9.11e-11!98;UBERON:0009854!1.54e-10!23;UBERON:0009856!1.54e-10!23;UBERON:0005256!1.42e-08!47|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.36e-15,47;UBERON:0005177,2.65e-14,79;UBERON:0009569,3.77e-14,66;UBERON:0002100,4.98e-14,90;UBERON:0005172,1.16e-13,49;UBERON:0005173,1.16e-13,49;UBERON:0002417,1.16e-13,49;UBERON:0000916,1.16e-13,49;UBERON:0002107,2.57e-12,22;UBERON:0007499,2.57e-12,22;UBERON:0006925,2.57e-12,22;UBERON:0009497,2.57e-12,22;UBERON:0000015,2.57e-12,22;UBERON:0002423,2.57e-12,22;UBERON:0006235,2.57e-12,22;UBERON:0008835,2.57e-12,22;UBERON:0003894,2.57e-12,22;UBERON:0004161,2.57e-12,22;UBERON:0008836,2.57e-12,22;UBERON:0002365,1.90e-11,25;UBERON:0002330,1.90e-11,25;UBERON:0009854,3.75e-11,23;UBERON:0009856,3.75e-11,23;UBERON:0005256,7.68e-10,45;UBERON:0003104,1.26e-09,61;UBERON:0009142,1.26e-09,61|phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,0,0,0,0.513653904676515,0.8774937489487,0,0,4.66353666541928,2.63217847606774,3.49780939064073,0.157731082679119,0.548457734422955,0,3.656861476496,4.36880185283895,3.91799683708403,0.159992422793407,0.22940928106717,0,0,0,0,0,0.443461021310609,15.2407361630311,12.916360539276,0,0.288851619751275,0.498703936075477,0,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0,5.91715044485213,4.8660926985367,4.03802854755699,14.8654355426127,9.81113203712009,7.46933021297204,9.72149495371417,8.67915814077248,15.8127820801469,0,0,0,5.14518872071894,8.02293631828519,6.18806510732931,0.202316460859598,1.5869729378161,0,11.1818695582814,11.5608323494448,8.54904731417329,6.92206453796882,8.5257613793532,9.58720353658895,7.30014780110954,0,0.405017814995072,0.210324961351382,0.571301968807607,0.441737081903227,0.244981598429908,0.191690942036473,0,1.10115880999389,0.510749352340751,0.307213066512487,0.791317726381163,0.274462930807229,0.52091337055676,0.558365998002762,0,0.763991238884051,2.06240009831567,0.854230084794618,0.186399445825301,4.24066682665831,2.94729084416464,4.34796733052517,8.60423876981386,17.6792546764015,21.0484244738749,23.3919510281161,16.5769948226014,3.65155492342555,2.72688516124892,5.45550609666024,7.0667914902068,0.845060518660083,2.56652954828636,0,7.11066703153331,4.11332977921307,2.02687892380079,3.0331466700887,5.709193985953,1.03575153458869,4.15637989381509,4.3371331691534,4.56698217468212,2.53677046981664,3.46662073271032,1.88141931417128,4.52399728786832,0.741584903203122,6.65157041831594,0.884610551949874,2.10296904931632,0.883366073841574,2.90925151881133,0,0.878342391034642,0,0,6.23038647430785,8.39863823390771,5.33694953706872,0.449371918214468,0,0.251308704225729,0.173824320192276,0.255715457330331,0.62336413367868,0.811206315338788,4.17541391786297,1.61729061793121,0.758168275301024,0.420883711772948,1.04096354370163,1.37941262660084,0.180062129805349,1.80845781402858,0.816437989815934,1.2811372028485,1.12442069471675,1.29351685369508,1.07783996466421,1.32374256117473,0.703804496655795,2.19195732427575,2.50242524303038,1.39300866608867,1.23469281844766,4.37875387000685,8.42655824775882,8.23513302767089,5.68326998791185,2.69263504296152,3.04883877975425,2.70093092191522,1.18372367792605,2.95146347621106,2.31400669331067,2.09280550275367,3.75582761959467,2.91913355917924,3.29119699826961,3.61168420974009,3.08061476274252,2.33919979880532,3.51280184465681,2.28150911892632,0.420579897128254,0.823236899034275,0,0.528901133327089,1.70630600428187,2.32236671860439,1.67527699718721,0.80673409849337,0.667134131534611,1.52180500890047,0.474529061544512,0.988193728344065,1.00534083520108,0.795825888164603,1.36474860983384,0.898819408654221,0,0.199141273254367,3.60369011810855,2.74196430263349,1.1270773567308,3.66572390121566,1.93952487167626,3.15611189506434,3.98390183882821,6.34723636312289,4.70996183524124,7.03363834354263,15.4155366085317,3.00321190288969,5.89676985339609,2.24862112384854,4.26006254915856,6.02942899381042,5.85639459097266,5.17853047411459,4.86405680325106,9.06052663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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=64540
|HGNC=
|TSSclassifier=NA
|UniProt=D3Z0B7
|association_with_transcript=-54bp_to_ENSMUST00000138092_5end
|cluster_id=chr7:148661339..148661354,+
|description=CAGE_peak_3_at_Tspan4_5end
|id=chr7:148661339..148661354,+
|ontology_enrichment_celltype=CL:0000219!1.94e-07!54
|ontology_enrichment_celltype_v019_2=CL:0000219,6.32e-09,54
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!1.16e-14!47;UBERON:0009569!6.94e-14!66;UBERON:0005172!3.61e-13!49;UBERON:0005173!3.61e-13!49;UBERON:0002417!3.61e-13!49;UBERON:0000916!3.61e-13!49;UBERON:0000926!1.22e-12!193;UBERON:0004120!1.22e-12!193;UBERON:0006603!1.22e-12!193;UBERON:0002107!6.70e-12!22;UBERON:0007499!6.70e-12!22;UBERON:0006925!6.70e-12!22;UBERON:0009497!6.70e-12!22;UBERON:0000015!6.70e-12!22;UBERON:0002423!6.70e-12!22;UBERON:0006235!6.70e-12!22;UBERON:0008835!6.70e-12!22;UBERON:0003894!6.70e-12!22;UBERON:0004161!6.70e-12!22;UBERON:0008836!6.70e-12!22;UBERON:0005177!1.65e-11!85;UBERON:0000466!4.40e-11!79;UBERON:0002365!4.58e-11!25;UBERON:0002330!4.58e-11!25;UBERON:0002100!9.11e-11!98;UBERON:0009854!1.54e-10!23;UBERON:0009856!1.54e-10!23;UBERON:0005256!1.42e-08!47
|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.36e-15,47;UBERON:0005177,2.65e-14,79;UBERON:0009569,3.77e-14,66;UBERON:0002100,4.98e-14,90;UBERON:0005172,1.16e-13,49;UBERON:0005173,1.16e-13,49;UBERON:0002417,1.16e-13,49;UBERON:0000916,1.16e-13,49;UBERON:0002107,2.57e-12,22;UBERON:0007499,2.57e-12,22;UBERON:0006925,2.57e-12,22;UBERON:0009497,2.57e-12,22;UBERON:0000015,2.57e-12,22;UBERON:0002423,2.57e-12,22;UBERON:0006235,2.57e-12,22;UBERON:0008835,2.57e-12,22;UBERON:0003894,2.57e-12,22;UBERON:0004161,2.57e-12,22;UBERON:0008836,2.57e-12,22;UBERON:0002365,1.90e-11,25;UBERON:0002330,1.90e-11,25;UBERON:0009854,3.75e-11,23;UBERON:0009856,3.75e-11,23;UBERON:0005256,7.68e-10,45;UBERON:0003104,1.26e-09,61;UBERON:0009142,1.26e-09,61
|phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,0,0,0,0.513653904676515,0.8774937489487,0,0,4.66353666541928,2.63217847606774,3.49780939064073,0.157731082679119,0.548457734422955,0,3.656861476496,4.36880185283895,3.91799683708403,0.159992422793407,0.22940928106717,0,0,0,0,0,0.443461021310609,15.2407361630311,12.916360539276,0,0.288851619751275,0.498703936075477,0,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0,5.91715044485213,4.8660926985367,4.03802854755699,14.8654355426127,9.81113203712009,7.46933021297204,9.72149495371417,8.67915814077248,15.8127820801469,0,0,0,5.14518872071894,8.02293631828519,6.18806510732931,0.202316460859598,1.5869729378161,0,11.1818695582814,11.5608323494448,8.54904731417329,6.92206453796882,8.5257613793532,9.58720353658895,7.30014780110954,0,0.405017814995072,0.210324961351382,0.571301968807607,0.441737081903227,0.244981598429908,0.191690942036473,0,1.10115880999389,0.510749352340751,0.307213066512487,0.791317726381163,0.274462930807229,0.52091337055676,0.558365998002762,0,0.763991238884051,2.06240009831567,0.854230084794618,0.186399445825301,4.24066682665831,2.94729084416464,4.34796733052517,8.60423876981386,17.6792546764015,21.0484244738749,23.3919510281161,16.5769948226014,3.65155492342555,2.72688516124892,5.45550609666024,7.0667914902068,0.845060518660083,2.56652954828636,0,7.11066703153331,4.11332977921307,2.02687892380079,3.0331466700887,5.709193985953,1.03575153458869,4.15637989381509,4.3371331691534,4.56698217468212,2.53677046981664,3.46662073271032,1.88141931417128,4.52399728786832,0.741584903203122,6.65157041831594,0.884610551949874,2.10296904931632,0.883366073841574,2.90925151881133,0,0.878342391034642,0,0,6.23038647430785,8.39863823390771,5.33694953706872,0.449371918214468,0,0.251308704225729,0.173824320192276,0.255715457330331,0.62336413367868,0.811206315338788,4.17541391786297,1.61729061793121,0.758168275301024,0.420883711772948,1.04096354370163,1.37941262660084,0.180062129805349,1.80845781402858,0.816437989815934,1.2811372028485,1.12442069471675,1.29351685369508,1.07783996466421,1.32374256117473,0.703804496655795,2.19195732427575,2.50242524303038,1.39300866608867,1.23469281844766,4.37875387000685,8.42655824775882,8.23513302767089,5.68326998791185,2.69263504296152,3.04883877975425,2.70093092191522,1.18372367792605,2.95146347621106,2.31400669331067,2.09280550275367,3.75582761959467,2.91913355917924,3.29119699826961,3.61168420974009,3.08061476274252,2.33919979880532,3.51280184465681,2.28150911892632,0.420579897128254,0.823236899034275,0,0.528901133327089,1.70630600428187,2.32236671860439,1.67527699718721,0.80673409849337,0.667134131534611,1.52180500890047,0.474529061544512,0.988193728344065,1.00534083520108,0.795825888164603,1.36474860983384,0.898819408654221,0,0.199141273254367,3.60369011810855,2.74196430263349,1.1270773567308,3.66572390121566,1.93952487167626,3.15611189506434,3.98390183882821,6.34723636312289,4.70996183524124,7.03363834354263,15.4155366085317,3.00321190288969,5.89676985339609,2.24862112384854,4.26006254915856,6.02942899381042,5.85639459097266,5.17853047411459,4.86405680325106,9.06052663520669,5.75072826109418,7.07067800570156,8.7370548472077,10.8608917517258,12.3784215330119,9.16642690590398,2.77129785249907,3.22135400009824,2.11854469374634,4.2436271443797,2.58159273117352,2.84760637651087,2.38043640886014,2.14647012643579,2.52216230569906,2.21464689648775,0.956728611944923,2.62181303545181,2.41758974612254,1.3018415272336,6.03165135757089,2.71952841909355,1.47529281905711,3.86311444826625,0.963303539926752,0.586058432961016,4.42624352517024,0.757412781613119,0.631016438832513,3.90438744296638,1.29254038639679,1.91175038362042,3.11918143715352,1.69845918473299,1.21443210502468,1.46127928955656,1.18586333383957,0.963963949265421,3.12268187458191,5.34196811001766,2.60619134965722,2.3095817216155,5.30980553359851,5.58395463156457,4.83717691143602,2.26326095707078,3.83892460745005,2.76691633149535,0.775284879504663,3.27180356529755,2.13898427030833,2.52829406348653,1.05418608574999,0,0,1.08036656418786,2.19909762430683,1.92903331528433,0.532020700926821,0.713475270408282,1.97458824722545,1.8267896946876,0.938686832254841,0.847328283455281,0,1.15420377059036,0.645857706783622,1.14594557363496,1.67121281604391,0.656563598980245,1.1659233465194,0.370850604021019,1.70870880797853,3.30218988741156,3.1483069652851,3.01389531207506,1.77702496037333,3.20289442489132,3.39956859987711,4.19854356970974,3.17859939750175,1.90934123603023,2.68885594543965,1.62655573701479,1.51207477150522,2.09088296014469,1.52853794622324,2.29269388854195,2.47960367176008,2.09404753587224,0.648074866458964,1.24267862617385,0.56369293868419,2.54178128274764,5.46013018508422,4.66682852025714,3.7456348808542,3.8859908862879,3.52071715937262,2.3436789271911,1.8874681996628,1.20792060413003,0.864090018773596,0,3.44632865993279,1.74608627180206,2.07873316764472,1.07416017400489,1.19208812868759,0.600977247599844,0.738447635872886,0.302899349844443,0.609654453239999,0.806609481094724,0.38983152295901,0.0962118416403295,0.116876902181569,1.36038230169127,3.7737612073591,3.76798197759798,4.19711540910196,1.15913756419314,1.87682475451182,1.28206136987086,0.857473516316263,0,0.564751842617067,0.460325236507177,1.14579102687879,1.20297227640581,0,0,1.35004500046361,0,0.453142408984205,0,0.62272408550506,1.59609949360412,1.87806966329548,1.70174701947806,1.67690530102386,0.919217542250071,2.889207461421,2.06035057238894,1.92551525755089,2.77966932940177,1.2673964994512,1.69763707247469,1.40462261204824,1.47257850531199,1.37845125493472,0.476293691283074,1.39061191133827,0.964546102318525,1.64834360321323,2.35518272215036,2.40008476669791,1.95223386775271,1.66905332963125,1.88950341622027,1.97629698872194,1.60767754994185,1.46342378298218,3.15683653725411,2.03706170768793,1.68342681497322,3.2031454893527,1.67457620038458,1.22769312950907,1.85924209423159,2.12197272079256,0.749431733813838,2.10538447600868,2.57845264857958,1.72159498861959,2.64709702943419,2.78241402744506
|short_description=p3@Tspan4
}}

Latest revision as of 04:08, 26 September 2015

Short description:p3@Tspan4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tspan4_5end
Coexpression cluster:NA
Association with transcript: -54bp_to_ENSMUST00000138092_5end
EntrezGene:Tspan4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tspan4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.88
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.87
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.81
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.47
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C611.18
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C89.59
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D94.24
Mouse Schwann, donor2.CNhs12573.11746-123F92.95
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C417.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C821.05
Mouse hepatocyte, donor6.CNhs13090.11822-124F423.39
Mouse hepatocyte, donor8.CNhs13091.11824-124F616.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.71
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D74.16
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I34.52
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H16.65
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.23
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.34
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.24
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.68
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E32.92
heart, neonate N03.CNhs11221.1349-25I23.29
heart, neonate N10.CNhs11118.749-24G13.61
heart, neonate N16.CNhs11209.782-15G13.08
heart, neonate N20.CNhs11127.821-26I62.34
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I93.60
kidney, embryo E15.CNhs10997.434-16F82.74
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G73.16
kidney, neonate N10.CNhs11206.758-6D53.98
kidney, neonate N20.CNhs11113.832-19I16.35
kidney, neonate N25.CNhs11122.1353-25F34.71
kidney, neonate N30.CNhs11203.1385-42H17.03
liver, adult pregnant day01.CNhs10466.508-5B215.42
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H65.90
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D74.26
liver, embryo E16.CNhs10523.462-17F56.03
liver, embryo E17.CNhs10510.481-18A35.86
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F44.86
liver, neonate N03.CNhs11123.1345-25G29.06
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B98.74
liver, neonate N20.CNhs11220.823-25A310.86
liver, neonate N25.CNhs11198.1368-26H112.38
liver, neonate N30.CNhs11106.1382-42D19.17
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G23.22
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C54.24
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F45.58
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C13.30
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.18
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A92.48
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C55.46
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I53.75
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.20
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
motile cell6.32e-0954

Uber anatomy
Ontology termp-valuen
epithelial tube5.36e-1547
trunk region element2.65e-1479
subdivision of trunk3.77e-1466
trunk4.98e-1490
abdomen element1.16e-1349
abdominal segment element1.16e-1349
abdominal segment of trunk1.16e-1349
abdomen1.16e-1349
liver2.57e-1222
epithelial sac2.57e-1222
digestive gland2.57e-1222
epithelium of foregut-midgut junction2.57e-1222
anatomical boundary2.57e-1222
hepatobiliary system2.57e-1222
foregut-midgut junction2.57e-1222
hepatic diverticulum2.57e-1222
liver primordium2.57e-1222
septum transversum2.57e-1222
liver bud2.57e-1222
exocrine gland1.90e-1125
exocrine system1.90e-1125
digestive tract diverticulum3.75e-1123
sac3.75e-1123
trunk mesenchyme7.68e-1045
mesenchyme1.26e-0961
entire embryonic mesenchyme1.26e-0961
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