FFCP PHASE1:Mm9::chr8:4349596..4349611,+: Difference between revisions
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{{FFCP|EntrezGene=20300|HGNC=|MCL_coexpression_id=12|UniProt=Q9QYY6,Q3V2F3|association_with_transcript=8bp_to_ENSMUST00000024004,ENSMUST00000110982,NM_009138,uc009ktw.2_5end|description=CAGE_peak_1_at_Ccl25_5end|id=chr8:4349596..4349611,+|ontology_enrichment_celltype=CL:0002563!1.11e-08!9;CL:0002251!1.11e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.95e-10,9;CL:0002251,2.95e-10,9;CL:0000239,1.05e-07,6;CL:0000677,1.05e-07,6;CL:0000584,1.05e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.77e-15!43;UBERON:0000344!3.95e-14!15;UBERON:0005409!5.96e-14!59;UBERON:0001242!3.08e-12!13;UBERON:0000060!3.08e-12!13;UBERON:0001262!3.08e-12!13;UBERON:0004786!3.08e-12!13;UBERON:0001007!4.82e-11!128;UBERON:0001555!4.82e-11!128;UBERON:0007026!4.82e-11!128;UBERON:0004119!4.89e-11!130;UBERON:0000925!4.89e-11!130;UBERON:0006595!4.89e-11!130;UBERON:0004921!6.59e-10!126;UBERON:0004185!6.59e-10!126;UBERON:0003350!1.11e-08!9;UBERON:0004808!1.11e-08!9;UBERON:0001277!1.11e-08!9;UBERON:0004923!1.13e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.68e-26,31;UBERON:0005409,1.93e-19,47;UBERON:0000344,6.62e-17,15;UBERON:0001242,1.35e-14,13;UBERON:0001262,1.35e-14,13;UBERON:0004786,1.35e-14,13;UBERON:0001007,1.72e-12,116;UBERON:0001555,1.72e-12,116;UBERON:0007026,1.72e-12,116;UBERON:0004119,5.38e-12,118;UBERON:0000925,5.38e-12,118;UBERON:0006595,5.38e-12,118;UBERON:0004921,4.02e-11,114;UBERON:0003350,2.95e-10,9;UBERON:0004808,2.95e-10,9;UBERON:0001277,2.95e-10,9;UBERON:0004923,1.75e-08,24;UBERON:0000485,7.20e-08,11|phase1_expression=0,1105.20511599386,1068.79321332602,846.597327447817,673.203861047891,402.070856228976,597.81474728395,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60989178707088,0,0,1392.57404799381,1236.97484351418,1312.12003800282,1183.73396544514,1089.85349492523,1719.14187582181,1071.38008160947,911.977590325268,0,0,0,301.849942640082,306.869155331777,306.662373106078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,43.9591035012383,0,0,0,0,0,0,0,0,0,0,116.353373433722,0,0,3.46970653532272,0,0.230615497256059,0,0,0.502666365318702,0.247194967734374,0,0,0,0,0.484875253135222,11.1835056730873,0,0,639.153552131896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0.215567992932842,0,0,0,0,0,0.205782136407943,2.58744546864041,0,0,0,0,1.87620847984877,0,2.60419209143731,4.32881309844288,0,0,0,1.98501082024188,0,0,0.243206428637567,0.292399974850665,0,0.402619256281115,0,0,633.412806979941,471.515360361099,0,0,17.5259747398047,82.2868780463237,115.191826711643,135.25042016603,466.936596559799,242.27216239902,111.84416791612,121.164491473061,111.714421919256,435.028593788643,539.264434437362,587.267614827129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,1.52775511068852,0,0,0,0,0,0,0,0,0,0,2.4633883530163,0,0.678980343100753,0.234690248288502,4.69017520837084,0.238043640886014,0.780534591431195,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.604647113929502,0,0,0.307435147943927,28.6855405416725,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0.220528398054962,0.16488625294148,0,0,0.358117032009409,0.984845398470368,440.136063311075,0,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0,1.01659733563424,7.34436317588249,1.67270636811575,11.7915784422936,0.134864346384821,1.57041565878138,0,0.777689839750757,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,476.544769907293,180.425441608246,323.436804112041,273.093569899325,208.387073756948,225.503337676736,249.886339552015,274.407141490364,296.53846349771,255.216595487594,268.096826278859,352.700070397164,345.689147013704,381.486208720641,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,2.18796045361465,1.04806581313991,3.49302666055027,9.55660929546946,8.44743734679466,10.5903339165299,5.81203587056734,10.1391719956096,8.29955902098735,6.27398100048212,6.6586158501064,5.22662767496081,5.23923060411381,4.40360438590451,7.13764115715709,9.06588981767275,9.86232764900462,7.20025430009372,7.80893547101085,5.24559617884106,8.43009216467505,7.0582035311498,6.26148098398406,6.76833499629258,5.78753365163254,6.79020569229309,7.85599180320834,5.93175090620871,6.00877342490937,7.7753898202241,6.19747364743864,6.36591816237767,0,10.292990771598,7.95022899978704,0.191288332068843,0.441182838239031,0|short_description=p1@Ccl25}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20300 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QYY6,Q3V2F3 | |||
|association_with_transcript=8bp_to_ENSMUST00000024004,ENSMUST00000110982,NM_009138,uc009ktw.2_5end | |||
|cluster_id=chr8:4349596..4349611,+ | |||
|description=CAGE_peak_1_at_Ccl25_5end | |||
|id=chr8:4349596..4349611,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.11e-08!9;CL:0002251!1.11e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.95e-10,9;CL:0002251,2.95e-10,9;CL:0000239,1.05e-07,6;CL:0000677,1.05e-07,6;CL:0000584,1.05e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.77e-15!43;UBERON:0000344!3.95e-14!15;UBERON:0005409!5.96e-14!59;UBERON:0001242!3.08e-12!13;UBERON:0000060!3.08e-12!13;UBERON:0001262!3.08e-12!13;UBERON:0004786!3.08e-12!13;UBERON:0001007!4.82e-11!128;UBERON:0001555!4.82e-11!128;UBERON:0007026!4.82e-11!128;UBERON:0004119!4.89e-11!130;UBERON:0000925!4.89e-11!130;UBERON:0006595!4.89e-11!130;UBERON:0004921!6.59e-10!126;UBERON:0004185!6.59e-10!126;UBERON:0003350!1.11e-08!9;UBERON:0004808!1.11e-08!9;UBERON:0001277!1.11e-08!9;UBERON:0004923!1.13e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.68e-26,31;UBERON:0005409,1.93e-19,47;UBERON:0000344,6.62e-17,15;UBERON:0001242,1.35e-14,13;UBERON:0001262,1.35e-14,13;UBERON:0004786,1.35e-14,13;UBERON:0001007,1.72e-12,116;UBERON:0001555,1.72e-12,116;UBERON:0007026,1.72e-12,116;UBERON:0004119,5.38e-12,118;UBERON:0000925,5.38e-12,118;UBERON:0006595,5.38e-12,118;UBERON:0004921,4.02e-11,114;UBERON:0003350,2.95e-10,9;UBERON:0004808,2.95e-10,9;UBERON:0001277,2.95e-10,9;UBERON:0004923,1.75e-08,24;UBERON:0000485,7.20e-08,11 | |||
|phase1_expression=0,1105.20511599386,1068.79321332602,846.597327447817,673.203861047891,402.070856228976,597.81474728395,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60989178707088,0,0,1392.57404799381,1236.97484351418,1312.12003800282,1183.73396544514,1089.85349492523,1719.14187582181,1071.38008160947,911.977590325268,0,0,0,301.849942640082,306.869155331777,306.662373106078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,43.9591035012383,0,0,0,0,0,0,0,0,0,0,116.353373433722,0,0,3.46970653532272,0,0.230615497256059,0,0,0.502666365318702,0.247194967734374,0,0,0,0,0.484875253135222,11.1835056730873,0,0,639.153552131896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0.215567992932842,0,0,0,0,0,0.205782136407943,2.58744546864041,0,0,0,0,1.87620847984877,0,2.60419209143731,4.32881309844288,0,0,0,1.98501082024188,0,0,0.243206428637567,0.292399974850665,0,0.402619256281115,0,0,633.412806979941,471.515360361099,0,0,17.5259747398047,82.2868780463237,115.191826711643,135.25042016603,466.936596559799,242.27216239902,111.84416791612,121.164491473061,111.714421919256,435.028593788643,539.264434437362,587.267614827129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,1.52775511068852,0,0,0,0,0,0,0,0,0,0,2.4633883530163,0,0.678980343100753,0.234690248288502,4.69017520837084,0.238043640886014,0.780534591431195,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.604647113929502,0,0,0.307435147943927,28.6855405416725,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0.220528398054962,0.16488625294148,0,0,0.358117032009409,0.984845398470368,440.136063311075,0,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0,1.01659733563424,7.34436317588249,1.67270636811575,11.7915784422936,0.134864346384821,1.57041565878138,0,0.777689839750757,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,476.544769907293,180.425441608246,323.436804112041,273.093569899325,208.387073756948,225.503337676736,249.886339552015,274.407141490364,296.53846349771,255.216595487594,268.096826278859,352.700070397164,345.689147013704,381.486208720641,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,2.18796045361465,1.04806581313991,3.49302666055027,9.55660929546946,8.44743734679466,10.5903339165299,5.81203587056734,10.1391719956096,8.29955902098735,6.27398100048212,6.6586158501064,5.22662767496081,5.23923060411381,4.40360438590451,7.13764115715709,9.06588981767275,9.86232764900462,7.20025430009372,7.80893547101085,5.24559617884106,8.43009216467505,7.0582035311498,6.26148098398406,6.76833499629258,5.78753365163254,6.79020569229309,7.85599180320834,5.93175090620871,6.00877342490937,7.7753898202241,6.19747364743864,6.36591816237767,0,10.292990771598,7.95022899978704,0.191288332068843,0.441182838239031,0 | |||
|short_description=p1@Ccl25 | |||
}} |
Latest revision as of 13:35, 25 September 2015
Short description: | p1@Ccl25 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ccl25_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 8bp_to_ENSMUST00000024004, ENSMUST00000110982, NM_009138, uc009ktw.2_5end |
EntrezGene: | Ccl25 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.95e-10 | 9 |
epithelial cell of alimentary canal | 2.95e-10 | 9 |
brush border epithelial cell | 1.05e-07 | 6 |
gut absorptive cell | 1.05e-07 | 6 |
enterocyte | 1.05e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.68e-26 | 31 |
gastrointestinal system | 1.93e-19 | 47 |
mucosa | 6.62e-17 | 15 |
intestinal mucosa | 1.35e-14 | 13 |
wall of intestine | 1.35e-14 | 13 |
gastrointestinal system mucosa | 1.35e-14 | 13 |
digestive system | 1.72e-12 | 116 |
digestive tract | 1.72e-12 | 116 |
primitive gut | 1.72e-12 | 116 |
endoderm-derived structure | 5.38e-12 | 118 |
endoderm | 5.38e-12 | 118 |
presumptive endoderm | 5.38e-12 | 118 |
subdivision of digestive tract | 4.02e-11 | 114 |
epithelium of mucosa | 2.95e-10 | 9 |
gastrointestinal system epithelium | 2.95e-10 | 9 |
intestinal epithelium | 2.95e-10 | 9 |
organ component layer | 1.75e-08 | 24 |
simple columnar epithelium | 7.20e-08 | 11 |