FFCP PHASE1:Mm9::chr11:72249013..72249031,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:72249013..72249031,+
|short_description=p2@Ggt6
|description=CAGE_peak_2_at_Ggt6_5end
|association_with_transcript=0bp_to_ENSMUST00000076443,NM_027819,uc0...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71522 | |EntrezGene=71522 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=395 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PDE7,Q7TNR0 | |UniProt=Q6PDE7,Q7TNR0 | ||
|association_with_transcript=0bp_to_ENSMUST00000076443,NM_027819,uc007jyw.1,uc007jyx.1_5end | |||
|cluster_id=chr11:72249013..72249031,+ | |||
|description=CAGE_peak_2_at_Ggt6_5end | |||
|id=chr11:72249013..72249031,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.61e-08!9;CL:0002251!1.61e-08!9;CL:0000066!3.72e-08!25;CL:0000223!1.74e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.14e-13,9;CL:0002251,5.14e-13,9;CL:0000066,1.87e-11,25;CL:0000223,1.23e-09,20;CL:0000239,2.46e-09,6;CL:0000677,2.46e-09,6;CL:0000584,2.46e-09,6;CL:0000075,8.18e-08,7;CL:0002076,8.22e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.09e-16!43;UBERON:0005409!6.02e-16!59;UBERON:0001007!2.14e-13!128;UBERON:0001555!2.14e-13!128;UBERON:0007026!2.14e-13!128;UBERON:0000344!3.09e-13!15;UBERON:0004119!9.17e-13!130;UBERON:0000925!9.17e-13!130;UBERON:0006595!9.17e-13!130;UBERON:0004921!2.66e-12!126;UBERON:0004185!2.66e-12!126;UBERON:0001242!8.93e-12!13;UBERON:0000060!8.93e-12!13;UBERON:0001262!8.93e-12!13;UBERON:0004786!8.93e-12!13;UBERON:0003350!1.61e-08!9;UBERON:0004808!1.61e-08!9;UBERON:0001277!1.61e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.04e-32,31;UBERON:0005409,5.06e-31,47;UBERON:0000344,8.79e-21,15;UBERON:0001007,2.23e-18,116;UBERON:0001555,2.23e-18,116;UBERON:0007026,2.23e-18,116;UBERON:0001242,2.25e-18,13;UBERON:0001262,2.25e-18,13;UBERON:0004786,2.25e-18,13;UBERON:0004119,8.21e-18,118;UBERON:0000925,8.21e-18,118;UBERON:0006595,8.21e-18,118;UBERON:0004921,1.12e-16,114;UBERON:0003350,5.14e-13,9;UBERON:0004808,5.14e-13,9;UBERON:0001277,5.14e-13,9;UBERON:0004923,4.09e-11,24;UBERON:0000485,3.53e-10,11 | |||
|phase1_expression=0,15.0059425284925,13.6499771816861,19.660173734944,17.5313505481222,12.255186849568,10.9797941079897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4393635146462,9.1763712426868,10.3361753540704,15.0766698655676,13.574687659211,25.6531616266105,15.6258680451157,17.9601713630797,0,0,0,11.8429164098023,13.4650062740379,12.6585000882669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,6.88339101585109,0.679971333707751,6.47643829965381,12.9955283489534,10.3046184032387,2.66844398250329,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0,5.36664234679582,0,0,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0.376999773989026,0,0,0,0,0,0,16.775258509631,0,0,10.9846533739694,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.420883711772948,0.130120442962704,0.229902104433473,0,0.30140963567143,0,0.12811372028485,0,0,0.215567992932842,0.189106080167819,0.351902248327898,0.657587197282725,1.94633074457919,4.179025998266,3.08673204611915,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,9.91256348951394,8.19796756656987,0,0,2.57734922644187,4.63872106633688,5.11469500843202,7.03834816616469,8.54152310780121,4.44687177754829,6.28338022000674,5.57078121715222,4.09424582950152,8.98819408654222,8.42938394511308,8.56307474993779,0,0.228497025219458,0,0.610953983535943,0.387904974335251,0.140271639780637,0.632365371242573,0.590440591918409,0.627994911365499,0.493588655687202,9.48648406678877,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0.648540907100142,1.37280706594041,0,0,0,2.02063102357689,4.4849353380478,13.9908621195376,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0.491589944147214,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,1.32745138339963,0,0,0.188605079755898,0,0.922305443831782,1.29214146584111,0,0,0,1.05418608574999,1.03135543248187,0,0,0.129358683782755,0,0,0,0,0,0,0,0,6.92522262354216,3.55221738730992,2.77439454669517,3.10368094408155,4.43180429311665,6.41257840585672,0,0,0.412773735926445,0,0,0,0,0,0,0,2.86401185404534,0,0,1.83609079397062,4.39085421630384,4.80397640241591,3.10187996685088,2.89287095038676,2.09404753587224,16.8499465279331,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0.358053391334963,0,0,0.147689527174577,0,0.228620419965,0.201652370273681,0.0974578807397524,0.0962118416403295,0.350630706544707,5.44152920676507,0,0,0,1.35232715822533,3.56596703357246,0.73260649706906,8.1459984050045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,1.52087579934144,0.188626341386076,0.561849044819294,0.320125762024346,0.574354689556133,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,1.1921809497366,0.581385666529314,0.941093804153306,0.676916863133412,1.09756783723664,0.526139422875686,0.543216455383447,0,0.355905054372522,0.788035859004508,0.409231043169689,0.77468420592983,0.771626443924566,0.749431733813838,0.935726433781634,1.07435527024149,1.3390183244819,1.10295709559758,0 | |phase1_expression=0,15.0059425284925,13.6499771816861,19.660173734944,17.5313505481222,12.255186849568,10.9797941079897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4393635146462,9.1763712426868,10.3361753540704,15.0766698655676,13.574687659211,25.6531616266105,15.6258680451157,17.9601713630797,0,0,0,11.8429164098023,13.4650062740379,12.6585000882669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,6.88339101585109,0.679971333707751,6.47643829965381,12.9955283489534,10.3046184032387,2.66844398250329,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0,5.36664234679582,0,0,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0.376999773989026,0,0,0,0,0,0,16.775258509631,0,0,10.9846533739694,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.420883711772948,0.130120442962704,0.229902104433473,0,0.30140963567143,0,0.12811372028485,0,0,0.215567992932842,0.189106080167819,0.351902248327898,0.657587197282725,1.94633074457919,4.179025998266,3.08673204611915,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,9.91256348951394,8.19796756656987,0,0,2.57734922644187,4.63872106633688,5.11469500843202,7.03834816616469,8.54152310780121,4.44687177754829,6.28338022000674,5.57078121715222,4.09424582950152,8.98819408654222,8.42938394511308,8.56307474993779,0,0.228497025219458,0,0.610953983535943,0.387904974335251,0.140271639780637,0.632365371242573,0.590440591918409,0.627994911365499,0.493588655687202,9.48648406678877,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0.648540907100142,1.37280706594041,0,0,0,2.02063102357689,4.4849353380478,13.9908621195376,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0.491589944147214,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,1.32745138339963,0,0,0.188605079755898,0,0.922305443831782,1.29214146584111,0,0,0,1.05418608574999,1.03135543248187,0,0,0.129358683782755,0,0,0,0,0,0,0,0,6.92522262354216,3.55221738730992,2.77439454669517,3.10368094408155,4.43180429311665,6.41257840585672,0,0,0.412773735926445,0,0,0,0,0,0,0,2.86401185404534,0,0,1.83609079397062,4.39085421630384,4.80397640241591,3.10187996685088,2.89287095038676,2.09404753587224,16.8499465279331,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0.358053391334963,0,0,0.147689527174577,0,0.228620419965,0.201652370273681,0.0974578807397524,0.0962118416403295,0.350630706544707,5.44152920676507,0,0,0,1.35232715822533,3.56596703357246,0.73260649706906,8.1459984050045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,1.52087579934144,0.188626341386076,0.561849044819294,0.320125762024346,0.574354689556133,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,1.1921809497366,0.581385666529314,0.941093804153306,0.676916863133412,1.09756783723664,0.526139422875686,0.543216455383447,0,0.355905054372522,0.788035859004508,0.409231043169689,0.77468420592983,0.771626443924566,0.749431733813838,0.935726433781634,1.07435527024149,1.3390183244819,1.10295709559758,0 | ||
|short_description=p2@Ggt6 | |||
}} | }} |
Latest revision as of 15:32, 25 September 2015
Short description: | p2@Ggt6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ggt6_5end |
Coexpression cluster: | MCL_coexpression_mm9:395 |
Association with transcript: | 0bp_to_ENSMUST00000076443, NM_027819, uc007jyw.1, uc007jyx.1_5end |
EntrezGene: | Ggt6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.14e-13 | 9 |
epithelial cell of alimentary canal | 5.14e-13 | 9 |
epithelial cell | 1.87e-11 | 25 |
endodermal cell | 1.23e-09 | 20 |
brush border epithelial cell | 2.46e-09 | 6 |
gut absorptive cell | 2.46e-09 | 6 |
enterocyte | 2.46e-09 | 6 |
columnar/cuboidal epithelial cell | 8.18e-08 | 7 |
endo-epithelial cell | 8.22e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.04e-32 | 31 |
gastrointestinal system | 5.06e-31 | 47 |
mucosa | 8.79e-21 | 15 |
digestive system | 2.23e-18 | 116 |
digestive tract | 2.23e-18 | 116 |
primitive gut | 2.23e-18 | 116 |
intestinal mucosa | 2.25e-18 | 13 |
wall of intestine | 2.25e-18 | 13 |
gastrointestinal system mucosa | 2.25e-18 | 13 |
endoderm-derived structure | 8.21e-18 | 118 |
endoderm | 8.21e-18 | 118 |
presumptive endoderm | 8.21e-18 | 118 |
subdivision of digestive tract | 1.12e-16 | 114 |
epithelium of mucosa | 5.14e-13 | 9 |
gastrointestinal system epithelium | 5.14e-13 | 9 |
intestinal epithelium | 5.14e-13 | 9 |
organ component layer | 4.09e-11 | 24 |
simple columnar epithelium | 3.53e-10 | 11 |