FFCP PHASE1:Hg19::chr10:123845284..123845296,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:123845284..123845296,+ | |||
|coexpression_cluster_id=C1302 | |coexpression_cluster_id=C1302 | ||
|description=CAGE_peak_at_chr10:123845284..123845296,+ | |description=CAGE_peak_at_chr10:123845284..123845296,+ |
Latest revision as of 11:09, 23 July 2015
Short description: | p@chr10:123845284..123845296, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:123845284..123845296, + |
Coexpression cluster: | C1302_keratoacanthoma_cervical_immature_salivary_malignant_oral_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr10:123845284..123845296+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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acinar cell | 2.87e-27 | 5 |
acinar cell of salivary gland | 2.91e-26 | 3 |
epithelial cell of alimentary canal | 6.97e-26 | 20 |
protein secreting cell | 8.92e-23 | 6 |
endo-epithelial cell | 3.33e-22 | 42 |
endodermal cell | 1.37e-15 | 58 |
glandular epithelial cell | 2.86e-15 | 9 |
stratified squamous epithelial cell | 5.99e-13 | 6 |
keratin accumulating cell | 5.99e-13 | 6 |
stratified epithelial cell | 5.99e-13 | 6 |
Showing 1 to 10 of 25 entries
Ontology term | p-value | n |
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oral opening | 4.57e-18 | 22 |
mouth | 1.52e-17 | 29 |
stomodeum | 1.52e-17 | 29 |
mouth mucosa | 5.78e-16 | 13 |
saliva-secreting gland | 1.95e-13 | 6 |
gland of oral region | 1.95e-13 | 6 |
gland of foregut | 1.95e-13 | 6 |
oral gland | 1.95e-13 | 6 |
oral cavity | 1.95e-13 | 6 |
subdivision of head | 1.51e-12 | 49 |
Showing 1 to 10 of 24 entries
Ontology term | p-value | n |
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skin squamous cell carcinoma | 3.74e-10 | 1 |
keratoacanthoma | 3.74e-10 | 1 |
squamous cell carcinoma | 8.42e-10 | 14 |
Showing 1 to 3 of 3 entries