FFCP PHASE1:Mm9::chr18:24364438..24364503,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:24364438..24364503,+
|short_description=p1@Galnt1
|description=CAGE_peak_1_at_Galnt1_5end
|association_with_transcript=0bp_to_ENSMUST00000164998,NM_001160...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14423 | |EntrezGene=14423 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=562 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q0U0,O08912,Q3UFE4 | |UniProt=E9Q0U0,O08912,Q3UFE4 | ||
|association_with_transcript=0bp_to_ENSMUST00000164998,NM_001160404,uc008egr.2_5end | |||
|cluster_id=chr18:24364438..24364503,+ | |||
|description=CAGE_peak_1_at_Galnt1_5end | |||
|id=chr18:24364438..24364503,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.98e-13!59;UBERON:0000160!1.76e-12!43;UBERON:0004119!3.07e-09!130;UBERON:0000925!3.07e-09!130;UBERON:0006595!3.07e-09!130;UBERON:0004923!5.36e-09!24;UBERON:0001007!9.01e-09!128;UBERON:0001555!9.01e-09!128;UBERON:0007026!9.01e-09!128;UBERON:0004921!3.74e-08!126;UBERON:0004185!3.74e-08!126;UBERON:0000466!8.65e-08!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.89e-11,47;UBERON:0000160,8.04e-11,31;UBERON:0004923,5.36e-09,24;UBERON:0004119,3.06e-07,118;UBERON:0000925,3.06e-07,118;UBERON:0006595,3.06e-07,118;UBERON:0001007,7.90e-07,116;UBERON:0001555,7.90e-07,116;UBERON:0007026,7.90e-07,116 | |||
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| ||
|short_description=p1@Galnt1 | |||
}} | }} |
Latest revision as of 02:50, 27 September 2015
Short description: | p1@Galnt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Galnt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:562 |
Association with transcript: | 0bp_to_ENSMUST00000164998, NM_001160404, uc008egr.2_5end |
EntrezGene: | Galnt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.89e-11 | 47 |
intestine | 8.04e-11 | 31 |
organ component layer | 5.36e-09 | 24 |
endoderm-derived structure | 3.06e-07 | 118 |
endoderm | 3.06e-07 | 118 |
presumptive endoderm | 3.06e-07 | 118 |
digestive system | 7.90e-07 | 116 |
digestive tract | 7.90e-07 | 116 |
primitive gut | 7.90e-07 | 116 |