FFCP PHASE1:Mm9::chr19:12576303..12576312,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:12576303..12576312,-
|short_description=p7@Dtx4
|description=CAGE_peak_7_at_Dtx4_5end
|association_with_transcript=173bp_to_ENSMUST00000045521,NM_172442,u...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=207521 | |EntrezGene=207521 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q6PDK8 | |UniProt=Q6PDK8 | ||
|association_with_transcript=173bp_to_ENSMUST00000045521,NM_172442,uc008guc.2_5end | |||
|cluster_id=chr19:12576303..12576312,- | |||
|description=CAGE_peak_7_at_Dtx4_5end | |||
|id=chr19:12576303..12576312,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,1.33e-08,3;CL:0002540,1.33e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.51e-13,9;UBERON:0000019,1.51e-13,9;UBERON:0000047,1.51e-13,9;UBERON:0010312,1.51e-13,9;UBERON:0004088,1.51e-13,9;UBERON:0002104,1.51e-13,9;UBERON:0001456,1.51e-13,9;UBERON:0003072,1.51e-13,9;UBERON:0004128,1.51e-13,9;UBERON:0003071,1.51e-13,9;UBERON:0001444,6.80e-11,11;UBERON:0000020,6.74e-10,12;UBERON:0001032,6.74e-10,12;UBERON:0004456,6.74e-10,12;UBERON:0000033,4.68e-09,13;UBERON:0005085,4.68e-09,13;UBERON:0003056,1.84e-08,49 | |||
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0.523523743973798,0,0,0.971020706062307,0.125896817975577,0,0.367093504323363,0,0.65407546914134,1.09843091367236,0.388859798148567,0,0,0,0,0,0,1.43266719969378,0,1.41621522601718,0,0,0.338844532069132,0.889294796111139,1.3498495759221,2.96659908770092,1.4209602298922,1.19840044207362,1.15265491596466,0,0.135005938331691,0.210324961351382,0.571301968807607,0.441737081903227,0.122490799214954,0,0,1.10115880999389,0,0.153606533256243,0.923204014111357,0.365950574409639,1.56274011167028,0.279182999001381,1.12552522006336,0.30559649555362,0,0.569486723196412,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0.253359865475099,0,0.34255163915718,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0.376999773989026,0.247194967734374,0,0.884610551949874,0.161766849947409,0.220841518460394,0,1.86391761218122,0,0,0,0.11981512450592,0,0.381210681219194,0,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0,0.407357455401265,0.248813941220186,0,0.420883711772948,1.43132487258974,2.06911893990126,1.44049703844279,1.65775299619287,1.15662048557257,1.5373646434182,1.40552586839593,0.517406741478031,0,0,0.175951124163949,0.43839146485515,0,0.348252166522167,0.411564272815887,0.398068533636986,1.40442637462647,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,1.05144974282064,0.514523061896422,0.330418782983798,0.793351699990633,1.70630600428187,1.39342003116263,0.515469845288373,0.403367049246685,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0,1.79763881730844,0.648414149624083,0.597423819763102,0,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0.295220295959204,0.156998727841375,0.493588655687202,0,0.166845105716094,0.393117990226406,0,0,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0.179397413521912,0,0,0,0.325929952884052,0,0,0.502518772325447,0.238043640886014,0.780534591431195,0.315270288212382,0.221464689648775,0.637819074629948,0.163863314715738,0.172684981865896,0.578596234326046,0,1.08781136763742,0,0,0,0.234423373184406,0.163934945376675,0,0.315508219416257,1.17131623288992,0.215423397732799,0.238968797952552,0.891194696329576,0,0.809621403349789,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0.35613120733451,0.162886959353576,0.659880491890142,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,1.03135543248187,0,0.720244376125241,0.388076051348264,0.214337035031592,0.177340233642274,0.356737635204141,0,0.608929898229199,0.23467170806371,0,0,0,0.161464426695906,0.180938774784468,0,0,0.582961673259701,0.556275906031529,0.170870880797853,0.412773735926445,0,0.188368457004691,0.27338845544205,0,0.169978429993855,0,0,0,0.949007980743406,0.203319467126849,0.540026704109006,0.209088296014469,0,0.134864346384821,0.165306911450672,0.523511883968059,0.259229946583586,0,0,0.897099276263873,1.65458490457098,0.972255941720238,0.516639293910924,0.675824501963113,0.821500670520278,2.0832701575032,0.943734099831398,0.483168241652012,0.864090018773596,0.316011120628178,0,0.102710957164827,0.389762468933385,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0.772758376128762,0.375364950902364,0.183151624267265,0,0,1.6942555278512,0.920650473014354,0,1.20297227640581,0,0,1.35004500046361,2.2516060161211,0,0,3.73634451303036,1.19707462020309,0.682934423016537,0,0,0.367687016900028,0.44449345560323,0.412070114477788,0,0.505394423527595,0.25347929989024,0.565879024158229,0.468207537349412,0.512201219238954,0.459483751644906,0,0.811190281613988,0.578727661391115,0.412085900803307,0.588795680537589,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0,0,0.135804113845862,0.561142271657738,0.949080144993393,0.197008964751127,0.818462086339379,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0.523523743973798,0,0,0.971020706062307,0.125896817975577,0,0.367093504323363,0,0.65407546914134,1.09843091367236,0.388859798148567,0,0,0,0,0,0,1.43266719969378,0,1.41621522601718,0,0,0.338844532069132,0.889294796111139,1.3498495759221,2.96659908770092,1.4209602298922,1.19840044207362,1.15265491596466,0,0.135005938331691,0.210324961351382,0.571301968807607,0.441737081903227,0.122490799214954,0,0,1.10115880999389,0,0.153606533256243,0.923204014111357,0.365950574409639,1.56274011167028,0.279182999001381,1.12552522006336,0.30559649555362,0,0.569486723196412,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0.253359865475099,0,0.34255163915718,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0.376999773989026,0.247194967734374,0,0.884610551949874,0.161766849947409,0.220841518460394,0,1.86391761218122,0,0,0,0.11981512450592,0,0.381210681219194,0,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0,0.407357455401265,0.248813941220186,0,0.420883711772948,1.43132487258974,2.06911893990126,1.44049703844279,1.65775299619287,1.15662048557257,1.5373646434182,1.40552586839593,0.517406741478031,0,0,0.175951124163949,0.43839146485515,0,0.348252166522167,0.411564272815887,0.398068533636986,1.40442637462647,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,1.05144974282064,0.514523061896422,0.330418782983798,0.793351699990633,1.70630600428187,1.39342003116263,0.515469845288373,0.403367049246685,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0,1.79763881730844,0.648414149624083,0.597423819763102,0,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0.295220295959204,0.156998727841375,0.493588655687202,0,0.166845105716094,0.393117990226406,0,0,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0.179397413521912,0,0,0,0.325929952884052,0,0,0.502518772325447,0.238043640886014,0.780534591431195,0.315270288212382,0.221464689648775,0.637819074629948,0.163863314715738,0.172684981865896,0.578596234326046,0,1.08781136763742,0,0,0,0.234423373184406,0.163934945376675,0,0.315508219416257,1.17131623288992,0.215423397732799,0.238968797952552,0.891194696329576,0,0.809621403349789,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0.35613120733451,0.162886959353576,0.659880491890142,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,1.03135543248187,0,0.720244376125241,0.388076051348264,0.214337035031592,0.177340233642274,0.356737635204141,0,0.608929898229199,0.23467170806371,0,0,0,0.161464426695906,0.180938774784468,0,0,0.582961673259701,0.556275906031529,0.170870880797853,0.412773735926445,0,0.188368457004691,0.27338845544205,0,0.169978429993855,0,0,0,0.949007980743406,0.203319467126849,0.540026704109006,0.209088296014469,0,0.134864346384821,0.165306911450672,0.523511883968059,0.259229946583586,0,0,0.897099276263873,1.65458490457098,0.972255941720238,0.516639293910924,0.675824501963113,0.821500670520278,2.0832701575032,0.943734099831398,0.483168241652012,0.864090018773596,0.316011120628178,0,0.102710957164827,0.389762468933385,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0.772758376128762,0.375364950902364,0.183151624267265,0,0,1.6942555278512,0.920650473014354,0,1.20297227640581,0,0,1.35004500046361,2.2516060161211,0,0,3.73634451303036,1.19707462020309,0.682934423016537,0,0,0.367687016900028,0.44449345560323,0.412070114477788,0,0.505394423527595,0.25347929989024,0.565879024158229,0.468207537349412,0.512201219238954,0.459483751644906,0,0.811190281613988,0.578727661391115,0.412085900803307,0.588795680537589,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0,0,0.135804113845862,0.561142271657738,0.949080144993393,0.197008964751127,0.818462086339379,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p7@Dtx4 | |||
}} | }} |
Latest revision as of 22:27, 1 October 2015
Short description: | p7@Dtx4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Dtx4_5end |
Coexpression cluster: | NA |
Association with transcript: | 173bp_to_ENSMUST00000045521, NM_172442, uc008guc.2_5end |
EntrezGene: | Dtx4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 1.33e-08 | 3 |
mesenchymal stem cell of the bone marrow | 1.33e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 1.51e-13 | 9 |
camera-type eye | 1.51e-13 | 9 |
simple eye | 1.51e-13 | 9 |
immature eye | 1.51e-13 | 9 |
ocular region | 1.51e-13 | 9 |
visual system | 1.51e-13 | 9 |
face | 1.51e-13 | 9 |
optic cup | 1.51e-13 | 9 |
optic vesicle | 1.51e-13 | 9 |
eye primordium | 1.51e-13 | 9 |
subdivision of head | 6.80e-11 | 11 |
sense organ | 6.74e-10 | 12 |
sensory system | 6.74e-10 | 12 |
entire sense organ system | 6.74e-10 | 12 |
head | 4.68e-09 | 13 |
ectodermal placode | 4.68e-09 | 13 |
pre-chordal neural plate | 1.84e-08 | 49 |