FFCP PHASE1:Mm9::chr19:56623043..56623062,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:56623043..56623062,+
|short_description=p6@Nhlrc2
|description=CAGE_peak_6_at_Nhlrc2_5end
|association_with_transcript=292bp_to_ENSMUST00000071423,ENSMUST...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66866 | |EntrezGene=66866 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BZW8,F6ZR71,B2RR26 | |UniProt=Q8BZW8,F6ZR71,B2RR26 | ||
|association_with_transcript=292bp_to_ENSMUST00000071423,ENSMUST00000165411,NM_025811,uc008hzc.1_5end | |||
|cluster_id=chr19:56623043..56623062,+ | |||
|description=CAGE_peak_6_at_Nhlrc2_5end | |||
|id=chr19:56623043..56623062,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.41e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.04e-11,25;CL:0000223,6.99e-08,20;CL:0002563,8.59e-08,9;CL:0002251,8.59e-08,9;CL:0000075,4.95e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.28e-07!15;UBERON:0000485!8.09e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,1.58e-08,11;UBERON:0000344,1.69e-08,15;UBERON:0000160,4.86e-08,31;UBERON:0003350,8.59e-08,9;UBERON:0004808,8.59e-08,9;UBERON:0001277,8.59e-08,9;UBERON:0001007,2.31e-07,116;UBERON:0001555,2.31e-07,116;UBERON:0007026,2.31e-07,116;UBERON:0004119,2.44e-07,118;UBERON:0000925,2.44e-07,118;UBERON:0006595,2.44e-07,118;UBERON:0001242,5.09e-07,13;UBERON:0001262,5.09e-07,13;UBERON:0004786,5.09e-07,13;UBERON:0005409,8.41e-07,47 | |||
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| ||
|short_description=p6@Nhlrc2 | |||
}} | }} |
Latest revision as of 00:16, 26 September 2015
Short description: | p6@Nhlrc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Nhlrc2_5end |
Coexpression cluster: | NA |
Association with transcript: | 292bp_to_ENSMUST00000071423, ENSMUST00000165411, NM_025811, uc008hzc.1_5end |
EntrezGene: | Nhlrc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.04e-11 | 25 |
endodermal cell | 6.99e-08 | 20 |
intestinal epithelial cell | 8.59e-08 | 9 |
epithelial cell of alimentary canal | 8.59e-08 | 9 |
columnar/cuboidal epithelial cell | 4.95e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 1.58e-08 | 11 |
mucosa | 1.69e-08 | 15 |
intestine | 4.86e-08 | 31 |
epithelium of mucosa | 8.59e-08 | 9 |
gastrointestinal system epithelium | 8.59e-08 | 9 |
intestinal epithelium | 8.59e-08 | 9 |
digestive system | 2.31e-07 | 116 |
digestive tract | 2.31e-07 | 116 |
primitive gut | 2.31e-07 | 116 |
endoderm-derived structure | 2.44e-07 | 118 |
endoderm | 2.44e-07 | 118 |
presumptive endoderm | 2.44e-07 | 118 |
intestinal mucosa | 5.09e-07 | 13 |
wall of intestine | 5.09e-07 | 13 |
gastrointestinal system mucosa | 5.09e-07 | 13 |
gastrointestinal system | 8.41e-07 | 47 |