FFCP PHASE1:Mm9::chr19:56623122..56623174,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:56623122..56623174,+
|short_description=p2@Nhlrc2
|description=CAGE_peak_2_at_Nhlrc2_5end
|association_with_transcript=371bp_to_ENSMUST00000071423,NM_0258...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66866 | |EntrezGene=66866 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BZW8,B2RR26 | |UniProt=Q8BZW8,B2RR26 | ||
|association_with_transcript=371bp_to_ENSMUST00000071423,NM_025811,uc008hzc.1_5end | |||
|cluster_id=chr19:56623122..56623174,+ | |||
|description=CAGE_peak_2_at_Nhlrc2_5end | |||
|id=chr19:56623122..56623174,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.98e-12!25;CL:0000223!9.10e-11!20;CL:0002076!6.54e-09!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.85e-12,25;CL:0000223,8.93e-11,20;CL:0002076,6.44e-09,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.68e-14!130;UBERON:0000925!2.68e-14!130;UBERON:0006595!2.68e-14!130;UBERON:0000160!4.82e-14!43;UBERON:0001007!1.05e-13!128;UBERON:0001555!1.05e-13!128;UBERON:0007026!1.05e-13!128;UBERON:0004921!1.09e-12!126;UBERON:0004185!1.09e-12!126;UBERON:0005409!1.37e-12!59;UBERON:0000344!5.56e-10!15;UBERON:0001242!9.75e-09!13;UBERON:0000060!9.75e-09!13;UBERON:0001262!9.75e-09!13;UBERON:0004786!9.75e-09!13;UBERON:0003914!1.79e-08!47;UBERON:0005256!1.62e-07!47;UBERON:0004923!4.48e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.96e-14,31;UBERON:0004119,7.57e-13,118;UBERON:0000925,7.57e-13,118;UBERON:0006595,7.57e-13,118;UBERON:0001007,2.75e-12,116;UBERON:0001555,2.75e-12,116;UBERON:0007026,2.75e-12,116;UBERON:0005409,4.71e-12,47;UBERON:0004921,2.57e-11,114;UBERON:0000344,5.46e-10,15;UBERON:0001242,9.61e-09,13;UBERON:0001262,9.61e-09,13;UBERON:0004786,9.61e-09,13;UBERON:0003914,1.77e-08,47;UBERON:0002100,5.68e-08,90;UBERON:0005256,9.79e-08,45;UBERON:0004923,4.43e-07,24 | |||
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| ||
|short_description=p2@Nhlrc2 | |||
}} | }} |
Latest revision as of 00:17, 26 September 2015
Short description: | p2@Nhlrc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nhlrc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 371bp_to_ENSMUST00000071423, NM_025811, uc008hzc.1_5end |
EntrezGene: | Nhlrc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.85e-12 | 25 |
endodermal cell | 8.93e-11 | 20 |
endo-epithelial cell | 6.44e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.96e-14 | 31 |
endoderm-derived structure | 7.57e-13 | 118 |
endoderm | 7.57e-13 | 118 |
presumptive endoderm | 7.57e-13 | 118 |
digestive system | 2.75e-12 | 116 |
digestive tract | 2.75e-12 | 116 |
primitive gut | 2.75e-12 | 116 |
gastrointestinal system | 4.71e-12 | 47 |
subdivision of digestive tract | 2.57e-11 | 114 |
mucosa | 5.46e-10 | 15 |
intestinal mucosa | 9.61e-09 | 13 |
wall of intestine | 9.61e-09 | 13 |
gastrointestinal system mucosa | 9.61e-09 | 13 |
epithelial tube | 1.77e-08 | 47 |
trunk | 5.68e-08 | 90 |
trunk mesenchyme | 9.79e-08 | 45 |
organ component layer | 4.43e-07 | 24 |