FFCP PHASE1:Mm9::chr1:166179183..166179227,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:166179183..166179227,+
|short_description=p1@Slc19a2
|description=CAGE_peak_1_at_Slc19a2_5end
|association_with_transcript=0bp_to_ENSMUST00000159230,NM_054...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=116914 | |EntrezGene=116914 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8R4Y1,Q9EQN9 | |UniProt=Q8R4Y1,Q9EQN9 | ||
|association_with_transcript=0bp_to_ENSMUST00000159230,NM_054087,uc007did.1,uc007die.1_5end | |||
|cluster_id=chr1:166179183..166179227,+ | |||
|description=CAGE_peak_1_at_Slc19a2_5end | |||
|id=chr1:166179183..166179227,+ | |||
|ontology_enrichment_celltype=CL:0000223!6.55e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,6.55e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.70e-10!22;UBERON:0007499!6.70e-10!22;UBERON:0006925!6.70e-10!22;UBERON:0009497!6.70e-10!22;UBERON:0000015!6.70e-10!22;UBERON:0002423!6.70e-10!22;UBERON:0006235!6.70e-10!22;UBERON:0008835!6.70e-10!22;UBERON:0003894!6.70e-10!22;UBERON:0004161!6.70e-10!22;UBERON:0008836!6.70e-10!22;UBERON:0005256!3.47e-09!47;UBERON:0009854!4.27e-09!23;UBERON:0009856!4.27e-09!23;UBERON:0002365!2.80e-07!25;UBERON:0002330!2.80e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,6.28e-10,45;UBERON:0002107,6.70e-10,22;UBERON:0007499,6.70e-10,22;UBERON:0006925,6.70e-10,22;UBERON:0009497,6.70e-10,22;UBERON:0000015,6.70e-10,22;UBERON:0002423,6.70e-10,22;UBERON:0006235,6.70e-10,22;UBERON:0008835,6.70e-10,22;UBERON:0003894,6.70e-10,22;UBERON:0004161,6.70e-10,22;UBERON:0008836,6.70e-10,22;UBERON:0009854,4.27e-09,23;UBERON:0009856,4.27e-09,23;UBERON:0002365,2.80e-07,25;UBERON:0002330,2.80e-07,25 | |||
|phase1_expression=5.76535849577258,5.23463111459042,6.82498859084304,20.5675663688644,27.0483694171027,6.04365378882803,4.90586545250604,2.84071311571468,12.5301962714983,12.6394844213876,13.1837835533639,13.4814948702119,1.71200729931206,2.09808965805594,5.66286595086627,5.06188168474565,10.4934281719222,1.57731082679119,1.7824876368746,3.81950686618227,5.6128571499706,3.97163804803541,3.39559725880616,6.71968175732308,6.8822784320151,6.89078356938024,4.73838195774982,3.23206849028834,5.32065574477847,3.78045194639896,2.88249663851896,31.1165029995219,23.9875267157982,0,21.086168241843,22.4416771233965,25.7253388890585,2.51118978442145,1.5626706890476,2.09409497589519,0.588231488031014,2.04913645487534,0.485510353031154,30.970617221992,31.2240948156105,21.4749700029167,20.342174953049,3.2703773457067,5.71184075109627,11.0825042472342,18.1982348112971,11.5002051491977,4.69791296961662,5.07753499407941,6.04968838456435,17.2363822144084,12.0344044774278,35.5813743671435,1.21389876515759,2.64495489636016,1.26766280701236,31.5125414824293,29.3467282716676,9.89889689009539,17.7995945262055,2.1314403448383,12.8828047522914,5.76327457982332,2.17748185847803,1.89008313664367,1.89292465216244,4.85606673486466,4.19650227808066,1.71487118900936,0.766763768145891,1.83843757322004,4.40463523997555,7.15049093277051,6.91229399653096,1.71452174049252,1.73826522844578,2.6045668527838,5.02529398202486,7.87867654044352,6.87592114995646,3.24091444021034,4.9830088279686,2.05039390407831,11.8890123533099,10.202160614416,9.56552812715537,10.3250865237766,53.0377640292045,30.2233787317178,18.8435161059824,23.7454250161588,5.05599912474307,6.64678258054425,5.19572009205738,4.94675404314476,2.53518155598025,7.69958864485907,12.7402619853323,7.11066703153331,15.3708639117962,13.4280728701802,18.1988800205322,9.7056297761201,1.29468941823586,17.0708459924548,4.68410382268567,5.1759131313064,6.6878494204257,10.0984169170257,10.2302175208063,12.0639927676488,15.8204779349999,3.90418263683761,7.07688441559899,2.10296904931632,3.3126227769059,2.42437626567611,3.72783522436244,4.39171195517321,6.0739544975902,9.45191104271788,5.15205035375457,2.39961092397363,3.68503658511888,6.29120685500255,5.94750783664214,0.753926112677186,6.08385120672968,5.37002460393694,6.44142938134636,5.02947915510049,6.00852246716866,4.10543003013307,8.08712826987759,7.99679052368601,3.3831315170303,3.90833577536904,4.68161537493908,4.21973489940002,3.87808045162569,3.07472928683639,2.99845518591132,4.65666067330228,2.15567992932842,2.08016688184601,2.81521798662318,3.72632745126877,3.61461423993277,15.3230953269753,21.812906459242,2.9855140022774,4.21327912387941,3.08817488537658,5.39910648851626,3.72826390563903,4.69052119962192,4.50155153652537,4.02466050494857,4.32881309844288,4.62801338662135,3.95307706075693,3.75582761959467,4.32031766758527,2.63295759861569,4.43252153013557,5.83695428730161,5.11699955988663,5.26920276698522,5.09984391289413,5.88811855979556,3.80747065803352,13.5471701023357,10.3135720998782,3.41261200856374,4.18026009348789,5.28356591420583,2.62188582010345,3.7804267453628,7.03834816616469,7.11793592316767,6.25856027951241,4.52403375840485,6.76452004939913,5.45899443933536,6.29173586057955,4.97117514711797,9.95706366271836,4.36236172192088,4.56994050438915,1.1270773567308,4.68398054044223,4.26695471768777,4.76923575254166,4.11037491307672,3.54264355151045,5.18095801876537,4.07210640941942,23.7162101669719,8.5091003915208,11.2038627214526,11.2431056192427,12.9830477688642,7.95884627182976,8.40265310878685,7.19240343627027,22.698931748505,22.5140358814227,23.0029130443767,22.7005978077787,34.9482193888308,43.4435670069032,18.6573310062789,31.8412724099822,4.24932337383191,3.60033682363921,4.07412441105065,3.22515662972857,4.45911471748154,2.34508760418542,3.33261097240419,4.29294025287157,2.20689201748667,2.43611158613652,2.87018583583477,3.4411296090305,3.28101465545202,4.77341893318988,4.52373851817817,4.89515115436839,2.95058563811422,1.93155722413313,7.70642831941401,10.5490517932983,13.7705354116407,4.03953483526997,16.7219356290616,15.2271110275689,10.3403230911743,23.4189421993501,19.6062833192507,19.8153571552183,22.2645885921192,24.2572362066389,20.5549644532192,4.81981974632711,6.95506417520516,5.69809931735217,8.47012188638596,5.93892442701128,33.1862845849907,8.74010290157933,9.06970670894253,15.6542216197395,11.2214719294694,12.2974059177571,22.7416897988035,9.08834323693764,9.62542921638748,24.9669038769295,45.3300016872495,44.3482835967203,4.08527526904546,3.24109969256358,2.58717367565509,3.21505552547388,4.07882537377229,3.21063871683727,3.29098041204242,5.48036908406279,11.7335854031855,18.0057260234247,7.49796553386871,14.3451040059088,19.6986600569005,9.95163261314572,10.0272768962635,8.69946768648825,7.57850175237612,10.5692422145991,3.75915937755276,4.12773735926445,3.70389054739423,4.1441060541032,5.05768642567793,2.97411625168479,4.07948231985253,6.71766971153558,6.90999869022119,11.4560474161814,3.32152793260192,6.91286188231286,7.77638453916969,11.0816796887668,12.4466661335321,14.0258920240214,13.5551667389551,16.4906243449939,3.49960427887841,3.72803587852155,3.38215763210514,3.13984746692355,3.97100377097034,3.30567020184881,5.16639293910924,4.05494701177868,6.68936260280798,9.63512447845231,14.4705895307481,8.21386010808421,6.62469014393091,1.26404448251271,2.43270258348197,1.23253148597793,1.29920822977795,1.79026695667481,1.78813219303138,1.56254084375959,1.47689527174577,1.31256384932592,0.838274873204998,2.11734988787365,1.36441033035653,1.82802499116626,1.63627663054197,13.8305534005279,29.0801598920025,34.0912655116008,32.9053848073594,5.02292944483695,12.1993609043268,6.95976172215607,9.86094543763703,6.01886524842436,2.25900737046827,4.14292712856459,3.43737308063638,4.98374228796694,5.48066015816514,6.0431511791176,0.675022500231806,4.05289082901798,7.25027854374727,3.62432218226274,1.764384908931,1.19707462020309,3.92687293234509,4.37592090722929,3.5634237646757,4.04455718590031,4.22268782823069,4.12070114477788,4.81378814387723,6.31743029409494,4.30914809813408,5.28153755881013,5.99305647807247,5.37811280200902,4.47996657853783,6.19181798667996,6.95305955669133,5.59436739344745,3.29668720642645,5.15196220470391,6.51451579532289,6.21165321557681,4.5302876089991,6.97662799835177,5.55245344450451,5.83840794452568,4.75612729469209,6.05060336307039,4.88894809845102,5.05028044491965,4.98267076121531,4.0386837773981,7.36615877705441,4.95797891795091,11.3814900478873,9.99242311751784,7.95367468714389,10.5286816483666,6.50380329034067,4.19123696327079,3.2461496986859 | |phase1_expression=5.76535849577258,5.23463111459042,6.82498859084304,20.5675663688644,27.0483694171027,6.04365378882803,4.90586545250604,2.84071311571468,12.5301962714983,12.6394844213876,13.1837835533639,13.4814948702119,1.71200729931206,2.09808965805594,5.66286595086627,5.06188168474565,10.4934281719222,1.57731082679119,1.7824876368746,3.81950686618227,5.6128571499706,3.97163804803541,3.39559725880616,6.71968175732308,6.8822784320151,6.89078356938024,4.73838195774982,3.23206849028834,5.32065574477847,3.78045194639896,2.88249663851896,31.1165029995219,23.9875267157982,0,21.086168241843,22.4416771233965,25.7253388890585,2.51118978442145,1.5626706890476,2.09409497589519,0.588231488031014,2.04913645487534,0.485510353031154,30.970617221992,31.2240948156105,21.4749700029167,20.342174953049,3.2703773457067,5.71184075109627,11.0825042472342,18.1982348112971,11.5002051491977,4.69791296961662,5.07753499407941,6.04968838456435,17.2363822144084,12.0344044774278,35.5813743671435,1.21389876515759,2.64495489636016,1.26766280701236,31.5125414824293,29.3467282716676,9.89889689009539,17.7995945262055,2.1314403448383,12.8828047522914,5.76327457982332,2.17748185847803,1.89008313664367,1.89292465216244,4.85606673486466,4.19650227808066,1.71487118900936,0.766763768145891,1.83843757322004,4.40463523997555,7.15049093277051,6.91229399653096,1.71452174049252,1.73826522844578,2.6045668527838,5.02529398202486,7.87867654044352,6.87592114995646,3.24091444021034,4.9830088279686,2.05039390407831,11.8890123533099,10.202160614416,9.56552812715537,10.3250865237766,53.0377640292045,30.2233787317178,18.8435161059824,23.7454250161588,5.05599912474307,6.64678258054425,5.19572009205738,4.94675404314476,2.53518155598025,7.69958864485907,12.7402619853323,7.11066703153331,15.3708639117962,13.4280728701802,18.1988800205322,9.7056297761201,1.29468941823586,17.0708459924548,4.68410382268567,5.1759131313064,6.6878494204257,10.0984169170257,10.2302175208063,12.0639927676488,15.8204779349999,3.90418263683761,7.07688441559899,2.10296904931632,3.3126227769059,2.42437626567611,3.72783522436244,4.39171195517321,6.0739544975902,9.45191104271788,5.15205035375457,2.39961092397363,3.68503658511888,6.29120685500255,5.94750783664214,0.753926112677186,6.08385120672968,5.37002460393694,6.44142938134636,5.02947915510049,6.00852246716866,4.10543003013307,8.08712826987759,7.99679052368601,3.3831315170303,3.90833577536904,4.68161537493908,4.21973489940002,3.87808045162569,3.07472928683639,2.99845518591132,4.65666067330228,2.15567992932842,2.08016688184601,2.81521798662318,3.72632745126877,3.61461423993277,15.3230953269753,21.812906459242,2.9855140022774,4.21327912387941,3.08817488537658,5.39910648851626,3.72826390563903,4.69052119962192,4.50155153652537,4.02466050494857,4.32881309844288,4.62801338662135,3.95307706075693,3.75582761959467,4.32031766758527,2.63295759861569,4.43252153013557,5.83695428730161,5.11699955988663,5.26920276698522,5.09984391289413,5.88811855979556,3.80747065803352,13.5471701023357,10.3135720998782,3.41261200856374,4.18026009348789,5.28356591420583,2.62188582010345,3.7804267453628,7.03834816616469,7.11793592316767,6.25856027951241,4.52403375840485,6.76452004939913,5.45899443933536,6.29173586057955,4.97117514711797,9.95706366271836,4.36236172192088,4.56994050438915,1.1270773567308,4.68398054044223,4.26695471768777,4.76923575254166,4.11037491307672,3.54264355151045,5.18095801876537,4.07210640941942,23.7162101669719,8.5091003915208,11.2038627214526,11.2431056192427,12.9830477688642,7.95884627182976,8.40265310878685,7.19240343627027,22.698931748505,22.5140358814227,23.0029130443767,22.7005978077787,34.9482193888308,43.4435670069032,18.6573310062789,31.8412724099822,4.24932337383191,3.60033682363921,4.07412441105065,3.22515662972857,4.45911471748154,2.34508760418542,3.33261097240419,4.29294025287157,2.20689201748667,2.43611158613652,2.87018583583477,3.4411296090305,3.28101465545202,4.77341893318988,4.52373851817817,4.89515115436839,2.95058563811422,1.93155722413313,7.70642831941401,10.5490517932983,13.7705354116407,4.03953483526997,16.7219356290616,15.2271110275689,10.3403230911743,23.4189421993501,19.6062833192507,19.8153571552183,22.2645885921192,24.2572362066389,20.5549644532192,4.81981974632711,6.95506417520516,5.69809931735217,8.47012188638596,5.93892442701128,33.1862845849907,8.74010290157933,9.06970670894253,15.6542216197395,11.2214719294694,12.2974059177571,22.7416897988035,9.08834323693764,9.62542921638748,24.9669038769295,45.3300016872495,44.3482835967203,4.08527526904546,3.24109969256358,2.58717367565509,3.21505552547388,4.07882537377229,3.21063871683727,3.29098041204242,5.48036908406279,11.7335854031855,18.0057260234247,7.49796553386871,14.3451040059088,19.6986600569005,9.95163261314572,10.0272768962635,8.69946768648825,7.57850175237612,10.5692422145991,3.75915937755276,4.12773735926445,3.70389054739423,4.1441060541032,5.05768642567793,2.97411625168479,4.07948231985253,6.71766971153558,6.90999869022119,11.4560474161814,3.32152793260192,6.91286188231286,7.77638453916969,11.0816796887668,12.4466661335321,14.0258920240214,13.5551667389551,16.4906243449939,3.49960427887841,3.72803587852155,3.38215763210514,3.13984746692355,3.97100377097034,3.30567020184881,5.16639293910924,4.05494701177868,6.68936260280798,9.63512447845231,14.4705895307481,8.21386010808421,6.62469014393091,1.26404448251271,2.43270258348197,1.23253148597793,1.29920822977795,1.79026695667481,1.78813219303138,1.56254084375959,1.47689527174577,1.31256384932592,0.838274873204998,2.11734988787365,1.36441033035653,1.82802499116626,1.63627663054197,13.8305534005279,29.0801598920025,34.0912655116008,32.9053848073594,5.02292944483695,12.1993609043268,6.95976172215607,9.86094543763703,6.01886524842436,2.25900737046827,4.14292712856459,3.43737308063638,4.98374228796694,5.48066015816514,6.0431511791176,0.675022500231806,4.05289082901798,7.25027854374727,3.62432218226274,1.764384908931,1.19707462020309,3.92687293234509,4.37592090722929,3.5634237646757,4.04455718590031,4.22268782823069,4.12070114477788,4.81378814387723,6.31743029409494,4.30914809813408,5.28153755881013,5.99305647807247,5.37811280200902,4.47996657853783,6.19181798667996,6.95305955669133,5.59436739344745,3.29668720642645,5.15196220470391,6.51451579532289,6.21165321557681,4.5302876089991,6.97662799835177,5.55245344450451,5.83840794452568,4.75612729469209,6.05060336307039,4.88894809845102,5.05028044491965,4.98267076121531,4.0386837773981,7.36615877705441,4.95797891795091,11.3814900478873,9.99242311751784,7.95367468714389,10.5286816483666,6.50380329034067,4.19123696327079,3.2461496986859 | ||
|short_description=p1@Slc19a2 | |||
}} | }} |
Latest revision as of 16:52, 26 September 2015
Short description: | p1@Slc19a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc19a2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000159230, NM_054087, uc007did.1, uc007die.1_5end |
EntrezGene: | Slc19a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 6.55e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 6.28e-10 | 45 |
liver | 6.70e-10 | 22 |
epithelial sac | 6.70e-10 | 22 |
digestive gland | 6.70e-10 | 22 |
epithelium of foregut-midgut junction | 6.70e-10 | 22 |
anatomical boundary | 6.70e-10 | 22 |
hepatobiliary system | 6.70e-10 | 22 |
foregut-midgut junction | 6.70e-10 | 22 |
hepatic diverticulum | 6.70e-10 | 22 |
liver primordium | 6.70e-10 | 22 |
septum transversum | 6.70e-10 | 22 |
liver bud | 6.70e-10 | 22 |
digestive tract diverticulum | 4.27e-09 | 23 |
sac | 4.27e-09 | 23 |
exocrine gland | 2.80e-07 | 25 |
exocrine system | 2.80e-07 | 25 |