FFCP PHASE1:Mm9::chr2:32627479..32627494,-: Difference between revisions
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|id=chr2:32627479..32627494,-
|short_description=p@chr2:32627479..32627494,-
|description=CAGE_peak_at_chr2:32627479..32627494,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:32627479..32627494,- | |||
|description=CAGE_peak_at_chr2:32627479..32627494,- | |||
|id=chr2:32627479..32627494,- | |||
|ontology_enrichment_celltype=CL:0000239!2.07e-21!6;CL:0000677!2.07e-21!6;CL:0000212!2.07e-21!6;CL:0000584!2.07e-21!6;CL:0000075!2.84e-18!7;CL:0002563!4.37e-14!9;CL:0002251!4.37e-14!9;CL:0000473!4.65e-12!3;CL:0000627!4.65e-12!3;CL:0000682!4.65e-12!3;CL:0000066!1.60e-10!25;CL:0002076!3.30e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.47e-25,3;CL:0000239,7.27e-22,6;CL:0000677,7.27e-22,6;CL:0000584,7.27e-22,6;CL:0000075,8.38e-19,7;CL:0000066,1.41e-15,25;CL:0002563,1.04e-14,9;CL:0002251,1.04e-14,9;CL:0000473,3.93e-11,7;CL:0002076,5.96e-09,15;CL:0000223,8.99e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.55e-22!15;UBERON:0000160!1.17e-17!43;UBERON:0001242!1.17e-16!13;UBERON:0000060!1.17e-16!13;UBERON:0001262!1.17e-16!13;UBERON:0004786!1.17e-16!13;UBERON:0004923!3.59e-16!24;UBERON:0003350!4.37e-14!9;UBERON:0004808!4.37e-14!9;UBERON:0001277!4.37e-14!9;UBERON:0005409!1.12e-13!59;UBERON:0000485!2.04e-11!11;UBERON:0001962!2.09e-08!2;UBERON:0001961!2.09e-08!2;UBERON:0001744!2.09e-08!2;UBERON:0001007!5.08e-08!128;UBERON:0001555!5.08e-08!128;UBERON:0007026!5.08e-08!128;UBERON:0004119!7.79e-08!130;UBERON:0000925!7.79e-08!130;UBERON:0006595!7.79e-08!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.02e-25,15;UBERON:0001962,6.88e-17,2;UBERON:0001961,6.88e-17,2;UBERON:0001744,6.88e-17,2;UBERON:0004923,5.52e-16,24;UBERON:0001242,1.80e-15,13;UBERON:0001262,1.80e-15,13;UBERON:0004786,1.80e-15,13;UBERON:0003350,1.04e-14,9;UBERON:0004808,1.04e-14,9;UBERON:0001277,1.04e-14,9;UBERON:0000485,4.24e-12,11;UBERON:0002465,1.37e-11,3;UBERON:0003199,3.04e-09,1;UBERON:0000160,4.56e-09,31 | |||
|phase1_expression=0,18.4956966048861,14.1049764210756,0.60492842261366,0.500895729946347,3.02182689441402,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95976510659561,4.35877634027623,8.03924749761028,8.18447792702242,9.69620547086501,0,0,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.32225283331772,0,0,0,0.201683524623343,0.22237804384487,0,0.949058123089023,0,0,0,0,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,18.4956966048861,14.1049764210756,0.60492842261366,0.500895729946347,3.02182689441402,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95976510659561,4.35877634027623,8.03924749761028,8.18447792702242,9.69620547086501,0,0,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.32225283331772,0,0,0,0.201683524623343,0.22237804384487,0,0.949058123089023,0,0,0,0,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:32627479..32627494,- | |||
}} | }} |
Latest revision as of 01:48, 5 August 2015
Short description: | p@chr2:32627479..32627494, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:32627479..32627494, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.47e-25 | 3 |
brush border epithelial cell | 7.27e-22 | 6 |
gut absorptive cell | 7.27e-22 | 6 |
enterocyte | 7.27e-22 | 6 |
columnar/cuboidal epithelial cell | 8.38e-19 | 7 |
epithelial cell | 1.41e-15 | 25 |
intestinal epithelial cell | 1.04e-14 | 9 |
epithelial cell of alimentary canal | 1.04e-14 | 9 |
defensive cell | 3.93e-11 | 7 |
endo-epithelial cell | 5.96e-09 | 15 |
endodermal cell | 8.99e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.02e-25 | 15 |
gut-associated lymphoid tissue | 6.88e-17 | 2 |
mucosa-associated lymphoid tissue | 6.88e-17 | 2 |
lymphoid tissue | 6.88e-17 | 2 |
organ component layer | 5.52e-16 | 24 |
intestinal mucosa | 1.80e-15 | 13 |
wall of intestine | 1.80e-15 | 13 |
gastrointestinal system mucosa | 1.80e-15 | 13 |
epithelium of mucosa | 1.04e-14 | 9 |
gastrointestinal system epithelium | 1.04e-14 | 9 |
intestinal epithelium | 1.04e-14 | 9 |
simple columnar epithelium | 4.24e-12 | 11 |
lymphoid system | 1.37e-11 | 3 |
egg chamber | 3.04e-09 | 1 |
intestine | 4.56e-09 | 31 |