FFCP PHASE1:Mm9::chr3:34057648..34057650,+: Difference between revisions
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|id=chr3:34057648..34057650,+
|short_description=p@chr3:34057648..34057650,+
|description=CAGE_peak_at_chr3:34057648..34057650,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1128 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:34057648..34057650,+ | |||
|description=CAGE_peak_at_chr3:34057648..34057650,+ | |||
|id=chr3:34057648..34057650,+ | |||
|ontology_enrichment_celltype=CL:0000063!6.62e-12!66;CL:0000893!3.61e-11!6;CL:0002489!3.61e-11!6;CL:0000898!3.61e-11!6;CL:0000809!3.61e-11!6;CL:0000810!3.61e-11!6;CL:0000895!3.61e-11!6;CL:0000808!3.61e-11!6;CL:0000894!3.61e-11!6;CL:0000806!3.61e-11!6;CL:0000807!3.61e-11!6;CL:0000805!3.61e-11!6;CL:0002425!3.61e-11!6;CL:0002436!3.61e-11!6;CL:0002427!3.61e-11!6;CL:0002428!3.61e-11!6;CL:0002429!3.61e-11!6;CL:0002433!3.61e-11!6;CL:0002431!3.61e-11!6;CL:0002432!3.61e-11!6;CL:0000215!6.97e-09!3;CL:0000219!9.52e-09!54;CL:0000548!1.70e-08!115;CL:0000004!1.70e-08!115;CL:0000255!1.70e-08!115;CL:0000084!2.15e-08!11;CL:0000827!2.15e-08!11;CL:0000624!2.60e-08!8;CL:0002371!3.72e-08!118;CL:0002320!6.57e-08!46;CL:0000134!6.57e-08!46;CL:0000144!7.83e-08!121;CL:0000012!7.83e-08!121;CL:0000838!1.21e-07!12;CL:0000791!2.34e-07!9;CL:0000789!2.34e-07!9;CL:0002420!2.34e-07!9;CL:0002419!2.34e-07!9;CL:0000790!2.34e-07!9;CL:0000738!3.97e-07!17;CL:0002087!3.97e-07!17;CL:0000542!5.20e-07!13;CL:0000051!5.20e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.08e-12,6;CL:0000677,1.08e-12,6;CL:0000584,1.08e-12,6;CL:0000075,4.98e-11,7;CL:0002563,8.40e-09,9;CL:0002251,8.40e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.57e-08!46;UBERON:0001962!1.81e-07!2;UBERON:0001961!1.81e-07!2;UBERON:0001744!1.81e-07!2;UBERON:0003929!3.66e-07!55;UBERON:0000344!5.22e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,9.52e-36,2;UBERON:0001961,9.52e-36,2;UBERON:0001744,9.52e-36,2;UBERON:0000344,1.68e-29,15;UBERON:0002465,2.99e-24,3;UBERON:0004923,9.72e-19,24;UBERON:0003199,1.74e-18,1;UBERON:0001242,7.96e-13,13;UBERON:0001262,7.96e-13,13;UBERON:0004786,7.96e-13,13;UBERON:0003350,8.40e-09,9;UBERON:0004808,8.40e-09,9;UBERON:0001277,8.40e-09,9;UBERON:0000485,2.24e-07,11;UBERON:0000331,5.46e-07,3;UBERON:0002116,5.46e-07,3;UBERON:0001204,5.46e-07,3;UBERON:0001168,5.46e-07,3 | |||
|phase1_expression=0,0,0,0.30246421130683,3.50627010962443,0,3.97141489012394,0,0.140788722151667,0.234064526321993,0.34243593645101,0.319088635981346,0.171200729931206,0,0,0.404950534779652,0,0,0,0,0,0,0.261199789138935,5.59973479776923,2.2940928106717,0,0,0.430942465371778,2.28028103347649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.302286240427142,0.289864488701678,0.860423876981386,0,0,0,0.448026887097336,0,0,0.779358013808606,0.35333957451034,0,0,0,0,0,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.358855426437903,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0.30246421130683,3.50627010962443,0,3.97141489012394,0,0.140788722151667,0.234064526321993,0.34243593645101,0.319088635981346,0.171200729931206,0,0,0.404950534779652,0,0,0,0,0,0,0.261199789138935,5.59973479776923,2.2940928106717,0,0,0.430942465371778,2.28028103347649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.302286240427142,0.289864488701678,0.860423876981386,0,0,0,0.448026887097336,0,0,0.779358013808606,0.35333957451034,0,0,0,0,0,0.253359865475099,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.358855426437903,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:34057648..34057650,+ | |||
}} | }} |
Latest revision as of 09:43, 6 August 2015
Short description: | p@chr3:34057648..34057650, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:34057648..34057650, + |
Coexpression cluster: | MCL_coexpression_mm9:1128 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.08e-12 | 6 |
gut absorptive cell | 1.08e-12 | 6 |
enterocyte | 1.08e-12 | 6 |
columnar/cuboidal epithelial cell | 4.98e-11 | 7 |
intestinal epithelial cell | 8.40e-09 | 9 |
epithelial cell of alimentary canal | 8.40e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 9.52e-36 | 2 |
mucosa-associated lymphoid tissue | 9.52e-36 | 2 |
lymphoid tissue | 9.52e-36 | 2 |
mucosa | 1.68e-29 | 15 |
lymphoid system | 2.99e-24 | 3 |
organ component layer | 9.72e-19 | 24 |
egg chamber | 1.74e-18 | 1 |
intestinal mucosa | 7.96e-13 | 13 |
wall of intestine | 7.96e-13 | 13 |
gastrointestinal system mucosa | 7.96e-13 | 13 |
epithelium of mucosa | 8.40e-09 | 9 |
gastrointestinal system epithelium | 8.40e-09 | 9 |
intestinal epithelium | 8.40e-09 | 9 |
simple columnar epithelium | 2.24e-07 | 11 |
ileal mucosa | 5.46e-07 | 3 |
ileum | 5.46e-07 | 3 |
mucosa of small intestine | 5.46e-07 | 3 |
wall of small intestine | 5.46e-07 | 3 |