FFCP PHASE1:Mm9::chr3:90193806..90193846,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:90193806..90193846,-
|short_description=p2@Slc27a3
|description=CAGE_peak_2_at_Slc27a3_5end
|association_with_transcript=2bp_to_ENSMUST00000029541,NM_01198...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=26568 | |EntrezGene=26568 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=G3X8Y7,O88561,B2RUG3 | |UniProt=G3X8Y7,O88561,B2RUG3 | ||
|association_with_transcript=2bp_to_ENSMUST00000029541,NM_011988,uc008qcc.2,uc012csx.1_5end | |||
|cluster_id=chr3:90193806..90193846,- | |||
|description=CAGE_peak_2_at_Slc27a3_5end | |||
|id=chr3:90193806..90193846,- | |||
|ontology_enrichment_celltype=CL:0000540!3.10e-10!33;CL:0000047!3.10e-10!33;CL:0000031!3.10e-10!33;CL:0000404!3.10e-10!33;CL:0000117!1.29e-09!23;CL:0000337!1.29e-09!23;CL:0002319!6.87e-09!43;CL:0000221!8.80e-09!44;CL:0000133!8.80e-09!44;CL:0000393!9.61e-07!39;CL:0000211!9.61e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.05e-10,23;CL:0000337,1.05e-10,23;CL:0000540,1.70e-10,33;CL:0000047,1.70e-10,33;CL:0000031,1.70e-10,33;CL:0000404,1.70e-10,33;CL:0002319,7.76e-09,43;CL:0000221,2.41e-08,44;CL:0000133,2.41e-08,44;CL:0000393,4.06e-07,39;CL:0000211,4.06e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.86e-11!102;UBERON:0000924!4.86e-11!102;UBERON:0006601!4.86e-11!102;UBERON:0002346!2.05e-08!71;UBERON:0003075!2.05e-08!71;UBERON:0007284!2.05e-08!71;UBERON:0000468!2.45e-08!333;UBERON:0001017!3.37e-07!73;UBERON:0005743!3.37e-07!73;UBERON:0000922!8.01e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.00e-07,95;UBERON:0000924,8.00e-07,95;UBERON:0006601,8.00e-07,95 | |||
|phase1_expression=3.04282809499109,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.159992422793407,0,0,0.430761996159075,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0.202753862439029,0,3.9119567217402,0.65407546914134,1.09843091367236,0.194429899074283,2.2397827460058,2.87505128729943,0,0,0,0.257259436035947,0.286533439938757,0,5.86717736492834,8.46385566835253,4.43681982454325,3.04960078862219,2.66788438833342,0.899899717281399,0.988866362566974,0,1.49800055259202,0.384218305321555,2.59224030771194,1.89008313664367,2.94454945891935,8.56952953211411,5.52171352379034,3.42974237801871,2.97120960156533,5.51531271966013,0,0.766124028511126,1.84327839907492,7.25374582516066,6.67859798297591,7.29278718779464,1.11673199600552,4.50210088025344,1.68078072554491,6.18720029494702,5.12538050876771,7.82877672466262,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,1.08245520505607,0.253359865475099,1.01104889002957,0.11418387971906,0.258937883647172,8.75808620482466,3.64319186208885,4.56698217468212,5.76538743140146,6.17962826265753,3.52766121407114,10.4303270803631,0.247194967734374,0.578397427679647,0.884610551949874,2.75003644910596,0.441683036920787,0,0,0,0.209446706813455,0,0.11981512450592,0,0.127070227073065,1.49790639404823,0,9.5497307605777,0.695297280769106,1.02286182932132,1.0389402227978,1.46017136760982,2.34230536855727,0.248813941220186,0.252722758433675,0.210441855886474,1.43132487258974,2.75882525320168,2.16074555766419,2.71268672104287,1.36072998302656,0.896796041993948,1.68663104207512,0.517406741478031,1.72454394346274,4.53854592402766,4.39877810409872,6.1374805079721,4.44875598760957,3.1342694986995,4.52720700097476,1.99034266818493,0,0.257347907114715,0,0.828503090142008,0.938104239924385,1.80062061461015,1.18372367792605,0.590292695242212,0.925602677324269,0.232533944750408,1.07309360559848,0.116765342367169,0.822799249567402,0.32833492815819,0.243206428637567,0.292399974850665,0.658650345873152,0.536825675041487,0.841159794256509,3.49875682089567,0,0,2.34617075588757,1.16118335930219,1.67527699718721,0.80673409849337,0.667134131534611,0.570676878337677,0,0.329397909448022,0.251335208800269,0.596869416123452,0.974820435595601,0,0.432276099749388,0,2.0863469104839,1.25673363870702,2.25415471346161,0.814605311381257,0.581857461502877,0.631222379012867,1.51767689098217,0.442830443938806,1.41298855057237,0.123397163921801,0,0.333690211432188,0.196558995113203,0.674586337154561,0.811440485554012,0.72353147925725,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,1.47802552133284,1.32643988239339,1.95557971730431,1.86719594352707,1.87752198630802,2.34508760418542,2.38043640886014,1.56106918286239,2.04925687338048,1.32878813789265,2.07291199254733,1.47476983244164,0.863424909329478,0.578596234326046,0,0,0.983528546038072,1.10374698521893,0.80275294993896,1.52375192569864,0,1.26235463602186,0.94652465824877,1.56175497718655,1.29254038639679,1.19484398976276,1.78238939265915,0.849229592366497,1.61924280669958,2.92255857911312,1.97643888973262,0.642642632843614,1.56134093729095,2.67098405500883,1.95464351224291,1.48473110675282,1.32745138339963,2.42780636154981,1.81394134178851,0.943025398779491,0.295301892880773,1.22974059177571,0.258428293168221,1.81766864738753,0,0.316036757935816,1.05418608574999,0,1.02131881726136,2.88097750450096,2.45781499187234,2.14337035031592,1.41872186913819,2.67553226403106,1.97458824722545,1.522324745573,1.40803024838226,2.96564899209348,0.220528398054962,2.63818004706368,1.13025098687134,2.71408162176701,3.22305328808468,3.28281799490123,0,0.741701208042039,0,2.06386867963222,0.370389054739423,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0,0,2.68885594543965,2.43983360552218,1.40406943068342,1.04544148007234,1.31017538247707,1.48350781023303,1.07449492442937,0.523511883968059,0.129614973291793,0,0.56369293868419,2.39226473670366,3.64008679005615,4.083474955225,3.22899558694328,3.54807863530634,3.87278887530988,4.4269490846943,2.20204623293993,1.20792060413003,1.72818003754719,0.316011120628178,2.02725215290164,1.64337531463724,1.16928740680016,0.358053391334963,0.198681354781265,0.240390899039938,0,0.302899349844443,0.381034033274999,0.100826185136841,0,0.0962118416403295,0.350630706544707,1.81384306892169,1.33191572024439,1.25599399253266,1.84673078000486,0.386379188064381,0.563047426353546,1.83151624267265,4.07299920250225,0.501572104035363,1.12950368523413,0.460325236507177,1.71868654031819,0.343706364687375,0,0,0,0.45032120322422,0,0,1.03787347584177,3.59122386060928,2.39027048055788,1.94485373654635,1.46729213839588,1.2869045591501,0.888986911206461,1.23621034343337,1.28367683836726,2.52697211763797,1.77435509923168,2.45214243801899,2.43467919421694,2.30490548657529,1.83793500657962,2.38146845641537,2.89710814862139,1.73618298417335,1.23625770240992,1.17759136107518,0.342869252385415,2.66213709239006,1.66905332963125,1.74415699958794,1.50575008664529,2.28459441307527,0.914639864363863,2.36762740294059,1.49384525230448,0,2.25406534435931,1.77308068276014,2.04615521584845,1.85924209423159,3.2794123866794,5.74564329257276,3.04111090979031,1.50409737833809,1.3390183244819,1.76473135295612,0.463735671240843 | |phase1_expression=3.04282809499109,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.159992422793407,0,0,0.430761996159075,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0.202753862439029,0,3.9119567217402,0.65407546914134,1.09843091367236,0.194429899074283,2.2397827460058,2.87505128729943,0,0,0,0.257259436035947,0.286533439938757,0,5.86717736492834,8.46385566835253,4.43681982454325,3.04960078862219,2.66788438833342,0.899899717281399,0.988866362566974,0,1.49800055259202,0.384218305321555,2.59224030771194,1.89008313664367,2.94454945891935,8.56952953211411,5.52171352379034,3.42974237801871,2.97120960156533,5.51531271966013,0,0.766124028511126,1.84327839907492,7.25374582516066,6.67859798297591,7.29278718779464,1.11673199600552,4.50210088025344,1.68078072554491,6.18720029494702,5.12538050876771,7.82877672466262,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,1.08245520505607,0.253359865475099,1.01104889002957,0.11418387971906,0.258937883647172,8.75808620482466,3.64319186208885,4.56698217468212,5.76538743140146,6.17962826265753,3.52766121407114,10.4303270803631,0.247194967734374,0.578397427679647,0.884610551949874,2.75003644910596,0.441683036920787,0,0,0,0.209446706813455,0,0.11981512450592,0,0.127070227073065,1.49790639404823,0,9.5497307605777,0.695297280769106,1.02286182932132,1.0389402227978,1.46017136760982,2.34230536855727,0.248813941220186,0.252722758433675,0.210441855886474,1.43132487258974,2.75882525320168,2.16074555766419,2.71268672104287,1.36072998302656,0.896796041993948,1.68663104207512,0.517406741478031,1.72454394346274,4.53854592402766,4.39877810409872,6.1374805079721,4.44875598760957,3.1342694986995,4.52720700097476,1.99034266818493,0,0.257347907114715,0,0.828503090142008,0.938104239924385,1.80062061461015,1.18372367792605,0.590292695242212,0.925602677324269,0.232533944750408,1.07309360559848,0.116765342367169,0.822799249567402,0.32833492815819,0.243206428637567,0.292399974850665,0.658650345873152,0.536825675041487,0.841159794256509,3.49875682089567,0,0,2.34617075588757,1.16118335930219,1.67527699718721,0.80673409849337,0.667134131534611,0.570676878337677,0,0.329397909448022,0.251335208800269,0.596869416123452,0.974820435595601,0,0.432276099749388,0,2.0863469104839,1.25673363870702,2.25415471346161,0.814605311381257,0.581857461502877,0.631222379012867,1.51767689098217,0.442830443938806,1.41298855057237,0.123397163921801,0,0.333690211432188,0.196558995113203,0.674586337154561,0.811440485554012,0.72353147925725,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,1.47802552133284,1.32643988239339,1.95557971730431,1.86719594352707,1.87752198630802,2.34508760418542,2.38043640886014,1.56106918286239,2.04925687338048,1.32878813789265,2.07291199254733,1.47476983244164,0.863424909329478,0.578596234326046,0,0,0.983528546038072,1.10374698521893,0.80275294993896,1.52375192569864,0,1.26235463602186,0.94652465824877,1.56175497718655,1.29254038639679,1.19484398976276,1.78238939265915,0.849229592366497,1.61924280669958,2.92255857911312,1.97643888973262,0.642642632843614,1.56134093729095,2.67098405500883,1.95464351224291,1.48473110675282,1.32745138339963,2.42780636154981,1.81394134178851,0.943025398779491,0.295301892880773,1.22974059177571,0.258428293168221,1.81766864738753,0,0.316036757935816,1.05418608574999,0,1.02131881726136,2.88097750450096,2.45781499187234,2.14337035031592,1.41872186913819,2.67553226403106,1.97458824722545,1.522324745573,1.40803024838226,2.96564899209348,0.220528398054962,2.63818004706368,1.13025098687134,2.71408162176701,3.22305328808468,3.28281799490123,0,0.741701208042039,0,2.06386867963222,0.370389054739423,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0,0,2.68885594543965,2.43983360552218,1.40406943068342,1.04544148007234,1.31017538247707,1.48350781023303,1.07449492442937,0.523511883968059,0.129614973291793,0,0.56369293868419,2.39226473670366,3.64008679005615,4.083474955225,3.22899558694328,3.54807863530634,3.87278887530988,4.4269490846943,2.20204623293993,1.20792060413003,1.72818003754719,0.316011120628178,2.02725215290164,1.64337531463724,1.16928740680016,0.358053391334963,0.198681354781265,0.240390899039938,0,0.302899349844443,0.381034033274999,0.100826185136841,0,0.0962118416403295,0.350630706544707,1.81384306892169,1.33191572024439,1.25599399253266,1.84673078000486,0.386379188064381,0.563047426353546,1.83151624267265,4.07299920250225,0.501572104035363,1.12950368523413,0.460325236507177,1.71868654031819,0.343706364687375,0,0,0,0.45032120322422,0,0,1.03787347584177,3.59122386060928,2.39027048055788,1.94485373654635,1.46729213839588,1.2869045591501,0.888986911206461,1.23621034343337,1.28367683836726,2.52697211763797,1.77435509923168,2.45214243801899,2.43467919421694,2.30490548657529,1.83793500657962,2.38146845641537,2.89710814862139,1.73618298417335,1.23625770240992,1.17759136107518,0.342869252385415,2.66213709239006,1.66905332963125,1.74415699958794,1.50575008664529,2.28459441307527,0.914639864363863,2.36762740294059,1.49384525230448,0,2.25406534435931,1.77308068276014,2.04615521584845,1.85924209423159,3.2794123866794,5.74564329257276,3.04111090979031,1.50409737833809,1.3390183244819,1.76473135295612,0.463735671240843 | ||
|short_description=p2@Slc27a3 | |||
}} | }} |
Latest revision as of 21:15, 25 September 2015
Short description: | p2@Slc27a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc27a3_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENSMUST00000029541, NM_011988, uc008qcc.2, uc012csx.1_5end |
EntrezGene: | Slc27a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.05e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.05e-10 | 23 |
neuron | 1.70e-10 | 33 |
neuronal stem cell | 1.70e-10 | 33 |
neuroblast | 1.70e-10 | 33 |
electrically signaling cell | 1.70e-10 | 33 |
neural cell | 7.76e-09 | 43 |
ectodermal cell | 2.41e-08 | 44 |
neurectodermal cell | 2.41e-08 | 44 |
electrically responsive cell | 4.06e-07 | 39 |
electrically active cell | 4.06e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 8.00e-07 | 95 |
ectoderm | 8.00e-07 | 95 |
presumptive ectoderm | 8.00e-07 | 95 |