Personal tools

FFCP PHASE1:Mm9::chr4:126885535..126885547,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr4:126885535..126885547,+ |short_description=p@chr4:126885535..126885547,+ |description=CAGE_peak_at_chr4:126885535..126885547,+ |association_with_transcript=...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:126885535..126885547,+
|DHSsupport=NA
|short_description=p@chr4:126885535..126885547,+
|DPIdataset=NA
|description=CAGE_peak_at_chr4:126885535..126885547,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=135
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr4:126885535..126885547,+
|description=CAGE_peak_at_chr4:126885535..126885547,+
|id=chr4:126885535..126885547,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002021!1.12e-32!10;UBERON:0000411!1.12e-32!10;UBERON:0001950!1.12e-32!10;UBERON:0002619!5.42e-22!17;UBERON:0000956!2.20e-17!21;UBERON:0001869!2.20e-17!21;UBERON:0000203!2.20e-17!21;UBERON:0002791!9.87e-17!29;UBERON:0003528!9.87e-17!29;UBERON:0001893!9.87e-17!29;UBERON:0002780!5.75e-16!39;UBERON:0001890!5.75e-16!39;UBERON:0006240!5.75e-16!39;UBERON:0000955!1.62e-15!50;UBERON:0006238!1.62e-15!50;UBERON:0003080!1.73e-15!40;UBERON:0002616!6.19e-14!49;UBERON:0002020!7.12e-14!34;UBERON:0003056!7.92e-14!49;UBERON:0000033!4.03e-13!63;UBERON:0001049!7.32e-13!52;UBERON:0005068!7.32e-13!52;UBERON:0006241!7.32e-13!52;UBERON:0007135!7.32e-13!52;UBERON:0001017!7.98e-11!73;UBERON:0005743!7.98e-11!73;UBERON:0000073!1.96e-10!75;UBERON:0001016!1.96e-10!75;UBERON:0002346!9.13e-10!71;UBERON:0003075!9.13e-10!71;UBERON:0007284!9.13e-10!71;UBERON:0007811!1.34e-08!86;UBERON:0004121!1.27e-07!102;UBERON:0000924!1.27e-07!102;UBERON:0006601!1.27e-07!102;UBERON:0000153!1.51e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.70e-79,10;UBERON:0000411,4.70e-79,10;UBERON:0001950,4.70e-79,10;UBERON:0002619,2.27e-46,17;UBERON:0000956,1.84e-37,21;UBERON:0001869,1.84e-37,21;UBERON:0000203,1.84e-37,21;UBERON:0003528,5.34e-27,29;UBERON:0002791,5.34e-27,29;UBERON:0001893,5.34e-27,29;UBERON:0002020,5.96e-23,34;UBERON:0002780,6.16e-20,39;UBERON:0001890,6.16e-20,39;UBERON:0006240,6.16e-20,39;UBERON:0003080,2.01e-19,40;UBERON:0000073,2.98e-17,54;UBERON:0002616,8.22e-17,46;UBERON:0000955,1.93e-16,47;UBERON:0006238,1.93e-16,47;UBERON:0003056,9.62e-16,49;UBERON:0001049,8.49e-15,52;UBERON:0005068,8.49e-15,52;UBERON:0006241,8.49e-15,52;UBERON:0007135,8.49e-15,52;UBERON:0001017,1.39e-12,73;UBERON:0001016,3.15e-12,75;UBERON:0002346,6.80e-12,64;UBERON:0003075,6.80e-12,64;UBERON:0007284,6.80e-12,64;UBERON:0010371,2.45e-10,73;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0010314,4.89e-08,92
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0.486723789203273,0,0,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,1.14579102687879,5.84300819968538,1.37016503954128,1.5107877947794,2.02506750069542,2.2516060161211,1.81256963593682,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0.486723789203273,0,0,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,1.14579102687879,5.84300819968538,1.37016503954128,1.5107877947794,2.02506750069542,2.2516060161211,1.81256963593682,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0,0,0,0
|short_description=p@chr4:126885535..126885547,+
}}
}}

Latest revision as of 18:43, 4 August 2015

Short description:p@chr4:126885535..126885547, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:126885535..126885547, +
Coexpression cluster:MCL_coexpression_mm9:135
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
1
2
3
4
5
6




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data