FFCP PHASE1:Mm9::chr4:41688151..41688173,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:41688151..41688173,-
|short_description=p2@Sigmar1
|description=CAGE_peak_2_at_Sigmar1_5end
|association_with_transcript=12bp_to_NM_011014,uc008sjk.1,uc008...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18391 | |EntrezGene=18391 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=A2AMS1,O55242,A2AMS0,B7ZJH9 | |UniProt=A2AMS1,O55242,A2AMS0,B7ZJH9 | ||
|association_with_transcript=12bp_to_NM_011014,uc008sjk.1,uc008sjl.1,uc012dcg.1_5end | |||
|cluster_id=chr4:41688151..41688173,- | |||
|description=CAGE_peak_2_at_Sigmar1_5end | |||
|id=chr4:41688151..41688173,- | |||
|ontology_enrichment_celltype=CL:0000219!1.79e-09!54;CL:0002320!8.61e-07!46;CL:0000134!8.61e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.79e-09,54;CL:0002320,8.61e-07,46;CL:0000134,8.61e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!8.78e-12!23;UBERON:0009856!8.78e-12!23;UBERON:0002107!2.87e-11!22;UBERON:0007499!2.87e-11!22;UBERON:0006925!2.87e-11!22;UBERON:0009497!2.87e-11!22;UBERON:0000015!2.87e-11!22;UBERON:0002423!2.87e-11!22;UBERON:0006235!2.87e-11!22;UBERON:0008835!2.87e-11!22;UBERON:0003894!2.87e-11!22;UBERON:0004161!2.87e-11!22;UBERON:0008836!2.87e-11!22;UBERON:0002365!5.15e-11!25;UBERON:0002330!5.15e-11!25;UBERON:0005256!2.24e-09!47;UBERON:0002384!8.61e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,8.78e-12,23;UBERON:0009856,8.78e-12,23;UBERON:0002107,2.87e-11,22;UBERON:0007499,2.87e-11,22;UBERON:0006925,2.87e-11,22;UBERON:0009497,2.87e-11,22;UBERON:0000015,2.87e-11,22;UBERON:0002423,2.87e-11,22;UBERON:0006235,2.87e-11,22;UBERON:0008835,2.87e-11,22;UBERON:0003894,2.87e-11,22;UBERON:0004161,2.87e-11,22;UBERON:0008836,2.87e-11,22;UBERON:0002365,5.15e-11,25;UBERON:0002330,5.15e-11,25;UBERON:0005256,2.70e-10,45;UBERON:0002384,8.61e-07,46 | |||
|phase1_expression=11.5307169915452,6.97950815278722,3.18499467572675,3.32710632437513,6.01074875935617,17.1236857350128,24.2957146219347,15.6239221364307,88.8376836777017,75.8369065283259,96.2244981427338,92.5357044345902,14.8944635040149,16.8721376668665,10.3264026162855,8.30148596298286,2.09868563438444,14.1957974411207,13.4372144933624,13.1560792057389,10.5453679787327,20.4539359473824,20.112383763698,17.4391740844813,17.8939239232393,6.89078356938024,9.04600191934057,20.4697671051595,22.6127869153085,21.1705308998342,63.4149260474171,37.4668097341182,31.9833689543976,15.8481681015439,28.0186071158736,44.5508849560759,37.7713309085383,5.85944283031671,16.4080422349998,9.94695113550217,4.70585190424811,4.09827290975067,6.311634589405,23.4168081434574,20.7822709000005,22.3927037637251,59.461742170451,27.2531445475558,35.36947542025,29.1644848611425,49.9751525202544,21.5628846547457,18.2883040602933,21.7608642603403,12.7715643674136,40.6469908936796,22.9226751951005,21.6582278756526,14.3644687210314,17.9856932952491,15.8457850876545,69.4631290741721,101.37960675667,47.6946850159141,83.0647744556259,70.3375313796639,35.0532129306534,38.4218305321555,8.39885859698669,9.85543349821342,10.3059231062177,37.7059299413021,30.7007271922743,8.57435594504678,10.543001812006,11.9498442259303,11.0115880999389,12.5133591323484,14.1318010595744,15.5625819521629,17.1081893536506,13.5437476344758,19.821992929098,15.757353080887,12.9878510610289,29.7574871328404,26.6235043094322,26.655120753018,64.5187167198728,51.8420902332549,11.5945795480671,259.848010848379,136.674238075258,421.508192669135,380.768980624334,150.985060951802,67.8346549236362,60.6731948377886,56.1137769942197,56.8876714961648,13.8026551381147,8.98285341900225,7.64415719119937,0,43.9476813252765,39.0174192831652,35.8922355960496,55.7217333029013,15.7952109024775,27.1649114488629,25.6758283613881,41.1028395721391,40.1270965225542,41.2980035114186,21.7539108201054,32.4219805630563,13.1013332899218,33.6916501623394,9.73071607144862,9.38247729694973,7.95029466457417,3.87900202508178,54.0536107532554,7.90508151931177,5.44561437714983,20.6920214718959,14.1381846916986,24.5960119707297,20.3312363316904,12.2828324311955,8.6925114535539,8.79580464790051,19.8159725019195,19.9458056717658,13.714010940931,11.1946471516753,6.92507674182151,11.4454412961286,18.4487613656583,69.4458124425364,17.0457780281142,15.6333431014762,17.8261508507296,11.1521565198429,7.89223390155403,9.73664274164858,10.6819965998091,16.557015727297,14.0119195406347,12.6701073712439,14.7798944297717,14.6861140726475,10.0097009721215,12.8853301613202,15.0220959577799,12.5391588095651,25.2796747432765,28.5656176897334,20.4597719564827,14.2916783049496,15.0096678387902,13.6847166710371,14.2046841351126,12.199382368339,10.181629450567,13.7195027402741,8.04820204198858,4.43708300995244,7.5697530960201,5.91002870684743,6.24229833503089,7.16379938384128,11.6361561104257,7.1129401942997,10.0939175310781,6.07137213037778,6.93879444265976,21.1560453330835,13.8637362847902,14.8631469990681,23.8404803445873,23.7986559055544,27.7972554806088,34.6210639524858,22.7773949541366,27.1753275294618,35.438264440838,40.3881638243536,38.7978533367049,18.8752075817387,25.5042898852139,26.8840718893396,20.6738012038859,16.9087798662399,14.6520056375005,13.2373363099454,15.3222464862424,9.8190147846446,10.8766843853723,18.7464887934095,17.2698600625512,17.2756029490521,158.898608118712,24.5262305402658,19.2627815210939,24.7348323623339,25.9660955377284,42.4471801164254,63.9110887971364,115.366151117775,49.2891089396108,137.006145180853,188.336350550834,167.835567398495,169.748494174321,297.032760465803,475.941338073633,285.12412112575,14.5955020231618,15.3488043534093,15.6446377384345,12.7308814331391,10.3263709246941,10.3853879613926,8.09348379012447,7.02481132288076,7.09358148477859,5.75808193086815,7.17546458958692,15.2392882685636,13.296743603674,11.8612228036839,28.6503439484617,25.0196614556606,52.1270129400178,26.2139908989496,18.4633178485961,17.2301179290539,49.8362233945093,15.4007265594668,18.9304931649754,20.3028147034252,18.7418356027535,15.7719406648684,13.8135177931084,11.3230612315533,18.2164815753702,16.9508397588561,10.2774822266096,7.39039027770156,17.458630480617,16.9162323483892,5.53815661802159,14.3524006986106,22.5666735177937,19.4224508923985,22.3719432153916,23.9528451289991,37.5033403958581,36.2773474573834,17.0562673491026,11.6330793432802,19.6073558111597,23.0706833293146,21.0837217149998,17.5330423521918,9.53230896110606,12.2441543941291,13.4533031134065,14.5749183821483,10.995094485821,13.1992925025532,12.6702745863633,11.5696680663548,32.8540391289194,12.2862601101016,18.0833286405069,32.4825918294716,15.8235138161987,29.4930202898682,31.3949264728249,40.3786613372851,20.4036585640896,22.2510362412612,15.3783792718067,13.6215332855727,10.0005044779644,8.4765805652111,9.97867862363484,10.9813523139131,7.81900777971734,9.6566502103324,7.46279858543889,17.184071124272,13.2861117304077,18.9087104427969,15.1207477150522,19.0270349373167,17.0322799722019,22.6572101926499,30.1685113397476,26.699106082371,29.422598937237,11.1841076355647,12.4012446510522,12.4098733216502,19.1931848930233,15.5560950675238,19.2448136981819,17.5714370510409,5.28107573905893,11.8485990207995,7.44501345422547,10.8712854371703,11.2331702440568,8.21628913633263,15.0016659314722,15.4066435747241,13.7716072356463,12.8899220880587,12.715606706001,7.3319224207181,10.6336459565696,9.38987984517773,6.93481940560499,8.77187810690513,9.06358290879698,9.04391311419097,5.72696820689688,12.923631866067,15.3170307828105,22.3387502957594,15.7811539382234,30.5239558570861,44.1053817310278,16.8499494325884,24.4379952150135,13.0408747049194,22.5900737046827,22.5559365888517,23.4887160510153,20.2786755165551,18.4972280338073,17.3740596399631,15.5255175053315,28.8205570063501,19.4851235863208,20.192652158321,6.01966615988225,11.9707462020309,11.6098851912811,19.4485373654635,8.38452650511929,8.45680138870065,16.4462578573195,19.9854005521727,18.2923949467335,20.2157769411038,16.4761544928656,19.2398868213798,17.6982449118078,17.4788666065293,17.8049953762401,16.1939855036245,16.1079213063349,14.8540099757053,21.4284668417719,18.1054671765309,16.8005933668854,16.5052499728184,18.8364590058384,17.4415699958794,17.5043447572515,17.4306092256854,17.7440133686589,15.7841826862706,17.9261430276538,12.3451299764702,16.7275375555086,15.4652037329635,20.0523211153148,16.2683683245264,17.5545015992839,16.4874981439044,21.2877763685322,14.8261027293326,11.6685882561994,16.7649478530832,11.5933917810211 | |phase1_expression=11.5307169915452,6.97950815278722,3.18499467572675,3.32710632437513,6.01074875935617,17.1236857350128,24.2957146219347,15.6239221364307,88.8376836777017,75.8369065283259,96.2244981427338,92.5357044345902,14.8944635040149,16.8721376668665,10.3264026162855,8.30148596298286,2.09868563438444,14.1957974411207,13.4372144933624,13.1560792057389,10.5453679787327,20.4539359473824,20.112383763698,17.4391740844813,17.8939239232393,6.89078356938024,9.04600191934057,20.4697671051595,22.6127869153085,21.1705308998342,63.4149260474171,37.4668097341182,31.9833689543976,15.8481681015439,28.0186071158736,44.5508849560759,37.7713309085383,5.85944283031671,16.4080422349998,9.94695113550217,4.70585190424811,4.09827290975067,6.311634589405,23.4168081434574,20.7822709000005,22.3927037637251,59.461742170451,27.2531445475558,35.36947542025,29.1644848611425,49.9751525202544,21.5628846547457,18.2883040602933,21.7608642603403,12.7715643674136,40.6469908936796,22.9226751951005,21.6582278756526,14.3644687210314,17.9856932952491,15.8457850876545,69.4631290741721,101.37960675667,47.6946850159141,83.0647744556259,70.3375313796639,35.0532129306534,38.4218305321555,8.39885859698669,9.85543349821342,10.3059231062177,37.7059299413021,30.7007271922743,8.57435594504678,10.543001812006,11.9498442259303,11.0115880999389,12.5133591323484,14.1318010595744,15.5625819521629,17.1081893536506,13.5437476344758,19.821992929098,15.757353080887,12.9878510610289,29.7574871328404,26.6235043094322,26.655120753018,64.5187167198728,51.8420902332549,11.5945795480671,259.848010848379,136.674238075258,421.508192669135,380.768980624334,150.985060951802,67.8346549236362,60.6731948377886,56.1137769942197,56.8876714961648,13.8026551381147,8.98285341900225,7.64415719119937,0,43.9476813252765,39.0174192831652,35.8922355960496,55.7217333029013,15.7952109024775,27.1649114488629,25.6758283613881,41.1028395721391,40.1270965225542,41.2980035114186,21.7539108201054,32.4219805630563,13.1013332899218,33.6916501623394,9.73071607144862,9.38247729694973,7.95029466457417,3.87900202508178,54.0536107532554,7.90508151931177,5.44561437714983,20.6920214718959,14.1381846916986,24.5960119707297,20.3312363316904,12.2828324311955,8.6925114535539,8.79580464790051,19.8159725019195,19.9458056717658,13.714010940931,11.1946471516753,6.92507674182151,11.4454412961286,18.4487613656583,69.4458124425364,17.0457780281142,15.6333431014762,17.8261508507296,11.1521565198429,7.89223390155403,9.73664274164858,10.6819965998091,16.557015727297,14.0119195406347,12.6701073712439,14.7798944297717,14.6861140726475,10.0097009721215,12.8853301613202,15.0220959577799,12.5391588095651,25.2796747432765,28.5656176897334,20.4597719564827,14.2916783049496,15.0096678387902,13.6847166710371,14.2046841351126,12.199382368339,10.181629450567,13.7195027402741,8.04820204198858,4.43708300995244,7.5697530960201,5.91002870684743,6.24229833503089,7.16379938384128,11.6361561104257,7.1129401942997,10.0939175310781,6.07137213037778,6.93879444265976,21.1560453330835,13.8637362847902,14.8631469990681,23.8404803445873,23.7986559055544,27.7972554806088,34.6210639524858,22.7773949541366,27.1753275294618,35.438264440838,40.3881638243536,38.7978533367049,18.8752075817387,25.5042898852139,26.8840718893396,20.6738012038859,16.9087798662399,14.6520056375005,13.2373363099454,15.3222464862424,9.8190147846446,10.8766843853723,18.7464887934095,17.2698600625512,17.2756029490521,158.898608118712,24.5262305402658,19.2627815210939,24.7348323623339,25.9660955377284,42.4471801164254,63.9110887971364,115.366151117775,49.2891089396108,137.006145180853,188.336350550834,167.835567398495,169.748494174321,297.032760465803,475.941338073633,285.12412112575,14.5955020231618,15.3488043534093,15.6446377384345,12.7308814331391,10.3263709246941,10.3853879613926,8.09348379012447,7.02481132288076,7.09358148477859,5.75808193086815,7.17546458958692,15.2392882685636,13.296743603674,11.8612228036839,28.6503439484617,25.0196614556606,52.1270129400178,26.2139908989496,18.4633178485961,17.2301179290539,49.8362233945093,15.4007265594668,18.9304931649754,20.3028147034252,18.7418356027535,15.7719406648684,13.8135177931084,11.3230612315533,18.2164815753702,16.9508397588561,10.2774822266096,7.39039027770156,17.458630480617,16.9162323483892,5.53815661802159,14.3524006986106,22.5666735177937,19.4224508923985,22.3719432153916,23.9528451289991,37.5033403958581,36.2773474573834,17.0562673491026,11.6330793432802,19.6073558111597,23.0706833293146,21.0837217149998,17.5330423521918,9.53230896110606,12.2441543941291,13.4533031134065,14.5749183821483,10.995094485821,13.1992925025532,12.6702745863633,11.5696680663548,32.8540391289194,12.2862601101016,18.0833286405069,32.4825918294716,15.8235138161987,29.4930202898682,31.3949264728249,40.3786613372851,20.4036585640896,22.2510362412612,15.3783792718067,13.6215332855727,10.0005044779644,8.4765805652111,9.97867862363484,10.9813523139131,7.81900777971734,9.6566502103324,7.46279858543889,17.184071124272,13.2861117304077,18.9087104427969,15.1207477150522,19.0270349373167,17.0322799722019,22.6572101926499,30.1685113397476,26.699106082371,29.422598937237,11.1841076355647,12.4012446510522,12.4098733216502,19.1931848930233,15.5560950675238,19.2448136981819,17.5714370510409,5.28107573905893,11.8485990207995,7.44501345422547,10.8712854371703,11.2331702440568,8.21628913633263,15.0016659314722,15.4066435747241,13.7716072356463,12.8899220880587,12.715606706001,7.3319224207181,10.6336459565696,9.38987984517773,6.93481940560499,8.77187810690513,9.06358290879698,9.04391311419097,5.72696820689688,12.923631866067,15.3170307828105,22.3387502957594,15.7811539382234,30.5239558570861,44.1053817310278,16.8499494325884,24.4379952150135,13.0408747049194,22.5900737046827,22.5559365888517,23.4887160510153,20.2786755165551,18.4972280338073,17.3740596399631,15.5255175053315,28.8205570063501,19.4851235863208,20.192652158321,6.01966615988225,11.9707462020309,11.6098851912811,19.4485373654635,8.38452650511929,8.45680138870065,16.4462578573195,19.9854005521727,18.2923949467335,20.2157769411038,16.4761544928656,19.2398868213798,17.6982449118078,17.4788666065293,17.8049953762401,16.1939855036245,16.1079213063349,14.8540099757053,21.4284668417719,18.1054671765309,16.8005933668854,16.5052499728184,18.8364590058384,17.4415699958794,17.5043447572515,17.4306092256854,17.7440133686589,15.7841826862706,17.9261430276538,12.3451299764702,16.7275375555086,15.4652037329635,20.0523211153148,16.2683683245264,17.5545015992839,16.4874981439044,21.2877763685322,14.8261027293326,11.6685882561994,16.7649478530832,11.5933917810211 | ||
|short_description=p2@Sigmar1 | |||
}} | }} |
Latest revision as of 23:39, 26 September 2015
Short description: | p2@Sigmar1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sigmar1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 12bp_to_NM_011014, uc008sjk.1, uc008sjl.1, uc012dcg.1_5end |
EntrezGene: | Sigmar1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 1.79e-09 | 54 |
connective tissue cell | 8.61e-07 | 46 |
mesenchymal cell | 8.61e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 8.78e-12 | 23 |
sac | 8.78e-12 | 23 |
liver | 2.87e-11 | 22 |
epithelial sac | 2.87e-11 | 22 |
digestive gland | 2.87e-11 | 22 |
epithelium of foregut-midgut junction | 2.87e-11 | 22 |
anatomical boundary | 2.87e-11 | 22 |
hepatobiliary system | 2.87e-11 | 22 |
foregut-midgut junction | 2.87e-11 | 22 |
hepatic diverticulum | 2.87e-11 | 22 |
liver primordium | 2.87e-11 | 22 |
septum transversum | 2.87e-11 | 22 |
liver bud | 2.87e-11 | 22 |
exocrine gland | 5.15e-11 | 25 |
exocrine system | 5.15e-11 | 25 |
trunk mesenchyme | 2.70e-10 | 45 |
connective tissue | 8.61e-07 | 46 |