FFCP PHASE1:Mm9::chr7:106312893..106312899,+: Difference between revisions
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|id=chr7:106312893..106312899,+
|short_description=p@chr7:106312893..106312899,+
|description=CAGE_peak_at_chr7:106312893..106312899,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=550 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:106312893..106312899,+ | |||
|description=CAGE_peak_at_chr7:106312893..106312899,+ | |||
|id=chr7:106312893..106312899,+ | |||
|ontology_enrichment_celltype=CL:0000063!8.41e-10!66;CL:0000075!1.18e-08!7;CL:0000066!3.08e-08!25;CL:0000239!3.31e-08!6;CL:0000677!3.31e-08!6;CL:0000212!3.31e-08!6;CL:0000584!3.31e-08!6;CL:0002076!2.10e-07!15;CL:0000548!7.31e-07!115;CL:0000004!7.31e-07!115;CL:0000255!7.31e-07!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.73e-16,6;CL:0000677,2.73e-16,6;CL:0000584,2.73e-16,6;CL:0002076,4.97e-14,15;CL:0000075,5.29e-14,7;CL:0002563,6.05e-11,9;CL:0002251,6.05e-11,9;CL:0000223,1.94e-10,20;CL:0002293,7.76e-09,3;CL:0000066,2.82e-08,25;CL:0000057,2.79e-07,1;CL:0000632,2.79e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.59e-09!15;UBERON:0001242!4.47e-07!13;UBERON:0000060!4.47e-07!13;UBERON:0001262!4.47e-07!13;UBERON:0004786!4.47e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.42e-19,15;UBERON:0001962,2.78e-13,2;UBERON:0001961,2.78e-13,2;UBERON:0001744,2.78e-13,2;UBERON:0004923,8.78e-12,24;UBERON:0001242,1.60e-11,13;UBERON:0001262,1.60e-11,13;UBERON:0004786,1.60e-11,13;UBERON:0003350,6.05e-11,9;UBERON:0004808,6.05e-11,9;UBERON:0001277,6.05e-11,9;UBERON:0002465,3.75e-09,3;UBERON:0000485,5.44e-09,11;UBERON:0003199,1.59e-07,1 | |||
|phase1_expression=0.160148847104794,1.04692622291808,0.454999239389536,7.86406949397758,7.51343594919521,0.16787927191189,1.63528848416868,0,0.140788722151667,0.468129052643987,0.34243593645101,0.159544317990673,0.171200729931206,0,0,0,0,0.315462165358238,0.137114433605739,0.42438965179803,0,0,0.261199789138935,4.47978783821539,5.50582274561208,0,0.86152399231815,0.430942465371778,2.66032787238923,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605809546665472,0.302286240427142,0,2.58127163094416,0,0.539703191637817,0,0,0,0.170430322578058,1.55871602761721,1.7666978725517,0.14084341977668,1.28326477414318,5.09610479413291,0,0.432982082022428,0.253359865475099,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,1.08781136763742,0.491764273019036,0.275936746304732,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0.590603785761546,0.307435147943927,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.453460767230423,0.887943813496259,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0.561142271657738,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0.160148847104794,1.04692622291808,0.454999239389536,7.86406949397758,7.51343594919521,0.16787927191189,1.63528848416868,0,0.140788722151667,0.468129052643987,0.34243593645101,0.159544317990673,0.171200729931206,0,0,0,0,0.315462165358238,0.137114433605739,0.42438965179803,0,0,0.261199789138935,4.47978783821539,5.50582274561208,0,0.86152399231815,0.430942465371778,2.66032787238923,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605809546665472,0.302286240427142,0,2.58127163094416,0,0.539703191637817,0,0,0,0.170430322578058,1.55871602761721,1.7666978725517,0.14084341977668,1.28326477414318,5.09610479413291,0,0.432982082022428,0.253359865475099,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,1.08781136763742,0.491764273019036,0.275936746304732,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0.590603785761546,0.307435147943927,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.453460767230423,0.887943813496259,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0.561142271657738,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr7:106312893..106312899,+ | |||
}} | }} |
Latest revision as of 20:37, 3 August 2015
Short description: | p@chr7:106312893..106312899, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:106312893..106312899, + |
Coexpression cluster: | MCL_coexpression_mm9:550 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.73e-16 | 6 |
gut absorptive cell | 2.73e-16 | 6 |
enterocyte | 2.73e-16 | 6 |
endo-epithelial cell | 4.97e-14 | 15 |
columnar/cuboidal epithelial cell | 5.29e-14 | 7 |
intestinal epithelial cell | 6.05e-11 | 9 |
epithelial cell of alimentary canal | 6.05e-11 | 9 |
endodermal cell | 1.94e-10 | 20 |
epithelial cell of thymus | 7.76e-09 | 3 |
epithelial cell | 2.82e-08 | 25 |
fibroblast | 2.79e-07 | 1 |
hepatic stellate cell | 2.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.42e-19 | 15 |
gut-associated lymphoid tissue | 2.78e-13 | 2 |
mucosa-associated lymphoid tissue | 2.78e-13 | 2 |
lymphoid tissue | 2.78e-13 | 2 |
organ component layer | 8.78e-12 | 24 |
intestinal mucosa | 1.60e-11 | 13 |
wall of intestine | 1.60e-11 | 13 |
gastrointestinal system mucosa | 1.60e-11 | 13 |
epithelium of mucosa | 6.05e-11 | 9 |
gastrointestinal system epithelium | 6.05e-11 | 9 |
intestinal epithelium | 6.05e-11 | 9 |
lymphoid system | 3.75e-09 | 3 |
simple columnar epithelium | 5.44e-09 | 11 |
egg chamber | 1.59e-07 | 1 |